RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 KCTD15Q96SI1 283 aaPredicted RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 NIPSNAP1Q9BPW8 284 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 DPH2Q9BQC3 489 aaPredicted RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 ABCG5Q9H222 651 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 PRDM12Q9H4Q4 367 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 FZD3Q9NPG1 666 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 LHX9Q9NQ69 397 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 EXOSC3Q9NQT5 275 aaKnown RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 SDR39U1Q9NRG7 319 aaPredicted RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 SLC25A37Q9NYZ2 338 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 MAGEL2Q9UJ55 1249 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 MID2Q9UJV3 735 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 HCN2Q9UL51 889 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 MMACHCQ9Y4U1 282 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 ASB1Q9Y576 335 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 A3GALT2U3KPV4 340 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 DOCK3Q8IZD9 2030 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 A0A075B6Q4 140 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 C2orf92A0A1B0GVN3 265 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 BBIP1A8MTZ0 92 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 AZIN1O14977 448 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 KCNAB3O43448 404 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 FMO6PO60774 539 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 ENDOD1O94919 500 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 GDF11O95390 407 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 MBP02144 154 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 PMP2P02689 132 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 EBLN1P0CF75 366 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 PRSS56P0CW18 603 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 MAPTP10636 758 aaKnown RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 ZNF8P17098 575 aaPredicted RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 SHC1P29353 583 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 LCN1P31025 176 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 BTCP35070 178 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 SREBF1P36956 1147 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 CD79BP40259 229 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 ADCYAP1R1P41586 468 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 MAGEA6P43360 314 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 ASPAP45381 313 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 HTR6P50406 440 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 MVDP53602 400 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 EEFSECP57772 596 aaKnown RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 TAS2R60P59551 318 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 RPS25P62851 125 aaKnown RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 UBE2IP63279 158 aaKnown RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 TCP10Q12799 353 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 RCAN2Q14206 197 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 SSPNQ14714 243 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 EIF4HQ15056 248 aaKnown RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 CRB2Q5IJ48 1285 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 ZNF678Q5SXM1 525 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 SFRP4Q6FHJ7 346 aaPredicted RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 OR7E24Q6IFN5 339 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 FAAP20Q6NZ36 180 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 MZT2BQ6NZ67 158 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 ARHGAP11AQ6P4F7 1023 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 CLEC2AQ6UVW9 174 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 TMEM107Q6UX40 140 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 ESPNLQ6ZVH7 1005 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 MRPL10Q7Z7H8 261 aaKnown RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 MON1AQ86VX9 555 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 DPP10Q8N608 796 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 ZNF548Q8NEK5 533 aaPredicted RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 FAM46DQ8NEK8 389 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 MYLIPQ8WY64 445 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 ACOT12Q8WYK0 555 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 S100PBPQ96BU1 408 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 OTUB1Q96FW1 271 aaPredicted RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 LRR1Q96L50 414 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 SPATA13Q96N96 652 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 NAA11Q9BSU3 229 aaPredicted RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 C11orf84Q9BUA3 381 aaPredicted RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 GGACTQ9BVM4 153 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 OPN3Q9H1Y3 402 aaPredicted RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 DDX31Q9H8H2 851 aaKnown RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 C3orf14Q9HBI5 128 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 SLC6A20Q9NP91 592 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 OLA1Q9NTK5 396 aaKnown RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 DNAJC27Q9NZQ0 273 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 RBPJLQ9UBG7 517 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 CD84Q9UIB8 345 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 KIF25Q9UIL4 384 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 POMT2Q9UKY4 750 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 SNX10Q9Y5X0 201 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 LCTP09848 1927 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 SHROOM3Q8TF72 1996 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 FAM221BA6H8Z2 402 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 OR6C76A6NM76 312 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 H7C0S8 307 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 HAS3O00219 553 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 WRBO00258 174 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 PEX10O60683 326 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 NIPSNAP2O75323 286 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 CSO75390 466 aaKnown RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 EEDO75530 441 aaKnown RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 GJB3O75712 270 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 ZIC2O95409 532 aaPredicted RBP3.53□□□□□ -1.84
MCF2-210ENST00000536274 TIMP1P01033 207 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 IL6P05231 212 aa3.53□□□□□ -1.84
MCF2-210ENST00000536274 HCKP08631 526 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms