RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 PLOD3O60568 738 aa13.97□□□□□ -0.17
CD9-210ENST00000543916 PRAMEF2O60811 474 aa13.97□□□□□ -0.17
CD9-210ENST00000543916 NADKO95544 446 aaPredicted RBP13.97□□□□□ -0.17
CD9-210ENST00000543916 GPX3P22352 226 aa13.97□□□□□ -0.17
CD9-210ENST00000543916 IL12AP29459 219 aa13.97□□□□□ -0.17
CD9-210ENST00000543916 TRHRP34981 398 aaPredicted RBP13.97□□□□□ -0.17
CD9-210ENST00000543916 EMDP50402 254 aa13.97□□□□□ -0.17
CD9-210ENST00000543916 CDK9P50750 372 aaKnown RBP13.97□□□□□ -0.17
CD9-210ENST00000543916 SSR4P51571 173 aa13.97□□□□□ -0.17
CD9-210ENST00000543916 MANFP55145 182 aaKnown RBP13.97□□□□□ -0.17
CD9-210ENST00000543916 PGS1Q32NB8 556 aa13.97□□□□□ -0.17
CD9-210ENST00000543916 CGB2Q6NT52 195 aa13.97□□□□□ -0.17
CD9-210ENST00000543916 ZNF227Q86WZ6 799 aa13.97□□□□□ -0.17
CD9-210ENST00000543916 MDS2Q8NDY4 140 aa13.97□□□□□ -0.17
CD9-210ENST00000543916 ZFP28Q8NHY6 868 aa13.97□□□□□ -0.17
CD9-210ENST00000543916 ADIPOR1Q96A54 375 aa13.97□□□□□ -0.17
CD9-210ENST00000543916 PNPLA2Q96AD5 504 aa13.97□□□□□ -0.17
CD9-210ENST00000543916 TESCQ96BS2 214 aa13.97□□□□□ -0.17
CD9-210ENST00000543916 ERP27Q96DN0 273 aa13.97□□□□□ -0.17
CD9-210ENST00000543916 ELP4Q96EB1 424 aa13.97□□□□□ -0.17
CD9-210ENST00000543916 ZBED6CLQ96FA7 236 aaPredicted RBP13.97□□□□□ -0.17
CD9-210ENST00000543916 PRPF18Q99633 342 aaKnown RBP13.97□□□□□ -0.17
CD9-210ENST00000543916 DUSP26Q9BV47 211 aa13.97□□□□□ -0.17
CD9-210ENST00000543916 ITPAQ9BY32 194 aa13.97□□□□□ -0.17
CD9-210ENST00000543916 BHLHE41Q9C0J9 482 aaPredicted RBP13.97□□□□□ -0.17
CD9-210ENST00000543916 CLMPQ9H6B4 373 aa13.97□□□□□ -0.17
CD9-210ENST00000543916 ACSS1Q9NUB1 689 aaPredicted RBP13.97□□□□□ -0.17
CD9-210ENST00000543916 ATAD3AQ9NVI7 634 aa13.97□□□□□ -0.17
CD9-210ENST00000543916 DCTN4Q9UJW0 460 aa13.97□□□□□ -0.17
CD9-210ENST00000543916 MAPRE3Q9UPY8 281 aa13.97□□□□□ -0.17
CD9-210ENST00000543916 YARS2Q9Y2Z4 477 aaKnown RBP13.97□□□□□ -0.17
CD9-210ENST00000543916 SMG1Q96Q15 3661 aaKnown RBP13.97□□□□□ -0.17
CD9-210ENST00000543916 SPENQ96T58 3664 aaKnown RBP13.97□□□□□ -0.17
CD9-210ENST00000543916 A0A087WV62 115 aa13.96□□□□□ -0.17
CD9-210ENST00000543916 A0A1W2PRB8 838 aa13.96□□□□□ -0.17
CD9-210ENST00000543916 EIF4E1BA6NMX2 242 aaKnown RBP13.96□□□□□ -0.17
CD9-210ENST00000543916 C9JVG2 144 aa13.96□□□□□ -0.17
CD9-210ENST00000543916 E9PBE3 544 aa13.96□□□□□ -0.17
CD9-210ENST00000543916 UPK1AO00322 258 aa13.96□□□□□ -0.17
CD9-210ENST00000543916 UBDO15205 165 aa13.96□□□□□ -0.17
CD9-210ENST00000543916 NEURL1O76050 574 aa13.96□□□□□ -0.17
CD9-210ENST00000543916 SLITRK5O94991 958 aa13.96□□□□□ -0.17
CD9-210ENST00000543916 OR6B1O95007 311 aa13.96□□□□□ -0.17
CD9-210ENST00000543916 VIMP08670 466 aaKnown RBP13.96□□□□□ -0.17
CD9-210ENST00000543916 IDO1P14902 403 aa13.96□□□□□ -0.17
CD9-210ENST00000543916 DDX5P17844 614 aaKnown RBP13.96□□□□□ -0.17
CD9-210ENST00000543916 SOX3P41225 446 aa13.96□□□□□ -0.17
CD9-210ENST00000543916 HLCSP50747 726 aa13.96□□□□□ -0.17
CD9-210ENST00000543916 CLNS1AP54105 237 aaKnown RBP13.96□□□□□ -0.17
CD9-210ENST00000543916 WNT3P56703 355 aa13.96□□□□□ -0.17
CD9-210ENST00000543916 PHC1P78364 1004 aa13.96□□□□□ -0.17
CD9-210ENST00000543916 OC90Q02509 493 aaPredicted RBP13.96□□□□□ -0.17
CD9-210ENST00000543916 ZNF169Q14929 603 aaPredicted RBP13.96□□□□□ -0.17
CD9-210ENST00000543916 OR1C1Q15619 314 aa13.96□□□□□ -0.17
CD9-210ENST00000543916 GSTA3Q16772 222 aa13.96□□□□□ -0.17
CD9-210ENST00000543916 PIGGQ5H8A4 983 aa13.96□□□□□ -0.17
CD9-210ENST00000543916 OR4F3Q6IEY1 312 aa13.96□□□□□ -0.17
CD9-210ENST00000543916 OR2L13Q8N349 312 aa13.96□□□□□ -0.17
CD9-210ENST00000543916 MAGED4Q96JG8 741 aa13.96□□□□□ -0.17
CD9-210ENST00000543916 CCDC28BQ9BUN5 200 aa13.96□□□□□ -0.17
CD9-210ENST00000543916 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.96□□□□□ -0.17
CD9-210ENST00000543916 TRIM45Q9H8W5 580 aaPredicted RBP13.96□□□□□ -0.17
CD9-210ENST00000543916 SIRT3Q9NTG7 399 aaPredicted RBP13.96□□□□□ -0.17
CD9-210ENST00000543916 ANAPC2Q9UJX6 822 aa13.96□□□□□ -0.17
CD9-210ENST00000543916 C19orf53Q9UNZ5 99 aaPredicted RBP13.96□□□□□ -0.17
CD9-210ENST00000543916 HEMK1Q9Y5R4 338 aaPredicted RBP13.96□□□□□ -0.17
CD9-210ENST00000543916 BCAS2O75934 225 aaPredicted RBP13.95□□□□□ -0.18
CD9-210ENST00000543916 SORBS2O94875 1100 aaKnown RBP13.95□□□□□ -0.18
CD9-210ENST00000543916 PSMG1O95456 288 aa13.95□□□□□ -0.18
CD9-210ENST00000543916 C6orf47O95873 294 aa13.95□□□□□ -0.18
CD9-210ENST00000543916 IFI6P09912 130 aa13.95□□□□□ -0.18
CD9-210ENST00000543916 GPC1P35052 558 aa13.95□□□□□ -0.18
CD9-210ENST00000543916 CASRP41180 1078 aa13.95□□□□□ -0.18
CD9-210ENST00000543916 NR0B1P51843 470 aaKnown RBP13.95□□□□□ -0.18
CD9-210ENST00000543916 MLC1Q15049 377 aa13.95□□□□□ -0.18
CD9-210ENST00000543916 TLR1Q15399 786 aa13.95□□□□□ -0.18
CD9-210ENST00000543916 NNATQ16517 81 aa13.95□□□□□ -0.18
CD9-210ENST00000543916 PDCD4Q53EL6 469 aaKnown RBP13.95□□□□□ -0.18
CD9-210ENST00000543916 SPANXN4Q5MJ08 99 aa13.95□□□□□ -0.18
CD9-210ENST00000543916 HLA-DQA1Q5Y7H0 255 aa13.95□□□□□ -0.18
CD9-210ENST00000543916 SPINK14Q6IE38 97 aa13.95□□□□□ -0.18
CD9-210ENST00000543916 LYPD8Q6UX82 237 aa13.95□□□□□ -0.18
CD9-210ENST00000543916 TMEM156Q8N614 296 aa13.95□□□□□ -0.18
CD9-210ENST00000543916 NATD1Q8N6N6 113 aa13.95□□□□□ -0.18
CD9-210ENST00000543916 OR8J2Q8NGG1 315 aa13.95□□□□□ -0.18
CD9-210ENST00000543916 STON2Q8WXE9 905 aa13.95□□□□□ -0.18
CD9-210ENST00000543916 ASB15Q8WXK1 588 aa13.95□□□□□ -0.18
CD9-210ENST00000543916 TP53INP1Q96A56 240 aa13.95□□□□□ -0.18
CD9-210ENST00000543916 HES7Q9BYE0 225 aa13.95□□□□□ -0.18
CD9-210ENST00000543916 NXF5Q9H1B4 397 aaKnown RBP13.95□□□□□ -0.18
CD9-210ENST00000543916 FOLH1BQ9HBA9 442 aa13.95□□□□□ -0.18
CD9-210ENST00000543916 SDR39U1Q9NRG7 319 aaPredicted RBP13.95□□□□□ -0.18
CD9-210ENST00000543916 DDX18Q9NVP1 670 aaKnown RBP13.95□□□□□ -0.18
CD9-210ENST00000543916 LRFN1Q9P244 771 aa13.95□□□□□ -0.18
CD9-210ENST00000543916 PRODH2Q9UF12 536 aa13.95□□□□□ -0.18
CD9-210ENST00000543916 TRAV17A0A0B4J275 112 aa13.94□□□□□ -0.18
CD9-210ENST00000543916 B8ZZF3 427 aa13.94□□□□□ -0.18
CD9-210ENST00000543916 CDK2AP1O14519 115 aa13.94□□□□□ -0.18
CD9-210ENST00000543916 SUV39H1O43463 412 aa13.94□□□□□ -0.18
CD9-210ENST00000543916 SCN2BO60939 215 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms