RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 ILKQ13418 452 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 SF3B4Q15427 424 aaKnown RBP eCLIP13.26□□□□□ -0.293e-11■■■■■ 37.6
UBE3B-210ENST00000539599 ZNF181Q2M3W8 571 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 ZNF362Q5T0B9 420 aaPredicted RBP13.26□□□□□ -0.29
UBE3B-210ENST00000539599 FAM46CQ5VWP2 391 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 TANGO2Q6ICL3 276 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 NRARPQ7Z6K4 114 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 OR2A1Q8NGT9 310 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 CREB3L4Q8TEY5 395 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 GATAD2BQ8WXI9 593 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 ASB15Q8WXK1 588 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 KLHL6Q8WZ60 621 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 RGMAQ96B86 450 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 ZBED6CLQ96FA7 236 aaPredicted RBP13.26□□□□□ -0.29
UBE3B-210ENST00000539599 CRELD1Q96HD1 420 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 TMEM80Q96HE8 168 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 ZNF514Q96K75 400 aaPredicted RBP13.26□□□□□ -0.29
UBE3B-210ENST00000539599 DCLRE1CQ96SD1 692 aaKnown RBP13.26□□□□□ -0.29
UBE3B-210ENST00000539599 FNDC11Q9BVV2 318 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 SMURF1Q9HCE7 757 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 CA5BQ9Y2D0 317 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 LRIT2A6NDA9 550 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 TAF4O00268 1085 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 TFECO14948 347 aaPredicted RBP13.26□□□□□ -0.29
UBE3B-210ENST00000539599 HYAL3O43820 417 aaPredicted RBP13.26□□□□□ -0.29
UBE3B-210ENST00000539599 CDRT1O95170 752 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 MED26O95402 600 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 DAB2P98082 770 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 SYT14P1Q58G82 188 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 C1orf53Q5VUE5 145 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 C12orf73Q69YU5 71 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 CCDC190Q86UF4 302 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 TBC1D19Q8N5T2 526 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 NLGN4YQ8NFZ3 816 aaPredicted RBP13.26□□□□□ -0.29
UBE3B-210ENST00000539599 OR52I1Q8NGK6 324 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 OR8D4Q8NGM9 314 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 OR9A2Q8NGT5 310 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 SUN3Q8TAQ9 357 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 WFIKKN2Q8TEU8 576 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 ZFPM2Q8WW38 1151 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 SLC9A6Q92581 669 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 PPP1R16AQ96I34 528 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 BBS4Q96RK4 519 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 RACGAP1Q9H0H5 632 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 NEUROD4Q9HD90 331 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 SLC6A20Q9NP91 592 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 TMEM74BQ9NUR3 256 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 KLK4Q9Y5K2 254 aa13.26□□□□□ -0.29
UBE3B-210ENST00000539599 A0A0A6YYD5 115 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 PDZK1P1A8MUH7 402 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 DVL2O14641 736 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 SCG5P05408 212 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 CSTF2P33240 577 aaKnown RBP eCLIP13.25□□□□□ -0.29
UBE3B-210ENST00000539599 MC3RP41968 323 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 AVPR1BP47901 424 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 PRKCDQ05655 676 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 HYAL2Q12891 473 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 TMEM52BQ4KMG9 183 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 AGBL4Q5VU57 503 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 PSRC1Q6PGN9 363 aaPredicted RBP13.25□□□□□ -0.29
UBE3B-210ENST00000539599 C19orf48Q6RUI8 117 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 LINC00299Q6ZSB3 139 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 USP30Q70CQ3 517 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 OR4N5Q8IXE1 308 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 HCAR2Q8TDS4 363 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 TM9SF4Q92544 642 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 WASH6PQ9NQA3 447 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 SLC35C2Q9NQQ7 365 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 P2RX2Q9UBL9 471 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 ZFR2Q9UPR6 939 aaKnown RBP13.25□□□□□ -0.29
UBE3B-210ENST00000539599 FAAHO00519 579 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 FCMRO60667 390 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 EML2O95834 649 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 ERGP11308 486 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 SOX6P35712 828 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 OLR1P78380 273 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 ALDH6A1Q02252 535 aaKnown RBP13.25□□□□□ -0.29
UBE3B-210ENST00000539599 CHRNEQ04844 493 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 ELOAQ14241 798 aaKnown RBP13.25□□□□□ -0.29
UBE3B-210ENST00000539599 SNAPC1Q16533 368 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 ZNF765Q7L2R6 523 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 PRICKLE2Q7Z3G6 844 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 AKAP14Q86UN6 197 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 COL26A1Q96A83 441 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 FAM46AQ96IP4 442 aaKnown RBP13.25□□□□□ -0.29
UBE3B-210ENST00000539599 ASB16Q96NS5 453 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 TRNT1Q96Q11 434 aaKnown RBP13.25□□□□□ -0.29
UBE3B-210ENST00000539599 FUZQ9BT04 418 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 CNOT2Q9NZN8 540 aaKnown RBP13.25□□□□□ -0.29
UBE3B-210ENST00000539599 MALT1Q9UDY8 824 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 GPSM3Q9Y4H4 160 aa13.25□□□□□ -0.29
UBE3B-210ENST00000539599 GPC6Q9Y625 555 aaPredicted RBP13.25□□□□□ -0.29
UBE3B-210ENST00000539599 SPIN1Q9Y657 262 aaPredicted RBP13.25□□□□□ -0.29
UBE3B-210ENST00000539599 SH3D21A4FU49 640 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 SYNDIG1LA6NDD5 238 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 ZIC2O95409 532 aaPredicted RBP13.24□□□□□ -0.29
UBE3B-210ENST00000539599 AIFM1O95831 613 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 FUT1P19526 365 aa13.24□□□□□ -0.29
UBE3B-210ENST00000539599 PEBP1P30086 187 aaKnown RBP13.24□□□□□ -0.29
UBE3B-210ENST00000539599 TRHRP34981 398 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms