RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 PACS2Q86VP3 889 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 RELL1Q8IUW5 271 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 PM20D2Q8IYS1 436 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 VWA5B2Q8N398 1253 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 METTL4Q8N3J2 472 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 OR4F6Q8NGB9 312 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 SLC44A1Q8WWI5 657 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 HSPBAP1Q96EW2 488 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 TMEM41AQ96HV5 264 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 GNRHR2Q96P88 292 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 FOXC2Q99958 501 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 LRRC1Q9BTT6 524 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 ITPAQ9BY32 194 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 POLDIP3Q9BY77 421 aaKnown RBP11.44□□□□□ -0.58
VAMP1-206ENST00000538970 NXF5Q9H1B4 397 aaKnown RBP11.44□□□□□ -0.58
VAMP1-206ENST00000538970 CXXC4Q9H2H0 198 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 RASSF1Q9NS23 344 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 AHSPQ9NZD4 102 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 SLC6A5Q9Y345 797 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 PCDHA9Q9Y5H5 950 aa11.44□□□□□ -0.58
VAMP1-206ENST00000538970 HRNRQ86YZ3 2850 aaPredicted RBP11.43□□□□□ -0.58
VAMP1-206ENST00000538970 C1orf226A1L170 272 aa11.43□□□□□ -0.58
VAMP1-206ENST00000538970 SMIM24O75264 130 aa11.43□□□□□ -0.58
VAMP1-206ENST00000538970 PPM1BO75688 479 aa11.43□□□□□ -0.58
VAMP1-206ENST00000538970 ACSL3O95573 720 aa11.43□□□□□ -0.58
VAMP1-206ENST00000538970 ATP1B1P05026 303 aa11.43□□□□□ -0.58
VAMP1-206ENST00000538970 ABCB1P08183 1280 aaPredicted RBP11.43□□□□□ -0.58
VAMP1-206ENST00000538970 BMP7P18075 431 aa11.43□□□□□ -0.58
VAMP1-206ENST00000538970 PTPN6P29350 595 aa11.43□□□□□ -0.58
VAMP1-206ENST00000538970 ZNF136P52737 540 aa11.43□□□□□ -0.58
VAMP1-206ENST00000538970 MAPK12P53778 367 aa11.43□□□□□ -0.58
VAMP1-206ENST00000538970 CKAP4Q07065 602 aaKnown RBP11.43□□□□□ -0.58
VAMP1-206ENST00000538970 MGAT2Q10469 447 aa11.43□□□□□ -0.58
VAMP1-206ENST00000538970 GALNT1Q10472 559 aaPredicted RBP11.43□□□□□ -0.58
VAMP1-206ENST00000538970 NNATQ16517 81 aa11.43□□□□□ -0.58
VAMP1-206ENST00000538970 TSNAXIP1Q2TAA8 658 aa11.43□□□□□ -0.58
VAMP1-206ENST00000538970 PRICKLE4Q2TBC4 344 aa11.43□□□□□ -0.58
VAMP1-206ENST00000538970 FLYWCH1Q4VC44 716 aa11.43□□□□□ -0.58
VAMP1-206ENST00000538970 EIPR1Q53HC9 387 aa11.43□□□□□ -0.58
VAMP1-206ENST00000538970 DCST1Q5T197 706 aa11.43□□□□□ -0.58
VAMP1-206ENST00000538970 NSUN5P2Q63ZY6 315 aa11.43□□□□□ -0.58
VAMP1-206ENST00000538970 TRPC4APQ8TEL6 797 aa11.43□□□□□ -0.58
VAMP1-206ENST00000538970 ZNF483Q8TF39 744 aaPredicted RBP11.43□□□□□ -0.58
VAMP1-206ENST00000538970 RNASE6Q93091 150 aaKnown RBP11.43□□□□□ -0.58
VAMP1-206ENST00000538970 HGDQ93099 445 aa11.43□□□□□ -0.58
VAMP1-206ENST00000538970 PAFAH2Q99487 392 aa11.43□□□□□ -0.58
VAMP1-206ENST00000538970 UGT2B28Q9BY64 529 aa11.43□□□□□ -0.58
VAMP1-206ENST00000538970 CLEC4MQ9H2X3 399 aaPredicted RBP11.43□□□□□ -0.58
VAMP1-206ENST00000538970 CDC42EP4Q9H3Q1 356 aaKnown RBP11.43□□□□□ -0.58
VAMP1-206ENST00000538970 LIME1Q9H400 295 aa11.43□□□□□ -0.58
VAMP1-206ENST00000538970 ELOVL6Q9H5J4 265 aa11.43□□□□□ -0.58
VAMP1-206ENST00000538970 FARSBQ9NSD9 589 aaKnown RBP11.43□□□□□ -0.58
VAMP1-206ENST00000538970 MAT2BQ9NZL9 334 aa11.43□□□□□ -0.58
VAMP1-206ENST00000538970 ZNF629Q9UEG4 869 aaPredicted RBP11.43□□□□□ -0.58
VAMP1-206ENST00000538970 MTRF1LQ9UGC7 380 aaKnown RBP11.43□□□□□ -0.58
VAMP1-206ENST00000538970 ST6GALNAC2Q9UJ37 374 aa11.43□□□□□ -0.58
VAMP1-206ENST00000538970 CES1P1Q9UKY3 287 aa11.43□□□□□ -0.58
VAMP1-206ENST00000538970 SLC12A4Q9UP95 1085 aa11.43□□□□□ -0.58
VAMP1-206ENST00000538970 CAMK2AQ9UQM7 478 aa11.43□□□□□ -0.58
VAMP1-206ENST00000538970 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.43□□□□□ -0.58
VAMP1-206ENST00000538970 MBD3L4A6NDZ8 208 aaPredicted RBP11.42□□□□□ -0.58
VAMP1-206ENST00000538970 MBD3L3A6NE82 208 aaPredicted RBP11.42□□□□□ -0.58
VAMP1-206ENST00000538970 GOLGA6L10A6NI86 522 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 MBD3L5A6NJ08 208 aaPredicted RBP11.42□□□□□ -0.58
VAMP1-206ENST00000538970 CD8B2A6NJW9 211 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 A6NNC1 897 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 GNB5O14775 395 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 CDH16O75309 829 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 GUCY1B2O75343 617 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 IL2RAP01589 272 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 INHBAP08476 426 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 COL6A2P12110 1019 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 NAGAP17050 411 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 KRT15P19012 456 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 SOX18P35713 384 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 MAP4K2Q12851 820 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 EXOSC7Q15024 291 aaKnown RBP11.42□□□□□ -0.58
VAMP1-206ENST00000538970 SF3B4Q15427 424 aaKnown RBP eCLIP11.42□□□□□ -0.58
VAMP1-206ENST00000538970 SGO1Q5FBB7 561 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 WIPI1Q5MNZ9 446 aaPredicted RBP11.42□□□□□ -0.58
VAMP1-206ENST00000538970 FAM219BQ5XKK7 198 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 TIGD3Q6B0B8 471 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 DESI1Q6ICB0 168 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 LETMD1Q6P1Q0 360 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 TMEM81Q6P7N7 255 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 FAM111BQ6SJ93 734 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 RPS27LQ71UM5 84 aaKnown RBP11.42□□□□□ -0.58
VAMP1-206ENST00000538970 TAOK1Q7L7X3 1001 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 MILR1Q7Z6M3 343 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 SIMC1Q8NDZ2 872 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 MBD3L2Q8NHZ7 208 aaPredicted RBP11.42□□□□□ -0.58
VAMP1-206ENST00000538970 FAM222BQ8WU58 562 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 LRRC46Q96FV0 321 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 RMND5BQ96G75 393 aaPredicted RBP11.42□□□□□ -0.58
VAMP1-206ENST00000538970 WDYHV1Q96HA8 205 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 BRINP2Q9C0B6 783 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 METTL7AQ9H8H3 244 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 CCM2LQ9NUG4 571 aaPredicted RBP11.42□□□□□ -0.58
VAMP1-206ENST00000538970 ZNF639Q9UID6 485 aa11.42□□□□□ -0.58
VAMP1-206ENST00000538970 FOXD3Q9UJU5 478 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms