RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 RAB11FIP5Q9BXF6 653 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 ERVK-6Q9BXR3 956 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 KRTAP1-5Q9BYS1 174 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 OCR1Q9BZK8 76 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 LRRCC1Q9C099 1032 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 VPS33BQ9H267 617 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 RNF41Q9H4P4 317 aaPredicted RBP4.44□□□□□ -1.7
PRKDC-208ENST00000536710 ECT2Q9H8V3 914 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 MDFICQ9P1T7 246 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 EPS15L1Q9UBC2 864 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 P2RX2Q9UBL9 471 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 FZR1Q9UM11 496 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 KLF2Q9Y5W3 355 aaPredicted RBP4.44□□□□□ -1.7
PRKDC-208ENST00000536710 CPQQ9Y646 472 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 SALL1Q9NSC2 1324 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 DCXO43602 365 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 RANBP6O60518 1105 aaKnown RBP4.43□□□□□ -1.7
PRKDC-208ENST00000536710 STK17BO94768 372 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 FCGR3AP08637 254 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 FOSL2P15408 326 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 UCP1P25874 307 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 PPP2R1BP30154 601 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 SPRP35270 261 aaPredicted RBP4.43□□□□□ -1.7
PRKDC-208ENST00000536710 ELAVL2Q12926 359 aaKnown RBP4.43□□□□□ -1.7
PRKDC-208ENST00000536710 BNIP1Q12981 228 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 LY6DQ14210 128 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 POM121L1PQ3SYA9 428 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 C14orf177Q52M58 125 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 BHLHA9Q7RTU4 235 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 LMNTD2Q8IXW0 634 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 ZNRF1Q8ND25 227 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 OR52J3Q8NH60 311 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 GIPC3Q8TF64 312 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 MCHR2Q969V1 340 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 SYAP1Q96A49 352 aaPredicted RBP4.43□□□□□ -1.7
PRKDC-208ENST00000536710 RAB3CQ96E17 227 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 CCDC51Q96ER9 411 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 CPXM1Q96SM3 734 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 ATF6BQ99941 703 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 THUMPD2Q9BTF0 503 aaKnown RBP4.43□□□□□ -1.7
PRKDC-208ENST00000536710 CABLES2Q9BTV7 478 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 WRAP53Q9BUR4 548 aaKnown RBP4.43□□□□□ -1.7
PRKDC-208ENST00000536710 CARD6Q9BX69 1037 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 ALG9Q9H6U8 611 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 COQ10BQ9H8M1 238 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 ATXN10Q9UBB4 475 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 EMCNQ9ULC0 261 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 CHMP2BQ9UQN3 213 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 MOB4Q9Y3A3 225 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 KIF3AQ9Y496 699 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 U3KQV3 271 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 NCAPD2Q15021 1401 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 PTPRUQ92729 1446 aa4.43□□□□□ -1.7
PRKDC-208ENST00000536710 A0A087WZY1 265 aa4.42□□□□□ -1.7
PRKDC-208ENST00000536710 A0A0A6YYD4 124 aa4.42□□□□□ -1.7
PRKDC-208ENST00000536710 BCLAF3A2AJT9 711 aaKnown RBP4.42□□□□□ -1.7
PRKDC-208ENST00000536710 PDXKO00764 312 aa4.42□□□□□ -1.7
PRKDC-208ENST00000536710 FRAT2O75474 233 aaPredicted RBP4.42□□□□□ -1.7
PRKDC-208ENST00000536710 OAS1P00973 400 aaKnown RBP4.42□□□□□ -1.7
PRKDC-208ENST00000536710 PTPN6P29350 595 aa4.42□□□□□ -1.7
PRKDC-208ENST00000536710 RFC2P35250 354 aa4.42□□□□□ -1.7
PRKDC-208ENST00000536710 MS4A2Q01362 244 aa4.42□□□□□ -1.7
PRKDC-208ENST00000536710 NAAAQ02083 359 aa4.42□□□□□ -1.7
PRKDC-208ENST00000536710 ACY1Q03154 408 aa4.42□□□□□ -1.7
PRKDC-208ENST00000536710 CD300CQ08708 224 aa4.42□□□□□ -1.7
PRKDC-208ENST00000536710 FCHO2Q0JRZ9 810 aa4.42□□□□□ -1.7
PRKDC-208ENST00000536710 PDZK1IP1Q13113 114 aa4.42□□□□□ -1.7
PRKDC-208ENST00000536710 MRGPRG-AS1Q2M3A8 158 aa4.42□□□□□ -1.7
PRKDC-208ENST00000536710 ZNF699Q32M78 642 aa4.42□□□□□ -1.7
PRKDC-208ENST00000536710 ADPRMQ3LIE5 342 aa4.42□□□□□ -1.7
PRKDC-208ENST00000536710 ACSF3Q4G176 576 aaPredicted RBP4.42□□□□□ -1.7
PRKDC-208ENST00000536710 BEND6Q5SZJ8 279 aaPredicted RBP4.42□□□□□ -1.7
PRKDC-208ENST00000536710 WDR25Q64LD2 544 aaPredicted RBP4.42□□□□□ -1.7
PRKDC-208ENST00000536710 APOOLQ6UXV4 268 aa4.42□□□□□ -1.7
PRKDC-208ENST00000536710 ZNF497Q6ZNH5 498 aa4.42□□□□□ -1.7
PRKDC-208ENST00000536710 MOB2Q70IA6 237 aa4.42□□□□□ -1.7
PRKDC-208ENST00000536710 RPAINQ86UA6 219 aa4.42□□□□□ -1.7
PRKDC-208ENST00000536710 VPS36Q86VN1 386 aa4.42□□□□□ -1.7
PRKDC-208ENST00000536710 PRSS33Q8NF86 280 aa4.42□□□□□ -1.7
PRKDC-208ENST00000536710 OR4F17Q8NGA8 305 aa4.42□□□□□ -1.7
PRKDC-208ENST00000536710 LHX4Q969G2 390 aa4.42□□□□□ -1.7
PRKDC-208ENST00000536710 BIRC7Q96CA5 298 aa4.42□□□□□ -1.7
PRKDC-208ENST00000536710 OR4F4Q96R69 305 aa4.42□□□□□ -1.7
PRKDC-208ENST00000536710 FICDQ9BVA6 458 aa4.42□□□□□ -1.7
PRKDC-208ENST00000536710 GPR174Q9BXC1 333 aa4.42□□□□□ -1.7
PRKDC-208ENST00000536710 TUBB1Q9H4B7 451 aa4.42□□□□□ -1.7
PRKDC-208ENST00000536710 JPT2Q9H910 190 aa4.42□□□□□ -1.7
PRKDC-208ENST00000536710 ADGRL4Q9HBW9 690 aa4.42□□□□□ -1.7
PRKDC-208ENST00000536710 A0A0J9YWU9 116 aa4.41□□□□□ -1.7
PRKDC-208ENST00000536710 A0A0U1RQV5 110 aa4.41□□□□□ -1.7
PRKDC-208ENST00000536710 NDC80O14777 642 aa4.41□□□□□ -1.7
PRKDC-208ENST00000536710 CLDN3O15551 220 aa4.41□□□□□ -1.7
PRKDC-208ENST00000536710 PEX11AO75192 247 aa4.41□□□□□ -1.7
PRKDC-208ENST00000536710 APBB3O95704 486 aa4.41□□□□□ -1.7
PRKDC-208ENST00000536710 ECDO95905 644 aaPredicted RBP4.41□□□□□ -1.7
PRKDC-208ENST00000536710 ANXA4P09525 319 aaPredicted RBP4.41□□□□□ -1.7
PRKDC-208ENST00000536710 SLC35G4P0C7Q5 338 aa4.41□□□□□ -1.7
PRKDC-208ENST00000536710 GSTT2P0CG29 244 aa4.41□□□□□ -1.7
PRKDC-208ENST00000536710 GSTT2BP0CG30 244 aa4.41□□□□□ -1.7
PRKDC-208ENST00000536710 CALCBP10092 127 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms