RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 SFXN5Q8TD22 340 aa21.88■■□□□ 1.09
TMEM260-202ENST00000538838 ART5Q96L15 291 aa21.88■■□□□ 1.09
TMEM260-202ENST00000538838 IMMP1LQ96LU5 166 aa21.88■■□□□ 1.09
TMEM260-202ENST00000538838 EFCAB1Q9HAE3 211 aa21.88■■□□□ 1.09
TMEM260-202ENST00000538838 C3orf14Q9HBI5 128 aa21.88■■□□□ 1.09
TMEM260-202ENST00000538838 BCAP29Q9UHQ4 241 aa21.88■■□□□ 1.09
TMEM260-202ENST00000538838 C19orf53Q9UNZ5 99 aaPredicted RBP21.88■■□□□ 1.09
TMEM260-202ENST00000538838 RAXQ9Y2V3 346 aa21.88■■□□□ 1.09
TMEM260-202ENST00000538838 CHD8Q9HCK8 2581 aa21.87■■□□□ 1.09
TMEM260-202ENST00000538838 ZNF891A8MT65 544 aaPredicted RBP21.87■■□□□ 1.09
TMEM260-202ENST00000538838 HPP00738 406 aa21.87■■□□□ 1.09
TMEM260-202ENST00000538838 CELA2AP08217 269 aa21.87■■□□□ 1.09
TMEM260-202ENST00000538838 IFI6P09912 130 aa21.87■■□□□ 1.09
TMEM260-202ENST00000538838 ZCCHC18P0CG32 403 aa21.87■■□□□ 1.09
TMEM260-202ENST00000538838 CALB2P22676 271 aa21.87■■□□□ 1.09
TMEM260-202ENST00000538838 GPR143P51810 404 aa21.87■■□□□ 1.09
TMEM260-202ENST00000538838 PRKAG1P54619 331 aa21.87■■□□□ 1.09
TMEM260-202ENST00000538838 PRR5P85299 388 aa21.87■■□□□ 1.09
TMEM260-202ENST00000538838 BTBD16Q32M84 506 aa21.87■■□□□ 1.09
TMEM260-202ENST00000538838 APCDD1LQ8NCL9 501 aa21.87■■□□□ 1.09
TMEM260-202ENST00000538838 NUP43Q8NFH3 380 aa21.87■■□□□ 1.09
TMEM260-202ENST00000538838 FBXO27Q8NI29 283 aa21.87■■□□□ 1.09
TMEM260-202ENST00000538838 VPS50Q96JG6 964 aa21.87■■□□□ 1.09
TMEM260-202ENST00000538838 IP6K3Q96PC2 410 aa21.87■■□□□ 1.09
TMEM260-202ENST00000538838 PHF12Q96QT6 1004 aa21.87■■□□□ 1.09
TMEM260-202ENST00000538838 EQTNQ9NQ60 294 aa21.87■■□□□ 1.09
TMEM260-202ENST00000538838 COPS7AQ9UBW8 275 aa21.87■■□□□ 1.09
TMEM260-202ENST00000538838 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.87■■□□□ 1.09
TMEM260-202ENST00000538838 PPIEQ9UNP9 301 aaKnown RBP21.87■■□□□ 1.09
TMEM260-202ENST00000538838 PSMG1O95456 288 aa21.86■■□□□ 1.09
TMEM260-202ENST00000538838 SLC37A1P57057 533 aa21.86■■□□□ 1.09
TMEM260-202ENST00000538838 CDC20Q12834 499 aa21.86■■□□□ 1.09
TMEM260-202ENST00000538838 RNF111Q6ZNA4 994 aa21.86■■□□□ 1.09
TMEM260-202ENST00000538838 KIF2BQ8N4N8 673 aa21.86■■□□□ 1.09
TMEM260-202ENST00000538838 ZNF615Q8N8J6 731 aa21.86■■□□□ 1.09
TMEM260-202ENST00000538838 OR56A1Q8NGH5 318 aa21.86■■□□□ 1.09
TMEM260-202ENST00000538838 DNAJB8Q8NHS0 232 aa21.86■■□□□ 1.09
TMEM260-202ENST00000538838 ZFP90Q8TF47 636 aa21.86■■□□□ 1.09
TMEM260-202ENST00000538838 LRRC58Q96CX6 371 aa21.86■■□□□ 1.09
TMEM260-202ENST00000538838 CGREF1Q99674 301 aa21.86■■□□□ 1.09
TMEM260-202ENST00000538838 TRIM8Q9BZR9 551 aa21.86■■□□□ 1.09
TMEM260-202ENST00000538838 OR10A5Q9H207 317 aa21.86■■□□□ 1.09
TMEM260-202ENST00000538838 NTMQ9P121 344 aa21.86■■□□□ 1.09
TMEM260-202ENST00000538838 ZNF223Q9UK11 482 aaPredicted RBP21.86■■□□□ 1.09
TMEM260-202ENST00000538838 SSUH2Q9Y2M2 353 aa21.86■■□□□ 1.09
TMEM260-202ENST00000538838 GIMAP1-GIMAP5A0A087WTJ2 511 aa21.85■■□□□ 1.09
TMEM260-202ENST00000538838 EBAG9O00559 213 aa21.85■■□□□ 1.09
TMEM260-202ENST00000538838 RRP8O43159 456 aaKnown RBP21.85■■□□□ 1.09
TMEM260-202ENST00000538838 CHI3L1P36222 383 aaPredicted RBP21.85■■□□□ 1.09
TMEM260-202ENST00000538838 EXT1Q16394 746 aa21.85■■□□□ 1.09
TMEM260-202ENST00000538838 OR7G1Q8NGA0 311 aa21.85■■□□□ 1.09
TMEM260-202ENST00000538838 PNPT1Q8TCS8 783 aaKnown RBP21.85■■□□□ 1.09
TMEM260-202ENST00000538838 MOAP1Q96BY2 351 aa21.85■■□□□ 1.09
TMEM260-202ENST00000538838 ROPN1LQ96C74 230 aa21.85■■□□□ 1.09
TMEM260-202ENST00000538838 GIMAP5Q96F15 307 aa21.85■■□□□ 1.09
TMEM260-202ENST00000538838 VMP1Q96GC9 406 aa21.85■■□□□ 1.09
TMEM260-202ENST00000538838 MS4A4EQ96PG1 132 aa21.85■■□□□ 1.09
TMEM260-202ENST00000538838 EPS8L2Q9H6S3 715 aa21.85■■□□□ 1.09
TMEM260-202ENST00000538838 GID8Q9NWU2 228 aa21.85■■□□□ 1.09
TMEM260-202ENST00000538838 PRAMEF2O60811 474 aa21.84■■□□□ 1.09
TMEM260-202ENST00000538838 COQ9O75208 318 aa21.84■■□□□ 1.09
TMEM260-202ENST00000538838 MXRA7P84157 204 aa21.84■■□□□ 1.09
TMEM260-202ENST00000538838 ART3Q13508 389 aa21.84■■□□□ 1.09
TMEM260-202ENST00000538838 SAXO2Q658L1 398 aa21.84■■□□□ 1.09
TMEM260-202ENST00000538838 PLAG1Q6DJT9 500 aa21.84■■□□□ 1.09
TMEM260-202ENST00000538838 ANGPTL8Q6UXH0 198 aa21.84■■□□□ 1.09
TMEM260-202ENST00000538838 C16orf52Q8NHV5 167 aa21.84■■□□□ 1.09
TMEM260-202ENST00000538838 ZCCHC14Q8WYQ9 949 aaKnown RBP21.84■■□□□ 1.09
TMEM260-202ENST00000538838 NEURL3Q96EH8 262 aa21.84■■□□□ 1.09
TMEM260-202ENST00000538838 SEMA4CQ9C0C4 833 aa21.84■■□□□ 1.09
TMEM260-202ENST00000538838 TPT1P8Q9HAU6 139 aa21.84■■□□□ 1.09
TMEM260-202ENST00000538838 DTX4Q9Y2E6 619 aa21.84■■□□□ 1.09
TMEM260-202ENST00000538838 TRBV11-1A0A0K0K1C0 115 aa21.84■■□□□ 1.09
TMEM260-202ENST00000538838 EMDP50402 254 aa21.84■■□□□ 1.09
TMEM260-202ENST00000538838 CASP9P55211 416 aa21.84■■□□□ 1.09
TMEM260-202ENST00000538838 RPS26P62854 115 aaKnown RBP21.84■■□□□ 1.09
TMEM260-202ENST00000538838 Q0VFX4 171 aa21.84■■□□□ 1.09
TMEM260-202ENST00000538838 ZNF155Q12901 538 aaPredicted RBP21.84■■□□□ 1.09
TMEM260-202ENST00000538838 LASP1Q14847 261 aaKnown RBP21.84■■□□□ 1.09
TMEM260-202ENST00000538838 C6orf120Q7Z4R8 191 aa21.84■■□□□ 1.09
TMEM260-202ENST00000538838 WDR53Q7Z5U6 358 aaPredicted RBP21.84■■□□□ 1.09
TMEM260-202ENST00000538838 C9orf40Q8IXQ3 194 aa21.84■■□□□ 1.09
TMEM260-202ENST00000538838 FBXO30Q8TB52 745 aa21.84■■□□□ 1.09
TMEM260-202ENST00000538838 SLC35G5Q96KT7 338 aa21.84■■□□□ 1.09
TMEM260-202ENST00000538838 ANKRD27Q96NW4 1050 aa21.84■■□□□ 1.09
TMEM260-202ENST00000538838 CPPED1Q9BRF8 314 aaPredicted RBP21.84■■□□□ 1.09
TMEM260-202ENST00000538838 IKZF5Q9H5V7 419 aa21.84■■□□□ 1.09
TMEM260-202ENST00000538838 GPATCH2Q9NW75 528 aa21.84■■□□□ 1.09
TMEM260-202ENST00000538838 HEMK1Q9Y5R4 338 aaPredicted RBP21.84■■□□□ 1.09
TMEM260-202ENST00000538838 CFAP47Q6ZTR5 3102 aa21.84■■□□□ 1.09
TMEM260-202ENST00000538838 BCAS2O75934 225 aaPredicted RBP21.83■■□□□ 1.08
TMEM260-202ENST00000538838 NPPAP01160 153 aa21.83■■□□□ 1.08
TMEM260-202ENST00000538838 HMGN2P05204 90 aaKnown RBP21.83■■□□□ 1.08
TMEM260-202ENST00000538838 MNAT1P51948 309 aa21.83■■□□□ 1.08
TMEM260-202ENST00000538838 TLE3Q04726 772 aa21.83■■□□□ 1.08
TMEM260-202ENST00000538838 BNIP1Q12981 228 aa21.83■■□□□ 1.08
TMEM260-202ENST00000538838 CRTC2Q53ET0 693 aaPredicted RBP21.83■■□□□ 1.08
TMEM260-202ENST00000538838 RUNDC3AQ59EK9 446 aa21.83■■□□□ 1.08
TMEM260-202ENST00000538838 DCAF10Q5QP82 559 aa21.83■■□□□ 1.08
TMEM260-202ENST00000538838 HACD2Q6Y1H2 254 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms