RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 PEX11GQ96HA9 241 aa26■■□□□ 1.75
CCM2-218ENST00000541586 EFHD1Q9BUP0 239 aa26■■□□□ 1.75
CCM2-218ENST00000541586 RBCK1Q9BYM8 510 aa26■■□□□ 1.75
CCM2-218ENST00000541586 SCN2AQ99250 2005 aa26■■□□□ 1.75
CCM2-218ENST00000541586 BMP2P12643 396 aa26■■□□□ 1.75
CCM2-218ENST00000541586 PORP16435 677 aaPredicted RBP26■■□□□ 1.75
CCM2-218ENST00000541586 CD82P27701 267 aa26■■□□□ 1.75
CCM2-218ENST00000541586 PCGF2P35227 344 aa26■■□□□ 1.75
CCM2-218ENST00000541586 PRIM2P49643 509 aa26■■□□□ 1.75
CCM2-218ENST00000541586 NKAIN1Q4KMZ8 207 aa26■■□□□ 1.75
CCM2-218ENST00000541586 TBCELQ5QJ74 424 aa26■■□□□ 1.75
CCM2-218ENST00000541586 MLIPQ5VWP3 458 aa26■■□□□ 1.75
CCM2-218ENST00000541586 ADCY4Q8NFM4 1077 aa26■■□□□ 1.75
CCM2-218ENST00000541586 ELP4Q96EB1 424 aa26■■□□□ 1.75
CCM2-218ENST00000541586 NAF1Q96HR8 494 aaKnown RBP26■■□□□ 1.75
CCM2-218ENST00000541586 LRFN5Q96NI6 719 aa26■■□□□ 1.75
CCM2-218ENST00000541586 PKP2Q99959 881 aa26■■□□□ 1.75
CCM2-218ENST00000541586 TMEM38AQ9H6F2 299 aa26■■□□□ 1.75
CCM2-218ENST00000541586 DCAF13Q9NV06 445 aaKnown RBP26■■□□□ 1.75
CCM2-218ENST00000541586 IFT80Q9P2H3 777 aaPredicted RBP26■■□□□ 1.75
CCM2-218ENST00000541586 RAD1O60671 282 aa25.99■■□□□ 1.75
CCM2-218ENST00000541586 SERPINA1P01009 418 aa25.99■■□□□ 1.75
CCM2-218ENST00000541586 IL10P22301 178 aa25.99■■□□□ 1.75
CCM2-218ENST00000541586 MC3RP41968 323 aa25.99■■□□□ 1.75
CCM2-218ENST00000541586 ZNF385CQ66K41 422 aaPredicted RBP25.99■■□□□ 1.75
CCM2-218ENST00000541586 ESX1Q8N693 406 aa25.99■■□□□ 1.75
CCM2-218ENST00000541586 HORMAD2Q8N7B1 307 aa25.99■■□□□ 1.75
CCM2-218ENST00000541586 FBXO30Q8TB52 745 aa25.99■■□□□ 1.75
CCM2-218ENST00000541586 ADAMTS18Q8TE60 1221 aa25.99■■□□□ 1.75
CCM2-218ENST00000541586 KAT2AQ92830 837 aa25.99■■□□□ 1.75
CCM2-218ENST00000541586 ANKRD9Q96BM1 317 aaPredicted RBP25.99■■□□□ 1.75
CCM2-218ENST00000541586 RIMS3Q9UJD0 308 aa25.99■■□□□ 1.75
CCM2-218ENST00000541586 NCOR2Q9Y618 2525 aa25.98■■□□□ 1.75
CCM2-218ENST00000541586 AHCTF1Q8WYP5 2266 aa25.98■■□□□ 1.75
CCM2-218ENST00000541586 FBLP22087 321 aaKnown RBP25.98■■□□□ 1.75
CCM2-218ENST00000541586 DSTNP60981 165 aa25.98■■□□□ 1.75
CCM2-218ENST00000541586 RBBP4Q09028 425 aa25.98■■□□□ 1.75
CCM2-218ENST00000541586 TGIF1Q15583 401 aa25.98■■□□□ 1.75
CCM2-218ENST00000541586 TNFAIP8L2Q6P589 184 aaPredicted RBP25.98■■□□□ 1.75
CCM2-218ENST00000541586 IL22RA1Q8N6P7 574 aa25.98■■□□□ 1.75
CCM2-218ENST00000541586 MOAP1Q96BY2 351 aa25.98■■□□□ 1.75
CCM2-218ENST00000541586 SEPHS2Q99611 448 aa25.98■■□□□ 1.75
CCM2-218ENST00000541586 MYOCOSA0A1B0GUC4 107 aa25.97■■□□□ 1.75
CCM2-218ENST00000541586 EMC8O43402 210 aa25.97■■□□□ 1.75
CCM2-218ENST00000541586 TIPRLO75663 272 aa25.97■■□□□ 1.75
CCM2-218ENST00000541586 FHP07954 510 aa25.97■■□□□ 1.75
CCM2-218ENST00000541586 KDELR2P33947 212 aa25.97■■□□□ 1.75
CCM2-218ENST00000541586 PRKAG1P54619 331 aa25.97■■□□□ 1.75
CCM2-218ENST00000541586 BHLHB9Q6PI77 547 aa25.97■■□□□ 1.75
CCM2-218ENST00000541586 ENPP6Q6UWR7 440 aa25.97■■□□□ 1.75
CCM2-218ENST00000541586 FAM86B1Q8N7N1 296 aa25.97■■□□□ 1.75
CCM2-218ENST00000541586 PAPD5Q8NDF8 572 aaKnown RBP25.97■■□□□ 1.75
CCM2-218ENST00000541586 OR56A1Q8NGH5 318 aa25.97■■□□□ 1.75
CCM2-218ENST00000541586 OR51Q1Q8NH59 317 aa25.97■■□□□ 1.75
CCM2-218ENST00000541586 LRTOMTQ8WZ04 291 aa25.97■■□□□ 1.75
CCM2-218ENST00000541586 SLC35G5Q96KT7 338 aa25.97■■□□□ 1.75
CCM2-218ENST00000541586 SERHL2Q9H4I8 314 aa25.97■■□□□ 1.75
CCM2-218ENST00000541586 TRPC4Q9UBN4 977 aa25.97■■□□□ 1.75
CCM2-218ENST00000541586 MRPS33Q9Y291 106 aaKnown RBP25.97■■□□□ 1.75
CCM2-218ENST00000541586 CACNA1AO00555 2505 aa25.97■■□□□ 1.75
CCM2-218ENST00000541586 TCN2P20062 427 aa25.97■■□□□ 1.75
CCM2-218ENST00000541586 PRR5P85299 388 aa25.97■■□□□ 1.75
CCM2-218ENST00000541586 EEF1A2Q05639 463 aaKnown RBP25.97■■□□□ 1.75
CCM2-218ENST00000541586 LRRC23Q53EV4 343 aaPredicted RBP25.97■■□□□ 1.75
CCM2-218ENST00000541586 GALNT10Q86SR1 603 aa25.97■■□□□ 1.75
CCM2-218ENST00000541586 FGF11Q92914 225 aa25.97■■□□□ 1.75
CCM2-218ENST00000541586 CCDC86Q9H6F5 360 aaKnown RBP25.97■■□□□ 1.75
CCM2-218ENST00000541586 ANKRA2Q9H9E1 313 aa25.97■■□□□ 1.75
CCM2-218ENST00000541586 C3orf14Q9HBI5 128 aa25.97■■□□□ 1.75
CCM2-218ENST00000541586 SLC22A11Q9NSA0 550 aa25.97■■□□□ 1.75
CCM2-218ENST00000541586 OLAHQ9NV23 265 aa25.97■■□□□ 1.75
CCM2-218ENST00000541586 BLACEA4D250 179 aa25.96■■□□□ 1.75
CCM2-218ENST00000541586 ATP1B1P05026 303 aa25.96■■□□□ 1.75
CCM2-218ENST00000541586 ARAFP10398 606 aa25.96■■□□□ 1.75
CCM2-218ENST00000541586 VHLP40337 213 aa25.96■■□□□ 1.75
CCM2-218ENST00000541586 MRPS35P82673 323 aaKnown RBP25.96■■□□□ 1.75
CCM2-218ENST00000541586 SCARB2Q14108 478 aa25.96■■□□□ 1.75
CCM2-218ENST00000541586 ERV3-1Q14264 604 aa25.96■■□□□ 1.75
CCM2-218ENST00000541586 ZNF630Q2M218 657 aaPredicted RBP25.96■■□□□ 1.75
CCM2-218ENST00000541586 ZNF595Q8IYB9 648 aa25.96■■□□□ 1.75
CCM2-218ENST00000541586 TMEM102Q8N9M5 508 aaPredicted RBP25.96■■□□□ 1.75
CCM2-218ENST00000541586 NFKBIDQ8NI38 313 aa25.96■■□□□ 1.75
CCM2-218ENST00000541586 NKD1Q969G9 470 aa25.96■■□□□ 1.75
CCM2-218ENST00000541586 TACO1Q9BSH4 297 aaKnown RBP25.96■■□□□ 1.75
CCM2-218ENST00000541586 GPN3Q9UHW5 284 aaPredicted RBP25.96■■□□□ 1.75
CCM2-218ENST00000541586 HNRNPRO43390 633 aaKnown RBP25.95■■□□□ 1.74
CCM2-218ENST00000541586 CDC123O75794 336 aaPredicted RBP25.95■■□□□ 1.74
CCM2-218ENST00000541586 PRKD3O94806 890 aa25.95■■□□□ 1.74
CCM2-218ENST00000541586 PPP2R1BP30154 601 aa25.95■■□□□ 1.74
CCM2-218ENST00000541586 CDK6Q00534 326 aa25.95■■□□□ 1.74
CCM2-218ENST00000541586 ZC3H7AQ8IWR0 971 aaKnown RBP25.95■■□□□ 1.74
CCM2-218ENST00000541586 EID3Q8N140 333 aa25.95■■□□□ 1.74
CCM2-218ENST00000541586 NUP43Q8NFH3 380 aa25.95■■□□□ 1.74
CCM2-218ENST00000541586 OR7G2Q8NG99 324 aa25.95■■□□□ 1.74
CCM2-218ENST00000541586 GATA6Q92908 595 aa25.95■■□□□ 1.74
CCM2-218ENST00000541586 RNF145Q96MT1 663 aa25.95■■□□□ 1.74
CCM2-218ENST00000541586 UGT2B28Q9BY64 529 aa25.95■■□□□ 1.74
CCM2-218ENST00000541586 UPK1AO00322 258 aa25.94■■□□□ 1.74
CCM2-218ENST00000541586 PLOD2O00469 737 aa25.94■■□□□ 1.74
CCM2-218ENST00000541586 HMGN4O00479 90 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms