RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 ZNF24P17028 368 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 GRK2P25098 689 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 FEN1P39748 380 aaKnown RBP9.07□□□□□ -0.96
NUP98-220ENST00000533346 CA7P43166 264 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 PPICP45877 212 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 TMED10P49755 219 aaKnown RBP9.07□□□□□ -0.96
NUP98-220ENST00000533346 PMP22Q01453 160 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 C2orf80Q0P641 193 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 FOXO1Q12778 655 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 DUSP8Q13202 625 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 PDE7AQ13946 482 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 MLC1Q15049 377 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 ZNF750Q32MQ0 723 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 RFTN2Q52LD8 501 aaPredicted RBP9.07□□□□□ -0.96
NUP98-220ENST00000533346 SPDYAQ5MJ70 313 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 C6orf163Q5TEZ5 329 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 FAM111BQ6SJ93 734 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 SCIMPQ6UWF3 145 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 GFRALQ6UXV0 394 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 GK5Q6ZS86 529 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 NUDCD3Q8IVD9 361 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 CCDC116Q8IYX3 515 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 MMP21Q8N119 569 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 GHDCQ8N2G8 530 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 FBXW8Q8N3Y1 598 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 NATD1Q8N6N6 113 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 TWIST2Q8WVJ9 160 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 HOXB13Q92826 284 aaPredicted RBP9.07□□□□□ -0.96
NUP98-220ENST00000533346 LCORQ96JN0 433 aaPredicted RBP9.07□□□□□ -0.96
NUP98-220ENST00000533346 PPP3R2Q96LZ3 170 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 IL1RL2Q9HB29 575 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 PFDN4Q9NQP4 134 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 GIMAP4Q9NUV9 329 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 NTMQ9P121 344 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 ZDHHC2Q9UIJ5 367 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 CNOT11Q9UKZ1 510 aaKnown RBP9.07□□□□□ -0.96
NUP98-220ENST00000533346 GPR55Q9Y2T6 319 aaPredicted RBP9.07□□□□□ -0.96
NUP98-220ENST00000533346 NPFFR2Q9Y5X5 522 aa9.07□□□□□ -0.96
NUP98-220ENST00000533346 NINQ8N4C6 2090 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 TTC36A6NLP5 189 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 TP53I11O14683 189 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 WISP2O76076 250 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 AGFG2O95081 481 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 UNC5CO95185 931 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 SNX4O95219 450 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 P04436 131 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 SDC1P18827 310 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 ASMTP46597 345 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 ALDH9A1P49189 494 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 PER3P56645 1201 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 NRG3P56975 720 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 C21orf58P58505 322 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 RPP38P78345 283 aaKnown RBP9.06□□□□□ -0.96
NUP98-220ENST00000533346 BTKQ06187 659 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 SNTA1Q13424 505 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 MPP2Q14168 576 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 RPS6KA2Q15349 733 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 PRSS53Q2L4Q9 553 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 TRMT12Q53H54 448 aaKnown RBP9.06□□□□□ -0.96
NUP98-220ENST00000533346 MTFR2Q6P444 385 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 PAOXQ6QHF9 649 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 NUP54Q7Z3B4 507 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 SPPL2CQ8IUH8 684 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 RAB3IL1Q8TBN0 382 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 SPPL2AQ8TCT8 520 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 RNF138Q8WVD3 245 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 TLCD1Q96CP7 247 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 SLC35A4Q96G79 324 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 BTBD9Q96Q07 612 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 ANGPTL4Q9BY76 406 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 BRINP2Q9C0B6 783 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 REEP4Q9H6H4 257 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 TMBIM4Q9HC24 238 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 ACKR4Q9NPB9 350 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 ASIC5Q9NY37 505 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 ENTPD4Q9Y227 616 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 OSGIN2Q9Y236 505 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 RAP2CQ9Y3L5 183 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 POLR3HQ9Y535 204 aaPredicted RBP9.06□□□□□ -0.96
NUP98-220ENST00000533346 PCDHGB3Q9Y5G1 929 aa9.06□□□□□ -0.96
NUP98-220ENST00000533346 NCKAP5O14513 1909 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 PHF3Q92576 2039 aaKnown RBP9.05□□□□□ -0.96
NUP98-220ENST00000533346 PRRC2CQ9Y520 2896 aaKnown RBP9.05□□□□□ -0.96
NUP98-220ENST00000533346 RP1L1Q8IWN7 2480 aaPredicted RBP9.05□□□□□ -0.96
NUP98-220ENST00000533346 PINLYPA6NC86 204 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 OR14I1A6ND48 311 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 FRG2CA6NGY1 282 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 NPIPA5E9PKD4 350 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 ACOT7O00154 380 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 PIP5K1BO14986 540 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 SUSD5O60279 629 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 ABCB7O75027 752 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 TRIM3O75382 744 aaPredicted RBP9.05□□□□□ -0.96
NUP98-220ENST00000533346 LYPLA1O75608 230 aaPredicted RBP9.05□□□□□ -0.96
NUP98-220ENST00000533346 PPM1BO75688 479 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 ABCB1P08183 1280 aaPredicted RBP9.05□□□□□ -0.96
NUP98-220ENST00000533346 LINC00032P0C843 101 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 CT45A8P0DMV1 189 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 CT45A9P0DMV2 189 aa9.05□□□□□ -0.96
NUP98-220ENST00000533346 CCL3P10147 92 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms