RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 DCAF10Q5QP82 559 aa21.51■■□□□ 1.03
HOMER3-205ENST00000542541 LRIF1Q5T3J3 769 aa21.51■■□□□ 1.03
HOMER3-205ENST00000542541 SZRD1Q7Z422 152 aa21.51■■□□□ 1.03
HOMER3-205ENST00000542541 APCDD1LQ8NCL9 501 aa21.51■■□□□ 1.03
HOMER3-205ENST00000542541 NSL1Q96IY1 281 aa21.51■■□□□ 1.03
HOMER3-205ENST00000542541 SEMA4CQ9C0C4 833 aa21.51■■□□□ 1.03
HOMER3-205ENST00000542541 MMP25Q9NPA2 562 aa21.51■■□□□ 1.03
HOMER3-205ENST00000542541 ZCCHC3Q9NUD5 404 aaKnown RBP21.51■■□□□ 1.03
HOMER3-205ENST00000542541 ARL8BQ9NVJ2 186 aa21.51■■□□□ 1.03
HOMER3-205ENST00000542541 PRODH2Q9UF12 536 aa21.51■■□□□ 1.03
HOMER3-205ENST00000542541 A0A087WV48 116 aa21.5■■□□□ 1.03
HOMER3-205ENST00000542541 OR6C76A6NM76 312 aa21.5■■□□□ 1.03
HOMER3-205ENST00000542541 CBX7O95931 251 aa21.5■■□□□ 1.03
HOMER3-205ENST00000542541 GSNP06396 782 aa21.5■■□□□ 1.03
HOMER3-205ENST00000542541 ESRRAP11474 423 aaPredicted RBP21.5■■□□□ 1.03
HOMER3-205ENST00000542541 SOX18P35713 384 aa21.5■■□□□ 1.03
HOMER3-205ENST00000542541 CDKN2CP42773 168 aa21.5■■□□□ 1.03
HOMER3-205ENST00000542541 SLC37A1P57057 533 aa21.5■■□□□ 1.03
HOMER3-205ENST00000542541 GABPB1Q06547 395 aaPredicted RBP21.5■■□□□ 1.03
HOMER3-205ENST00000542541 EXOSC7Q15024 291 aaKnown RBP21.5■■□□□ 1.03
HOMER3-205ENST00000542541 ATP1A1-AS1Q5TC04 95 aa21.5■■□□□ 1.03
HOMER3-205ENST00000542541 DNAJC14Q6Y2X3 702 aaPredicted RBP21.5■■□□□ 1.03
HOMER3-205ENST00000542541 CLEC1AQ8NC01 280 aa21.5■■□□□ 1.03
HOMER3-205ENST00000542541 NUP43Q8NFH3 380 aa21.5■■□□□ 1.03
HOMER3-205ENST00000542541 OR52R1Q8NGF1 315 aa21.5■■□□□ 1.03
HOMER3-205ENST00000542541 RCN3Q96D15 328 aa21.5■■□□□ 1.03
HOMER3-205ENST00000542541 NPAS2Q99743 824 aa21.5■■□□□ 1.03
HOMER3-205ENST00000542541 SLC35A5Q9BS91 424 aa21.5■■□□□ 1.03
HOMER3-205ENST00000542541 NUDT9Q9BW91 350 aa21.5■■□□□ 1.03
HOMER3-205ENST00000542541 TRIM4Q9C037 500 aa21.5■■□□□ 1.03
HOMER3-205ENST00000542541 PAIP1Q9H074 479 aaKnown RBP21.5■■□□□ 1.03
HOMER3-205ENST00000542541 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.5■■□□□ 1.03
HOMER3-205ENST00000542541 MAP10Q9P2G4 905 aa21.5■■□□□ 1.03
HOMER3-205ENST00000542541 URB1O60287 2271 aaKnown RBP21.5■■□□□ 1.03
HOMER3-205ENST00000542541 AIM2O14862 343 aa21.49■■□□□ 1.03
HOMER3-205ENST00000542541 PRKAG1P54619 331 aa21.49■■□□□ 1.03
HOMER3-205ENST00000542541 AIMP2Q13155 320 aaKnown RBP21.49■■□□□ 1.03
HOMER3-205ENST00000542541 ART3Q13508 389 aa21.49■■□□□ 1.03
HOMER3-205ENST00000542541 HSDL2Q6YN16 418 aa21.49■■□□□ 1.03
HOMER3-205ENST00000542541 DHDDSQ86SQ9 333 aa21.49■■□□□ 1.03
HOMER3-205ENST00000542541 KBTBD2Q8IY47 623 aa21.49■■□□□ 1.03
HOMER3-205ENST00000542541 ZNF615Q8N8J6 731 aa21.49■■□□□ 1.03
HOMER3-205ENST00000542541 KDF1Q8NAX2 398 aaPredicted RBP21.49■■□□□ 1.03
HOMER3-205ENST00000542541 ROPN1LQ96C74 230 aa21.49■■□□□ 1.03
HOMER3-205ENST00000542541 MS4A4EQ96PG1 132 aa21.49■■□□□ 1.03
HOMER3-205ENST00000542541 PCDHB14Q9Y5E9 798 aa21.49■■□□□ 1.03
HOMER3-205ENST00000542541 RNF103-CHMP3A0A140T963 221 aa21.48■■□□□ 1.03
HOMER3-205ENST00000542541 KRT75O95678 551 aa21.48■■□□□ 1.03
HOMER3-205ENST00000542541 SERPINA7P05543 415 aa21.48■■□□□ 1.03
HOMER3-205ENST00000542541 PTPN6P29350 595 aa21.48■■□□□ 1.03
HOMER3-205ENST00000542541 CHI3L1P36222 383 aaPredicted RBP21.48■■□□□ 1.03
HOMER3-205ENST00000542541 TMPRSS3P57727 454 aa21.48■■□□□ 1.03
HOMER3-205ENST00000542541 TP53BP2Q13625 1128 aa21.48■■□□□ 1.03
HOMER3-205ENST00000542541 TRMT5Q32P41 509 aaKnown RBP21.48■■□□□ 1.03
HOMER3-205ENST00000542541 DLEU7Q6UYE1 221 aa21.48■■□□□ 1.03
HOMER3-205ENST00000542541 SLC29A4Q7RTT9 530 aa21.48■■□□□ 1.03
HOMER3-205ENST00000542541 OR8K3Q8NH51 312 aa21.48■■□□□ 1.03
HOMER3-205ENST00000542541 OR5AK3PQ8NH89 298 aa21.48■■□□□ 1.03
HOMER3-205ENST00000542541 ELP5Q8TE02 316 aa21.48■■□□□ 1.03
HOMER3-205ENST00000542541 ANKRA2Q9H9E1 313 aa21.48■■□□□ 1.03
HOMER3-205ENST00000542541 SLAMF8Q9P0V8 285 aa21.48■■□□□ 1.03
HOMER3-205ENST00000542541 TAF4O00268 1085 aa21.47■■□□□ 1.03
HOMER3-205ENST00000542541 CALB2P22676 271 aa21.47■■□□□ 1.03
HOMER3-205ENST00000542541 C6orf120Q7Z4R8 191 aa21.47■■□□□ 1.03
HOMER3-205ENST00000542541 ZNF321PQ8N8H1 164 aa21.47■■□□□ 1.03
HOMER3-205ENST00000542541 OR5L2Q8NGL0 311 aa21.47■■□□□ 1.03
HOMER3-205ENST00000542541 DEFB126Q9BYW3 111 aa21.47■■□□□ 1.03
HOMER3-205ENST00000542541 IL1RL2Q9HB29 575 aa21.47■■□□□ 1.03
HOMER3-205ENST00000542541 TRBV11-1A0A0K0K1C0 115 aa21.47■■□□□ 1.03
HOMER3-205ENST00000542541 ZFAND5O76080 213 aa21.47■■□□□ 1.03
HOMER3-205ENST00000542541 PSMG1O95456 288 aa21.47■■□□□ 1.03
HOMER3-205ENST00000542541 CBX6O95503 412 aa21.47■■□□□ 1.03
HOMER3-205ENST00000542541 PPIBP23284 216 aaKnown RBP21.47■■□□□ 1.03
HOMER3-205ENST00000542541 EMDP50402 254 aa21.47■■□□□ 1.03
HOMER3-205ENST00000542541 GAB1Q13480 694 aa21.47■■□□□ 1.03
HOMER3-205ENST00000542541 MYBPC3Q14896 1274 aa21.47■■□□□ 1.03
HOMER3-205ENST00000542541 HLA-DQA1Q5Y7H0 255 aa21.47■■□□□ 1.03
HOMER3-205ENST00000542541 JMJD6Q6NYC1 403 aaPredicted RBP21.47■■□□□ 1.03
HOMER3-205ENST00000542541 ZCCHC12Q6PEW1 402 aa21.47■■□□□ 1.03
HOMER3-205ENST00000542541 C16orf52Q8NHV5 167 aa21.47■■□□□ 1.03
HOMER3-205ENST00000542541 LRRC58Q96CX6 371 aa21.47■■□□□ 1.03
HOMER3-205ENST00000542541 NEURL3Q96EH8 262 aa21.47■■□□□ 1.03
HOMER3-205ENST00000542541 CGREF1Q99674 301 aa21.47■■□□□ 1.03
HOMER3-205ENST00000542541 TPT1P8Q9HAU6 139 aa21.47■■□□□ 1.03
HOMER3-205ENST00000542541 SLC6A13Q9NSD5 602 aa21.47■■□□□ 1.03
HOMER3-205ENST00000542541 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.47■■□□□ 1.03
HOMER3-205ENST00000542541 FAF1Q9UNN5 650 aaPredicted RBP21.47■■□□□ 1.03
HOMER3-205ENST00000542541 HEMK1Q9Y5R4 338 aaPredicted RBP21.47■■□□□ 1.03
HOMER3-205ENST00000542541 ARGFXA6NJG6 315 aa21.46■■□□□ 1.03
HOMER3-205ENST00000542541 TTC36A6NLP5 189 aa21.46■■□□□ 1.03
HOMER3-205ENST00000542541 K7ENP7 123 aa21.46■■□□□ 1.03
HOMER3-205ENST00000542541 EBAG9O00559 213 aa21.46■■□□□ 1.03
HOMER3-205ENST00000542541 SOX30O94993 753 aa21.46■■□□□ 1.03
HOMER3-205ENST00000542541 CLPSP04118 112 aa21.46■■□□□ 1.03
HOMER3-205ENST00000542541 KRT16P08779 473 aa21.46■■□□□ 1.03
HOMER3-205ENST00000542541 PRIM2P49643 509 aa21.46■■□□□ 1.03
HOMER3-205ENST00000542541 NUDT2P50583 147 aa21.46■■□□□ 1.03
HOMER3-205ENST00000542541 RNF4P78317 190 aa21.46■■□□□ 1.03
HOMER3-205ENST00000542541 VAC14Q08AM6 782 aa21.46■■□□□ 1.03
HOMER3-205ENST00000542541 ZNHIT3Q15649 155 aaPredicted RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms