RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 DHRS1Q96LJ7 313 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 GUCD1Q96NT3 240 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 TRNT1Q96Q11 434 aaKnown RBP13.9□□□□□ -0.18
ATL3-203ENST00000538786 SLC38A3Q99624 504 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 POLR1BQ9H9Y6 1135 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 ZNF556Q9HAH1 456 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 EQTNQ9NQ60 294 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 STARD5Q9NSY2 213 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 RHCGQ9UBD6 479 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 KCNE3Q9Y6H6 103 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 PRUNE2Q8WUY3 3088 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 CASC3O15234 703 aaKnown RBP13.9□□□□□ -0.18
ATL3-203ENST00000538786 KIF1CO43896 1103 aaKnown RBP13.9□□□□□ -0.18
ATL3-203ENST00000538786 SRPX2O60687 465 aaPredicted RBP13.9□□□□□ -0.18
ATL3-203ENST00000538786 ABCB7O75027 752 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 CPNE6O95741 557 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 CXCL12P48061 93 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 NUP107P57740 925 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 CXCR4P61073 352 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 SHC2P98077 582 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 DEFB110Q30KQ9 67 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 MFSD12Q6NUT3 480 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 OGFOD3Q6PK18 319 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 FAM111BQ6SJ93 734 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 ARHGEF39Q8N4T4 335 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 VANGL1Q8TAA9 524 aaPredicted RBP13.9□□□□□ -0.18
ATL3-203ENST00000538786 CNIH3Q8TBE1 160 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 TCTN2Q96GX1 697 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 NIPSNAP1Q9BPW8 284 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 TUBA1CQ9BQE3 449 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 NMNAT1Q9HAN9 279 aaPredicted RBP13.9□□□□□ -0.18
ATL3-203ENST00000538786 ANKHQ9HCJ1 492 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 VCX3AQ9NNX9 186 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 GIN1Q9NXP7 522 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 RSL24D1Q9UHA3 163 aaKnown RBP13.9□□□□□ -0.18
ATL3-203ENST00000538786 ACAD8Q9UKU7 415 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 SLC9A8Q9Y2E8 581 aa13.9□□□□□ -0.18
ATL3-203ENST00000538786 FGF17O60258 216 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 SEMA7AO75326 666 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 SLITRK5O94991 958 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 GPR75O95800 540 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 ANGPTL1O95841 491 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 AGR2O95994 175 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 ATP1B1P05026 303 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 JUNBP17275 347 aaPredicted RBP13.89□□□□□ -0.19
ATL3-203ENST00000538786 BCKDHBP21953 392 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 FUT4P22083 530 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 SMIM11AP58511 58 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 PMS2P3Q13401 168 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 PRTGQ2VWP7 1150 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 FAM214AQ32MH5 1076 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 ZNF628Q5EBL2 1059 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 GPR153Q6NV75 609 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 CDC73Q6P1J9 531 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 B3GNT6Q6ZMB0 384 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 DEF8Q6ZN54 512 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 OLIG3Q7RTU3 272 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 C16orf62Q7Z3J2 963 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 ALDH16A1Q8IZ83 802 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 DNAJC22Q8N4W6 341 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 BPIFB6Q8NFQ5 453 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 OR9Q2Q8NGE9 314 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 OR4D11Q8NGI4 311 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 ADAMTS15Q8TE58 950 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 DNASE2BQ8WZ79 361 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 MAP3K3Q99759 626 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 PINK1Q9BXM7 581 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 SLC38A1Q9H2H9 487 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 PTTG2Q9NZH5 202 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 ENOPH1Q9UHY7 261 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 DSPPQ9NZW4 1301 aa13.89□□□□□ -0.19
ATL3-203ENST00000538786 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.88□□□□□ -0.19
ATL3-203ENST00000538786 K7ESF4 209 aa13.88□□□□□ -0.19
ATL3-203ENST00000538786 SGK494L7N484 410 aa13.88□□□□□ -0.19
ATL3-203ENST00000538786 LGI1O95970 557 aa13.88□□□□□ -0.19
ATL3-203ENST00000538786 CBLP22681 906 aa13.88□□□□□ -0.19
ATL3-203ENST00000538786 RAB38P57729 211 aa13.88□□□□□ -0.19
ATL3-203ENST00000538786 MAD2L1BPQ15013 274 aaPredicted RBP13.88□□□□□ -0.19
ATL3-203ENST00000538786 DEFB133Q30KQ1 61 aa13.88□□□□□ -0.19
ATL3-203ENST00000538786 HEPHL1Q6MZM0 1159 aa13.88□□□□□ -0.19
ATL3-203ENST00000538786 B3GNT8Q7Z7M8 397 aa13.88□□□□□ -0.19
ATL3-203ENST00000538786 COMTD1Q86VU5 262 aa13.88□□□□□ -0.19
ATL3-203ENST00000538786 RBM45Q8IUH3 476 aaKnown RBP13.88□□□□□ -0.19
ATL3-203ENST00000538786 LACC1Q8IV20 430 aa13.88□□□□□ -0.19
ATL3-203ENST00000538786 CCDC71Q8IV32 467 aaPredicted RBP13.88□□□□□ -0.19
ATL3-203ENST00000538786 UBALD2Q8IYN6 164 aa13.88□□□□□ -0.19
ATL3-203ENST00000538786 PARP8Q8N3A8 854 aa13.88□□□□□ -0.19
ATL3-203ENST00000538786 TMEM52Q8NDY8 209 aa13.88□□□□□ -0.19
ATL3-203ENST00000538786 SLC35A4Q96G79 324 aa13.88□□□□□ -0.19
ATL3-203ENST00000538786 WFDC6Q9BQY6 131 aa13.88□□□□□ -0.19
ATL3-203ENST00000538786 TMCC3Q9ULS5 477 aa13.88□□□□□ -0.19
ATL3-203ENST00000538786 C19orf53Q9UNZ5 99 aaPredicted RBP13.88□□□□□ -0.19
ATL3-203ENST00000538786 PCDHGA6Q9Y5G7 932 aa13.88□□□□□ -0.19
ATL3-203ENST00000538786 A0A087WV62 115 aa13.88□□□□□ -0.19
ATL3-203ENST00000538786 LDB3O75112 727 aa13.88□□□□□ -0.19
ATL3-203ENST00000538786 OXSR1O95747 527 aaPredicted RBP13.88□□□□□ -0.19
ATL3-203ENST00000538786 H1F0P07305 194 aaKnown RBP13.88□□□□□ -0.19
ATL3-203ENST00000538786 CTSBP07858 339 aa13.88□□□□□ -0.19
ATL3-203ENST00000538786 HTR1AP08908 422 aa13.88□□□□□ -0.19
ATL3-203ENST00000538786 IFI6P09912 130 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms