RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 FFAR3O14843 346 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 NPC1O15118 1278 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 SCAMP2O15127 329 aaKnown RBP9.86□□□□□ -0.83
CHFR-219ENST00000541341 POLR1CO15160 346 aaPredicted RBP9.86□□□□□ -0.83
CHFR-219ENST00000541341 GPR42O15529 346 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 AP2A2O94973 939 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 SEMA3DO95025 777 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 PRAMEF1O95521 474 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 GUCA1CO95843 209 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 DHFRP00374 187 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 PRLP01236 227 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 TRBC1P01850 177 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 GSTM1P09488 218 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 TSPAN19P0C672 248 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 OSMP13725 252 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 C21orf33P30042 268 aaPredicted RBP9.86□□□□□ -0.83
CHFR-219ENST00000541341 FGF9P31371 208 aaPredicted RBP9.86□□□□□ -0.83
CHFR-219ENST00000541341 ACSL1P33121 698 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 RCVRNP35243 200 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 IFNGR2P38484 337 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 OR3A3P47888 321 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 ANXA11P50995 505 aaKnown RBP9.86□□□□□ -0.83
CHFR-219ENST00000541341 PLIN5Q00G26 463 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 HMGCS1Q01581 520 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 NFATC2Q13469 925 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 LARS2Q15031 903 aaKnown RBP9.86□□□□□ -0.83
CHFR-219ENST00000541341 CPSF6Q16630 551 aaKnown RBP eCLIP9.86□□□□□ -0.83
CHFR-219ENST00000541341 SMN1Q16637 294 aaKnown RBP9.86□□□□□ -0.83
CHFR-219ENST00000541341 FNDC3BQ53EP0 1204 aaKnown RBP9.86□□□□□ -0.83
CHFR-219ENST00000541341 PRAMEF14Q5SWL7 426 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 FRMPD2BQ6IN97 320 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 LUZP2Q86TE4 346 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 PDZD3Q86UT5 571 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 LAPTM4BQ86VI4 370 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 ATCAYQ86WG3 371 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 PTOV1Q86YD1 416 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 SNX29P2Q8IUI4 249 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 PIANPQ8IYJ0 282 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 ELMOD2Q8IZ81 293 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 KRTCAP2Q8N6L1 136 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 OR4C15Q8NGM1 316 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 ADAMTS14Q8WXS8 1223 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 FOXJ1Q92949 421 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 UBE2E3Q969T4 207 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 PYCR2Q96C36 320 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 MRGPRX3Q96LB0 322 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 TSSK3Q96PN8 268 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 KCNC2Q96PR1 638 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 VPS35Q96QK1 796 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 CCM2Q9BSQ5 444 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 CENPOQ9BU64 300 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 SPATA5L1Q9BVQ7 753 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 OR51E2Q9H255 320 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 TRIM45Q9H8W5 580 aaPredicted RBP9.86□□□□□ -0.83
CHFR-219ENST00000541341 EXOSC4Q9NPD3 245 aaKnown RBP9.86□□□□□ -0.83
CHFR-219ENST00000541341 PRDM8Q9NQV8 689 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 ZNF275Q9NSD4 429 aaPredicted RBP9.86□□□□□ -0.83
CHFR-219ENST00000541341 ELOVL2Q9NXB9 296 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 VNN3Q9NY84 501 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 ZDHHC3Q9NYG2 299 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 USP36Q9P275 1121 aaKnown RBP9.86□□□□□ -0.83
CHFR-219ENST00000541341 KCNN3Q9UGI6 736 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 ATP6V1HQ9UI12 483 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 TBC1D24Q9ULP9 559 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 EXOSC1Q9Y3B2 195 aaKnown RBP9.86□□□□□ -0.83
CHFR-219ENST00000541341 GPSM3Q9Y4H4 160 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 SNX11Q9Y5W9 270 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 RNF215Q9Y6U7 377 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 ENPP4Q9Y6X5 453 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 PIPSLA2A3N6 862 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 AGAP14A8MT82 685 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 METTL12A8MUP2 240 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 SGK494L7N484 410 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 TLR4O00206 839 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 CBX4O00257 560 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 TFECO14948 347 aaPredicted RBP9.85□□□□□ -0.83
CHFR-219ENST00000541341 SMAD6O43541 496 aaKnown RBP9.85□□□□□ -0.83
CHFR-219ENST00000541341 NDUFB5O43674 189 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 FZD6O60353 706 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 OR1I1O60431 355 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 TMEM127O75204 238 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 RAB36O95755 333 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 SPNP16150 400 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 SLC19A1P41440 591 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 MAP2K3P46734 347 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 SLC6A12P48065 614 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 RHOAP61586 193 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 TAGLNQ01995 201 aaKnown RBP9.85□□□□□ -0.83
CHFR-219ENST00000541341 IRF8Q02556 426 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 GNA13Q14344 377 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 GPR19Q15760 415 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 GLYR1Q49A26 553 aaPredicted RBP9.85□□□□□ -0.83
CHFR-219ENST00000541341 SGO1Q5FBB7 561 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 HIST2H2AA3Q6FI13 130 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 UBE2R2Q712K3 238 aaPredicted RBP9.85□□□□□ -0.83
CHFR-219ENST00000541341 NXPE1Q8N323 547 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 SLC5A8Q8N695 610 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 LRRC17Q8N6Y2 441 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 CELF2-AS1Q8N7Q2 184 aa9.85□□□□□ -0.83
CHFR-219ENST00000541341 NANOGP1Q8N7R0 232 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms