RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 SCN2BO60939 215 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 BCAS2O75934 225 aaPredicted RBP12.64□□□□□ -0.39
SP140-213ENST00000543928 PDGFAP04085 211 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 IL6P05231 212 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 ABCB1P08183 1280 aaPredicted RBP12.64□□□□□ -0.39
SP140-213ENST00000543928 POLR2JP52435 117 aaKnown RBP12.64□□□□□ -0.39
SP140-213ENST00000543928 MLF1P58340 268 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 MFAP5Q13361 173 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 EBPQ15125 230 aaKnown RBP12.64□□□□□ -0.39
SP140-213ENST00000543928 MEP1AQ16819 746 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 ACER2Q5QJU3 275 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 ABHD17BQ5VST6 288 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 TCTN3Q6NUS6 607 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 C16orf47Q6ZP98 133 aaPredicted RBP12.64□□□□□ -0.39
SP140-213ENST00000543928 ANKRD46Q86W74 232 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 FUNDC1Q8IVP5 155 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 CLECL1Q8IZS7 167 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 OR2L13Q8N349 312 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 EXD3Q8N9H8 876 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 VPS37AQ8NEZ2 397 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 OR5L2Q8NGL0 311 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 C16orf52Q8NHV5 167 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 C9orf43Q8TAL5 461 aaPredicted RBP12.64□□□□□ -0.39
SP140-213ENST00000543928 NUBPLQ8TB37 319 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 OR52E6Q96RD3 313 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 WWTR1Q9GZV5 400 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 ZBTB20Q9HC78 741 aaPredicted RBP12.64□□□□□ -0.39
SP140-213ENST00000543928 SIRT3Q9NTG7 399 aaPredicted RBP12.64□□□□□ -0.39
SP140-213ENST00000543928 DDX18Q9NVP1 670 aaKnown RBP12.64□□□□□ -0.39
SP140-213ENST00000543928 FAM120CQ9NX05 1096 aaKnown RBP12.64□□□□□ -0.39
SP140-213ENST00000543928 STMN3Q9NZ72 180 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 CCDC167Q9P0B6 97 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 ADAM21Q9UKJ8 722 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 C19orf53Q9UNZ5 99 aaPredicted RBP12.64□□□□□ -0.39
SP140-213ENST00000543928 TP53TG5Q9Y2B4 290 aa12.64□□□□□ -0.39
SP140-213ENST00000543928 NUP214P35658 2090 aaPredicted RBP12.64□□□□□ -0.39
SP140-213ENST00000543928 TNRC6AQ8NDV7 1962 aaKnown RBP12.63□□□□□ -0.39
SP140-213ENST00000543928 PRSS51A0A1B0GVH4 220 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 C2orf92A0A1B0GVN3 265 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 WWP2O00308 870 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 UPK1AO00322 258 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 SNX3O60493 162 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 COQ9O75208 318 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 NME6O75414 186 aaPredicted RBP12.63□□□□□ -0.39
SP140-213ENST00000543928 CPSF4O95639 269 aaKnown RBP12.63□□□□□ -0.39
SP140-213ENST00000543928 IFI6P09912 130 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 EMDP50402 254 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 HBA1P69905 142 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 TIGD2Q4W5G0 525 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 AGKQ53H12 422 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 HLA-DQA1Q5Y7H0 255 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 PCSK4Q6UW60 755 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 LGI4Q8N135 537 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 BEST3Q8N1M1 668 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 ARMC10Q8N2F6 343 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 OR4A15Q8NGL6 344 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 PSMA8Q8TAA3 256 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 LMF1Q96S06 567 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 EPN3Q9H201 632 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 CXorf36Q9H7Y0 433 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 NEUROD4Q9HD90 331 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 ZNF71Q9NQZ8 489 aaPredicted RBP12.63□□□□□ -0.39
SP140-213ENST00000543928 TMEM45AQ9NWC5 275 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 TAS2R9Q9NYW1 312 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 MYOTQ9UBF9 498 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 PRODH2Q9UF12 536 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 BTNL2Q9UIR0 455 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 PCDHGB4Q9UN71 923 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 CFL2Q9Y281 166 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 DTX4Q9Y2E6 619 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 ZNF451Q9Y4E5 1061 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 PCDHGB7Q9Y5F8 929 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 SNX8Q9Y5X2 465 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 ATMQ13315 3056 aa12.63□□□□□ -0.39
SP140-213ENST00000543928 CPAMD8Q8IZJ3 1885 aa12.62□□□□□ -0.39
SP140-213ENST00000543928 NR5A2O00482 541 aa12.62□□□□□ -0.39
SP140-213ENST00000543928 FCHO1O14526 889 aa12.62□□□□□ -0.39
SP140-213ENST00000543928 EMC8O43402 210 aa12.62□□□□□ -0.39
SP140-213ENST00000543928 SHOX2O60902 331 aaPredicted RBP12.62□□□□□ -0.39
SP140-213ENST00000543928 ITGA10O75578 1167 aa12.62□□□□□ -0.39
SP140-213ENST00000543928 OR2J2O76002 312 aa12.62□□□□□ -0.39
SP140-213ENST00000543928 CD1EP15812 388 aa12.62□□□□□ -0.39
SP140-213ENST00000543928 ST13P50502 369 aaKnown RBP12.62□□□□□ -0.39
SP140-213ENST00000543928 KCNK10P57789 538 aa12.62□□□□□ -0.39
SP140-213ENST00000543928 ZNF155Q12901 538 aaPredicted RBP12.62□□□□□ -0.39
SP140-213ENST00000543928 UBAP2LQ14157 1087 aaKnown RBP12.62□□□□□ -0.39
SP140-213ENST00000543928 RCAN2Q14206 197 aa12.62□□□□□ -0.39
SP140-213ENST00000543928 LY6DQ14210 128 aa12.62□□□□□ -0.39
SP140-213ENST00000543928 SPDYE7PQ495Y7 208 aa12.62□□□□□ -0.39
SP140-213ENST00000543928 LACTB2Q53H82 288 aaPredicted RBP12.62□□□□□ -0.39
SP140-213ENST00000543928 BLOC1S3Q6QNY0 202 aa12.62□□□□□ -0.39
SP140-213ENST00000543928 IGFL2Q6UWQ7 119 aa12.62□□□□□ -0.39
SP140-213ENST00000543928 ASB18Q6ZVZ8 466 aa12.62□□□□□ -0.39
SP140-213ENST00000543928 SZRD1Q7Z422 152 aa12.62□□□□□ -0.39
SP140-213ENST00000543928 CPSF7Q8N684 471 aaKnown RBP12.62□□□□□ -0.39
SP140-213ENST00000543928 ADIPOR1Q96A54 375 aa12.62□□□□□ -0.39
SP140-213ENST00000543928 VPS33AQ96AX1 596 aa12.62□□□□□ -0.39
SP140-213ENST00000543928 FAM120BQ96EK7 910 aaKnown RBP12.62□□□□□ -0.39
SP140-213ENST00000543928 WBP1Q96G27 269 aa12.62□□□□□ -0.39
SP140-213ENST00000543928 CCDC115Q96NT0 180 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms