RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 TRA2BP62995 288 aaKnown RBP17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 RAE1P78406 368 aaKnown RBP17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 BTKQ06187 659 aa17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 LTB4RQ15722 352 aa17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 ACAD11Q709F0 780 aa17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 LRRC25Q8N386 305 aaPredicted RBP17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 OR10Q1Q8NGQ4 319 aa17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 SPPL2AQ8TCT8 520 aa17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 UBLCP1Q8WVY7 318 aaPredicted RBP17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 SARAFQ96BY9 339 aa17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 CNRIP1Q96F85 164 aaPredicted RBP17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 APIPQ96GX9 242 aa17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 ZNF597Q96LX8 424 aa17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 NXF5Q9H1B4 397 aaKnown RBP17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 GSTO2Q9H4Y5 243 aa17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 PFDN4Q9NQP4 134 aa17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 RYDENQ9NUL5 291 aaKnown RBP17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 DCDC2Q9UHG0 476 aa17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 MCM8Q9UJA3 840 aa17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 UTS2RQ9UKP6 389 aa17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 FAM215AQ9Y5M1 114 aa17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 ZNF780BQ9Y6R6 833 aa17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 FBN2P35556 2912 aa17.5■□□□□ 0.39
TNFRSF1A-212ENST00000539372 GNG14A0A1W2PPG7 69 aa17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 ENO4A6NNW6 628 aa17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 TRIM3O75382 744 aaPredicted RBP17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 ENO1P06733 434 aaKnown RBP17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 IL3P08700 152 aa17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 MYL2P10916 166 aa17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 PCSK2P16519 638 aa17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 GDF1P27539 372 aa17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 ABCD3P28288 659 aa17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 SOX18P35713 384 aa17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 PKNOX1P55347 436 aa17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 MAP4K2Q12851 820 aa17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 TRMT12Q53H54 448 aaKnown RBP17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 WLSQ5T9L3 541 aa17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 TMEM198Q66K66 360 aa17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 RTL6Q6ICC9 239 aa17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 MEX3BQ6ZN04 569 aaKnown RBP17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 GBP7Q8N8V2 638 aaPredicted RBP17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 OR52R1Q8NGF1 315 aa17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 LILRB4Q8NHJ6 448 aa17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 ZNF681Q96N22 645 aa17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 RILPQ96NA2 401 aa17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 TTYH2Q9BSA4 534 aa17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 EBPLQ9BY08 206 aa17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 ITPAQ9BY32 194 aa17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 MID1IP1Q9NPA3 183 aa17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 B4GALT7Q9UBV7 327 aa17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 DLGAP4Q9Y2H0 992 aa17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 STK38LQ9Y2H1 464 aa17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 PLLPQ9Y342 182 aa17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 NCKAP5O14513 1909 aa17.49■□□□□ 0.39
TNFRSF1A-212ENST00000539372 ANKRD33BA6NCL7 494 aa17.48■□□□□ 0.39
TNFRSF1A-212ENST00000539372 G3V2L1 256 aa17.48■□□□□ 0.39
TNFRSF1A-212ENST00000539372 UBFD1O14562 309 aaKnown RBP17.48■□□□□ 0.39
TNFRSF1A-212ENST00000539372 GLRA3O75311 464 aa17.48■□□□□ 0.39
TNFRSF1A-212ENST00000539372 CBX7O95931 251 aa17.48■□□□□ 0.39
TNFRSF1A-212ENST00000539372 GLI4P10075 376 aa17.48■□□□□ 0.39
TNFRSF1A-212ENST00000539372 KRT15P19012 456 aa17.48■□□□□ 0.39
TNFRSF1A-212ENST00000539372 TMED10P49755 219 aaKnown RBP17.48■□□□□ 0.39
TNFRSF1A-212ENST00000539372 FOXA1P55317 472 aa17.48■□□□□ 0.39
TNFRSF1A-212ENST00000539372 MRPS35P82673 323 aaKnown RBP17.48■□□□□ 0.39
TNFRSF1A-212ENST00000539372 ACSM2AQ08AH3 577 aa17.48■□□□□ 0.39
TNFRSF1A-212ENST00000539372 TBCELQ5QJ74 424 aa17.48■□□□□ 0.39
TNFRSF1A-212ENST00000539372 ACSM2BQ68CK6 577 aa17.48■□□□□ 0.39
TNFRSF1A-212ENST00000539372 DESI1Q6ICB0 168 aa17.48■□□□□ 0.39
TNFRSF1A-212ENST00000539372 ZYG11AQ6WRX3 759 aa17.48■□□□□ 0.39
TNFRSF1A-212ENST00000539372 B3GNT6Q6ZMB0 384 aa17.48■□□□□ 0.39
TNFRSF1A-212ENST00000539372 CCDC116Q8IYX3 515 aa17.48■□□□□ 0.39
TNFRSF1A-212ENST00000539372 LIX1Q8N485 282 aa17.48■□□□□ 0.39
TNFRSF1A-212ENST00000539372 C17orf47Q8NEP4 570 aa17.48■□□□□ 0.39
TNFRSF1A-212ENST00000539372 EXOSC8Q96B26 276 aaKnown RBP17.48■□□□□ 0.39
TNFRSF1A-212ENST00000539372 SPOCK3Q9BQ16 436 aa17.48■□□□□ 0.39
TNFRSF1A-212ENST00000539372 ENKD1Q9H0I2 346 aa17.48■□□□□ 0.39
TNFRSF1A-212ENST00000539372 ZNF639Q9UID6 485 aa17.48■□□□□ 0.39
TNFRSF1A-212ENST00000539372 CFL2Q9Y281 166 aa17.48■□□□□ 0.39
TNFRSF1A-212ENST00000539372 APCP25054 2843 aa17.48■□□□□ 0.39
TNFRSF1A-212ENST00000539372 NINQ8N4C6 2090 aa17.48■□□□□ 0.39
TNFRSF1A-212ENST00000539372 TRAPPC6AO75865 159 aa17.47■□□□□ 0.39
TNFRSF1A-212ENST00000539372 PROCP04070 461 aa17.47■□□□□ 0.39
TNFRSF1A-212ENST00000539372 ABCB1P08183 1280 aaPredicted RBP17.47■□□□□ 0.39
TNFRSF1A-212ENST00000539372 TIA1P31483 386 aaKnown RBP eCLIP17.47■□□□□ 0.39
TNFRSF1A-212ENST00000539372 CASP3P42574 277 aa17.47■□□□□ 0.39
TNFRSF1A-212ENST00000539372 MASP1P48740 699 aa17.47■□□□□ 0.39
TNFRSF1A-212ENST00000539372 SPIN4Q56A73 249 aa17.47■□□□□ 0.39
TNFRSF1A-212ENST00000539372 C1orf185Q5T7R7 199 aa17.47■□□□□ 0.39
TNFRSF1A-212ENST00000539372 SH2D5Q6ZV89 423 aa17.47■□□□□ 0.39
TNFRSF1A-212ENST00000539372 PACS2Q86VP3 889 aa17.47■□□□□ 0.39
TNFRSF1A-212ENST00000539372 NEIL3Q8TAT5 605 aa17.47■□□□□ 0.39
TNFRSF1A-212ENST00000539372 C16orf78Q8WTQ4 265 aa17.47■□□□□ 0.39
TNFRSF1A-212ENST00000539372 CTHRC1Q96CG8 243 aa17.47■□□□□ 0.39
TNFRSF1A-212ENST00000539372 LURAP1Q96LR2 239 aa17.47■□□□□ 0.39
TNFRSF1A-212ENST00000539372 GNRHR2Q96P88 292 aa17.47■□□□□ 0.39
TNFRSF1A-212ENST00000539372 ANGPTL4Q9BY76 406 aa17.47■□□□□ 0.39
TNFRSF1A-212ENST00000539372 C12orf65Q9H3J6 166 aaKnown RBP17.47■□□□□ 0.39
TNFRSF1A-212ENST00000539372 ANKRA2Q9H9E1 313 aa17.47■□□□□ 0.39
TNFRSF1A-212ENST00000539372 ACKR4Q9NPB9 350 aa17.47■□□□□ 0.39
TNFRSF1A-212ENST00000539372 KCNJ16Q9NPI9 418 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms