RNA–Protein interactions for RNA: ENST00000531032.5

VPS28-214, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 1 (best)

Gene VPS28, Length 573 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-214ENST00000531032 RMND5BQ96G75 393 aaPredicted RBP10.38□□□□□ -0.75
VPS28-214ENST00000531032 GNRHR2Q96P88 292 aa10.38□□□□□ -0.75
VPS28-214ENST00000531032 MRPL1Q9BYD6 325 aaKnown RBP10.38□□□□□ -0.75
VPS28-214ENST00000531032 LIME1Q9H400 295 aa10.38□□□□□ -0.75
VPS28-214ENST00000531032 ACSS3Q9H6R3 686 aa10.38□□□□□ -0.75
VPS28-214ENST00000531032 ZBTB26Q9HCK0 441 aa10.38□□□□□ -0.75
VPS28-214ENST00000531032 ZDHHC18Q9NUE0 388 aa10.38□□□□□ -0.75
VPS28-214ENST00000531032 PCTPQ9UKL6 214 aa10.38□□□□□ -0.75
VPS28-214ENST00000531032 MAP1AP78559 2803 aaPredicted RBP10.38□□□□□ -0.75
VPS28-214ENST00000531032 MBD3L4A6NDZ8 208 aaPredicted RBP10.37□□□□□ -0.75
VPS28-214ENST00000531032 MBD3L3A6NE82 208 aaPredicted RBP10.37□□□□□ -0.75
VPS28-214ENST00000531032 MBD3L5A6NJ08 208 aaPredicted RBP10.37□□□□□ -0.75
VPS28-214ENST00000531032 CD8B2A6NJW9 211 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 ACSL3O95573 720 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 ATP1B1P05026 303 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 ABCB1P08183 1280 aaPredicted RBP10.37□□□□□ -0.75
VPS28-214ENST00000531032 RBP1P09455 135 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 CD99P14209 185 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 PORP16435 677 aaPredicted RBP10.37□□□□□ -0.75
VPS28-214ENST00000531032 NAGAP17050 411 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 BMP7P18075 431 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 NT5EP21589 574 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 PTPN6P29350 595 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 ARL1P40616 181 aaPredicted RBP10.37□□□□□ -0.75
VPS28-214ENST00000531032 MAGEA12P43365 314 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 XKP51811 444 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 CCNG1P51959 295 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 MAPK12P53778 367 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 DAZAP2Q15038 168 aaPredicted RBP10.37□□□□□ -0.75
VPS28-214ENST00000531032 GGTA1PQ4G0N0 100 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 EIPR1Q53HC9 387 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 DCST1Q5T197 706 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 C6orf163Q5TEZ5 329 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 TIGD3Q6B0B8 471 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 TAOK1Q7L7X3 1001 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 PAGE2Q7Z2X7 111 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 TGIF2LYQ8IUE0 185 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 PRR22Q8IZ63 422 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 VWA5B2Q8N398 1253 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 METTL4Q8N3J2 472 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 MBD3L2Q8NHZ7 208 aaPredicted RBP10.37□□□□□ -0.75
VPS28-214ENST00000531032 TRPC4APQ8TEL6 797 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 IFT81Q8WYA0 676 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 ATP6V1E2Q96A05 226 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 PHF21BQ96EK2 531 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 WDYHV1Q96HA8 205 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 NSUN5Q96P11 429 aaKnown RBP10.37□□□□□ -0.75
VPS28-214ENST00000531032 FMO2Q99518 471 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 UGT2B28Q9BY64 529 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 FUT8Q9BYC5 575 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 TSPYL1Q9H0U9 437 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 NXF5Q9H1B4 397 aaKnown RBP10.37□□□□□ -0.75
VPS28-214ENST00000531032 VPS11Q9H270 941 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 AHSPQ9NZD4 102 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 FETUBQ9UGM5 382 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 CES1P1Q9UKY3 287 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 CBLCQ9ULV8 474 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 TMCO1Q9UM00 188 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 DTX4Q9Y2E6 619 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 SLC6A5Q9Y345 797 aa10.37□□□□□ -0.75
VPS28-214ENST00000531032 DOCK7Q96N67 2140 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 C1orf226A1L170 272 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 PPM1BO75688 479 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 INHBAP08476 426 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 KRT15P19012 456 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 SOX18P35713 384 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 MGAT2Q10469 447 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 MAP4K2Q12851 820 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 IFT88Q13099 833 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 CEBPEQ15744 281 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 PRICKLE4Q2TBC4 344 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 WIPI1Q5MNZ9 446 aaPredicted RBP10.36□□□□□ -0.75
VPS28-214ENST00000531032 CCNYL2Q5T2Q4 361 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 UBAP2Q5T6F2 1119 aaKnown RBP10.36□□□□□ -0.75
VPS28-214ENST00000531032 TTC19Q6DKK2 380 aaPredicted RBP10.36□□□□□ -0.75
VPS28-214ENST00000531032 SLC48A1Q6P1K1 146 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 COMMD6Q7Z4G1 85 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 CDC20BQ86Y33 519 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 RELL1Q8IUW5 271 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 MMGT1Q8N4V1 131 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 OR1J4Q8NGS1 313 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 KIF18AQ8NI77 898 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 SLC44A1Q8WWI5 657 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 HGDQ93099 445 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 ABTB1Q969K4 478 aaPredicted RBP10.36□□□□□ -0.75
VPS28-214ENST00000531032 CTHRC1Q96CG8 243 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 POM121Q96HA1 1249 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 ALPK1Q96QP1 1244 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 METTL7AQ9H8H3 244 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 CALHM2Q9HA72 323 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 NINJ2Q9NZG7 142 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 MAT2BQ9NZL9 334 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 JKAMPQ9P055 326 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 XPR1Q9UBH6 696 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 ZNF639Q9UID6 485 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 EDARQ9UNE0 448 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 CAMK2AQ9UQM7 478 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 CFL2Q9Y281 166 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 PLEKHA6Q9Y2H5 1048 aa10.36□□□□□ -0.75
VPS28-214ENST00000531032 PCDHA9Q9Y5H5 950 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms