RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, human

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-208	ENST00000538266	PLD3	Q8IV08	490 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	OR4N4	Q8N0Y3	316 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	DNAJC22	Q8N4W6	341 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	BMPER	Q8N8U9	685 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	L3MBTL4	Q8NA19	623 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	MFSD9	Q8NBP5	474 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	CAMKV	Q8NCB2	501 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	ZNF740	Q8NDX6	193 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	SRFBP1	Q8NEF9	429 aa	Known RBP	4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	OR7G3	Q8NG95	312 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	OR4F6	Q8NGB9	312 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	OR4K1	Q8NGD4	311 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	OR1L3	Q8NH93	324 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	HUS1B	Q8NHY5	278 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	ZCCHC10	Q8TBK6	192 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	RAB3IL1	Q8TBN0	382 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	METTL6	Q8TCB7	284 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	AGR3	Q8TD06	166 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	SLC13A3	Q8WWT9	602 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	KIAA1143	Q96AT1	154 aa	Predicted RBP	4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	ZNF501	Q96CX3	271 aa	Predicted RBP	4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	WDR34	Q96EX3	536 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	MVB12A	Q96EY5	273 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	ZNF503	Q96F45	646 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	NSL1	Q96IY1	281 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	SLC46A1	Q96NT5	459 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	GBP5	Q96PP8	586 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	FRG2B	Q96QU4	278 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	OR2A5	Q96R48	311 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	NR1H4	Q96RI1	486 aa	Predicted RBP	4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	MTERF1	Q99551	399 aa	Known RBP	4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	ZNF184	Q99676	751 aa	Predicted RBP	4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	NTMT1	Q9BV86	223 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	TMEM120A	Q9BXJ8	343 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	CADM1	Q9BY67	442 aa	Known RBP	4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	SLC29A3	Q9BZD2	475 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	B3GNT4	Q9C0J1	378 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	VCX3B	Q9H321	246 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	NT5DC2	Q9H857	520 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	COPS7B	Q9H9Q2	264 aa	Predicted RBP	4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	ANKH	Q9HCJ1	492 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	APMAP	Q9HDC9	416 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	PFDN4	Q9NQP4	134 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	PAPOLB	Q9NRJ5	636 aa	Known RBP	4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	CUTC	Q9NTM9	273 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	ARL8B	Q9NVJ2	186 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	FBXO34	Q9NWN3	711 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	NDE1	Q9NXR1	346 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	STX18	Q9P2W9	335 aa	Known RBP	4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	PILRA	Q9UKJ1	303 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	RNF11	Q9Y3C5	154 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	FIS1	Q9Y3D6	152 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	SNRNP200	O75643	2136 aa	Known RBP	4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	BPTF	Q12830	3046 aa		4.07	□□□□□ -1.76
SNHG1-208	ENST00000538266	VPS13A	Q96RL7	3174 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	CNOT1	A5YKK6	2376 aa	Known RBP	4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266		A0A1B0GX78	115 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266		A0A1W2PNU3	283 aa	Predicted RBP	4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	MED19	A0JLT2	244 aa	Predicted RBP	4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	ARHGAP10	A1A4S6	786 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	LRIT2	A6NDA9	550 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	MAGEB17	A8MXT2	336 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	CDRT15L2	A8MXV6	281 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	DIRC3	C9JPN6	131 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	FCHO1	O14526	889 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	KLF11	O14901	512 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	DSCR3	O14972	297 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	SLC16A6	O15403	523 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	P2RX6	O15547	441 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	ERI3	O43414	337 aa	Known RBP	4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	HCRTR1	O43613	425 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	OR4F21	O95013	312 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	CAPN1	P07384	714 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	CHRNG	P07510	517 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	UROS	P10746	265 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	PIM1	P11309	404 aa	Predicted RBP	4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	CD22	P20273	847 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	BGN	P21810	368 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	SLC6A2	P23975	617 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	SERPINB3	P29508	390 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	PGM1	P36871	562 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	CASP2	P42575	452 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	AVPR1B	P47901	424 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	GABRA4	P48169	554 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	SLC1A6	P48664	564 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	KRTAP10-2	P60368	255 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	ABCE1	P61221	599 aa	Known RBP	4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	AP2B1	P63010	937 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	DCD	P81605	110 aa	Known RBP	4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	TLE1	Q04724	770 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	ZNF33B	Q06732	778 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	ABHD18	Q0P651	414 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	GALNT1	Q10472	559 aa	Predicted RBP	4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	TRAF3	Q13114	568 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	CUL3	Q13618	768 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	FAM53B	Q14153	422 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	ZNF267	Q14586	743 aa	Predicted RBP	4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	IMPG1	Q17R60	797 aa		4.06	□□□□□ -1.76
SNHG1-208	ENST00000538266	HKDC1	Q2TB90	917 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms