RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 ZBED6CLQ96FA7 236 aaPredicted RBP6.16□□□□□ -1.42
CDCA3-209ENST00000544610 ITCHQ96J02 903 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 PPP1R36Q96LQ0 422 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 CCDC115Q96NT0 180 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 OR1F2PQ96R84 312 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 F2RL3Q96RI0 385 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 HBEGFQ99075 208 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 NDC1Q9BTX1 674 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 SPATA9Q9BWV2 254 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 MUC13Q9H3R2 512 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 WDR54Q9H977 334 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 ANKHQ9HCJ1 492 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 SLC22A11Q9NSA0 550 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 ARL8BQ9NVJ2 186 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 CCDC167Q9P0B6 97 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 KCMF1Q9P0J7 381 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 ABCD2Q9UBJ2 740 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 FBXL4Q9UKA2 621 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 DAPP1Q9UN19 280 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 CORO2BQ9UQ03 480 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 ENTPD4Q9Y227 616 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 MRPS33Q9Y291 106 aaKnown RBP6.16□□□□□ -1.42
CDCA3-209ENST00000544610 POLR3HQ9Y535 204 aaPredicted RBP6.16□□□□□ -1.42
CDCA3-209ENST00000544610 ASB4Q9Y574 426 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 SPTBN1Q01082 2364 aaKnown RBP6.16□□□□□ -1.42
CDCA3-209ENST00000544610 CENPEQ02224 2701 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 NOTCH2Q04721 2471 aa6.16□□□□□ -1.42
CDCA3-209ENST00000544610 FBN2P35556 2912 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 CROCCQ5TZA2 2017 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 A0A096LPI6 279 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 A0A0J9YVX5 310 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 TMEM238LA0A1B0GVL6 79 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 A0A1B0GX78 115 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 GABRR3A8MPY1 467 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 B2RBV5 119 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 SOCS6O14544 535 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 MRASO14807 208 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 PROM1O43490 865 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 SCN2BO60939 215 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 KLHL18O94889 574 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 BMP10O95393 424 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 ALBP02768 609 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 PF4P02776 101 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 PIM1P11309 404 aaPredicted RBP6.15□□□□□ -1.42
CDCA3-209ENST00000544610 PRF1P14222 555 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 TACR1P25103 407 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 ITGA3P26006 1051 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 ELAVL4P26378 380 aaKnown RBP6.15□□□□□ -1.42
CDCA3-209ENST00000544610 IL12AP29459 219 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 AVPR1BP47901 424 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 TAS2R50P59544 299 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 NCALDP61601 193 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 UFM1P61960 85 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 ACTN3Q08043 901 aaPredicted RBP6.15□□□□□ -1.42
CDCA3-209ENST00000544610 ZNF169Q14929 603 aaPredicted RBP6.15□□□□□ -1.42
CDCA3-209ENST00000544610 FXNQ16595 210 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 FAM174BQ3ZCQ3 159 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 MMEL1Q495T6 779 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 TOR1AIP1Q5JTV8 583 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 WASHC2DQ5SRD0 308 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 NDUFAF5Q5TEU4 345 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 AGAP7PQ5VUJ5 663 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 OR52E8Q6IFG1 317 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 SLC48A1Q6P1K1 146 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 BHLHB9Q6PI77 547 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 PAOXQ6QHF9 649 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 TMEM64Q6YI46 380 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 BNC2Q6ZN30 1099 aaPredicted RBP6.15□□□□□ -1.42
CDCA3-209ENST00000544610 COX15Q7KZN9 410 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 OVCH1Q7RTY7 1134 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 ZNF595Q8IYB9 648 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 FAM47BQ8NA70 645 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 RBM15BQ8NDT2 890 aaKnown RBP6.15□□□□□ -1.42
CDCA3-209ENST00000544610 ZFP28Q8NHY6 868 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 FAR1Q8WVX9 515 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 GTF2H4Q92759 462 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 PPCDCQ96CD2 204 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 RHOVQ96L33 236 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 TEX37Q96LM6 180 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 AGAP4Q96P64 663 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 OR52E6Q96RD3 313 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 SLX1AQ9BQ83 275 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 GPATCH1Q9BRR8 931 aaKnown RBP6.15□□□□□ -1.42
CDCA3-209ENST00000544610 PELOQ9BRX2 385 aaKnown RBP6.15□□□□□ -1.42
CDCA3-209ENST00000544610 C1orf50Q9BV19 199 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 AICDAQ9GZX7 198 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 SLC26A1Q9H2B4 701 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 RASSF4Q9H2L5 321 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 RAD21L1Q9H4I0 556 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 LIN7BQ9HAP6 207 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 SPAG4Q9NPE6 437 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 MIEF1Q9NQG6 463 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 GIMAP4Q9NUV9 329 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 IRAK4Q9NWZ3 460 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 THUMPD1Q9NXG2 353 aaKnown RBP6.15□□□□□ -1.42
CDCA3-209ENST00000544610 NTMQ9P121 344 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 ZNF282Q9UDV7 671 aaPredicted RBP6.15□□□□□ -1.42
CDCA3-209ENST00000544610 BCAP29Q9UHQ4 241 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 OSGIN2Q9Y236 505 aa6.15□□□□□ -1.42
CDCA3-209ENST00000544610 MMACHCQ9Y4U1 282 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms