RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 HSD3B2P26439 372 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 ABCD3P28288 659 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 GCKP35557 465 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 TIMP3P35625 211 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 MASP1P48740 699 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 XKP51811 444 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 NEK2P51955 445 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 FBXW4P57775 412 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 TRA2BP62995 288 aaKnown RBP7.92□□□□□ -1.14
DDB1-212ENST00000538470 PSPHP78330 225 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 DUSP8Q13202 625 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 CCNYL2Q5T2Q4 361 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 ARSKQ6UWY0 536 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 COMMD6Q7Z4G1 85 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 MILR1Q7Z6M3 343 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 LCA5Q86VQ0 697 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 LIX1LQ8IVB5 337 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 RELL2Q8NC24 303 aaPredicted RBP7.92□□□□□ -1.14
DDB1-212ENST00000538470 LRRN4CLQ8ND94 238 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 OR4F6Q8NGB9 312 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 DOK4Q8TEW6 326 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 ZNF483Q8TF39 744 aaPredicted RBP7.92□□□□□ -1.14
DDB1-212ENST00000538470 RNASE6Q93091 150 aaKnown RBP7.92□□□□□ -1.14
DDB1-212ENST00000538470 FMO2Q99518 471 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 SH3GL2Q99962 352 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 FAIM2Q9BWQ8 316 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 C1QTNF3Q9BXJ4 246 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 SHCBP1LQ9BZQ2 653 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 ZBTB26Q9HCK0 441 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 ALKBH4Q9NXW9 302 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 ZNF629Q9UEG4 869 aaPredicted RBP7.92□□□□□ -1.14
DDB1-212ENST00000538470 FETUBQ9UGM5 382 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 DMGDHQ9UI17 866 aaKnown RBP7.92□□□□□ -1.14
DDB1-212ENST00000538470 PSME2Q9UL46 239 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 EDARQ9UNE0 448 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 SLC12A4Q9UP95 1085 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 STK38LQ9Y2H1 464 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 PCDHA9Q9Y5H5 950 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 ABCA4P78363 2273 aa7.92□□□□□ -1.14
DDB1-212ENST00000538470 KIAA1549Q9HCM3 1950 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 MED12Q93074 2177 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 A0A087WUV0 522 aaPredicted RBP7.91□□□□□ -1.14
DDB1-212ENST00000538470 A0A1W2PS29 197 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 CD8B2A6NJW9 211 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 WASHC1A8K0Z3 465 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 A8MT66 165 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 SNPHO15079 494 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 CTAG2O75638 210 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 ACSL3O95573 720 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 IL2RAP01589 272 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 CSNK2A2P19784 350 aaPredicted RBP7.91□□□□□ -1.14
DDB1-212ENST00000538470 DNAJA1P31689 397 aaKnown RBP7.91□□□□□ -1.14
DDB1-212ENST00000538470 CEACAM8P31997 349 aaPredicted RBP7.91□□□□□ -1.14
DDB1-212ENST00000538470 DEKP35659 375 aaKnown RBP7.91□□□□□ -1.14
DDB1-212ENST00000538470 CASP3P42574 277 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 KIR2DL3P43628 341 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 TRPC1P48995 793 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 DLX5P56178 289 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 DCAF7P61962 342 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 SORDQ00796 357 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 PLCXD2Q0VAA5 305 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 GALNT1Q10472 559 aaPredicted RBP7.91□□□□□ -1.14
DDB1-212ENST00000538470 MAP4K2Q12851 820 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 CSTF3Q12996 717 aaKnown RBP7.91□□□□□ -1.14
DDB1-212ENST00000538470 SNTA1Q13424 505 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 PRICKLE4Q2TBC4 344 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 FLYWCH1Q4VC44 716 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 FNDC7Q5VTL7 733 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 NSUN5P2Q63ZY6 315 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 VASNQ6EMK4 673 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 SLC30A6Q6NXT4 461 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 SEM1Q6ZVN7 128 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 NUP54Q7Z3B4 507 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 SAMD14Q8IZD0 417 aaPredicted RBP7.91□□□□□ -1.14
DDB1-212ENST00000538470 ZNF675Q8TD23 568 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 DCAKDQ8WVC6 231 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 SELENOMQ8WWX9 145 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 KLHL29Q96CT2 875 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 NTNG2Q96CW9 530 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 ERP27Q96DN0 273 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 ZFP3Q96NJ6 502 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 NSUN5Q96P11 429 aaKnown RBP7.91□□□□□ -1.14
DDB1-212ENST00000538470 TIMP4Q99727 224 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 RHOXF2Q9BQY4 288 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 OSBPL11Q9BXB4 747 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 ITPAQ9BY32 194 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 NXF5Q9H1B4 397 aaKnown RBP7.91□□□□□ -1.14
DDB1-212ENST00000538470 METTL7AQ9H8H3 244 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 ZNF358Q9NW07 568 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 DNAJB12Q9NXW2 375 aaKnown RBP7.91□□□□□ -1.14
DDB1-212ENST00000538470 MAT2BQ9NZL9 334 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 PRODH2Q9UF12 536 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 ZNF639Q9UID6 485 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 CES1P1Q9UKY3 287 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 NFU1Q9UMS0 254 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 MED12LQ86YW9 2145 aa7.91□□□□□ -1.14
DDB1-212ENST00000538470 HRNRQ86YZ3 2850 aaPredicted RBP7.91□□□□□ -1.14
DDB1-212ENST00000538470 MPDZO75970 2070 aa7.9□□□□□ -1.14
DDB1-212ENST00000538470 FAM221AA4D161 298 aa7.9□□□□□ -1.14
DDB1-212ENST00000538470 MBD3L4A6NDZ8 208 aaPredicted RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms