RNA–Protein interactions for RNA: ENST00000530836.5

VPS28-212, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-212ENST00000530836 PCDHGA8Q9Y5G5 932 aa19.85■□□□□ 0.77
VPS28-212ENST00000530836 A0A1W2PS29 197 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 DUXAA6NLW8 204 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 C5orf58C9J3I9 102 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 TIPRLO75663 272 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 PRKD3O94806 890 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 AGR2O95994 175 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 CAPNS1P04632 268 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 ALAS2P22557 587 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 STX4Q12846 297 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 SLC13A2Q13183 592 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 RTP5Q14D33 572 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 ZNF628Q5EBL2 1059 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 TNFAIP8L2Q6P589 184 aaPredicted RBP19.84■□□□□ 0.77
VPS28-212ENST00000530836 ZC3H7AQ8IWR0 971 aaKnown RBP19.84■□□□□ 0.77
VPS28-212ENST00000530836 NFKBIDQ8NI38 313 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 MS4A4EQ96PG1 132 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 PELOQ9BRX2 385 aaKnown RBP19.84■□□□□ 0.77
VPS28-212ENST00000530836 TMEM121BQ9BXQ6 578 aaPredicted RBP19.84■□□□□ 0.77
VPS28-212ENST00000530836 PRTFDC1Q9NRG1 225 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 OCIAD1Q9NX40 245 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 NDOR1Q9UHB4 597 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 CEP295Q9C0D2 2601 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 PMS2P1A4D2B8 440 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 HMGN4O00479 90 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 PLOD3O60568 738 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 HMGN2P05204 90 aaKnown RBP19.84■□□□□ 0.77
VPS28-212ENST00000530836 CCL4P13236 92 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 PRKAG1P54619 331 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 CASP9P55211 416 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 GABREP78334 506 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 IGLV3-21P80748 117 aaPredicted RBP19.84■□□□□ 0.77
VPS28-212ENST00000530836 SERTAD2Q14140 314 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 MYBPC3Q14896 1274 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 CRB2Q5IJ48 1285 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 ST13P4Q8IZP2 240 aaPredicted RBP19.84■□□□□ 0.77
VPS28-212ENST00000530836 LGI4Q8N135 537 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 BMPERQ8N8U9 685 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 MAGED4Q96JG8 741 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 OR51I1Q9H343 314 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 ZNF304Q9HCX3 659 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 RARRES3Q9UL19 164 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 MMACHCQ9Y4U1 282 aa19.84■□□□□ 0.77
VPS28-212ENST00000530836 SYNDIG1LA6NDD5 238 aa19.83■□□□□ 0.76
VPS28-212ENST00000530836 EFCAB7A8K855 629 aa19.83■□□□□ 0.76
VPS28-212ENST00000530836 B4E171 279 aa19.83■□□□□ 0.76
VPS28-212ENST00000530836 UPK1AO00322 258 aa19.83■□□□□ 0.76
VPS28-212ENST00000530836 PDE9AO76083 593 aa19.83■□□□□ 0.76
VPS28-212ENST00000530836 SOX30O94993 753 aa19.83■□□□□ 0.76
VPS28-212ENST00000530836 HBQ1P09105 142 aa19.83■□□□□ 0.76
VPS28-212ENST00000530836 TFPTP0C1Z6 253 aa19.83■□□□□ 0.76
VPS28-212ENST00000530836 JMJD7P0C870 316 aa19.83■□□□□ 0.76
VPS28-212ENST00000530836 GALNSP34059 522 aa19.83■□□□□ 0.76
VPS28-212ENST00000530836 TSPAN7P41732 249 aa19.83■□□□□ 0.76
VPS28-212ENST00000530836 XCR1P46094 333 aa19.83■□□□□ 0.76
VPS28-212ENST00000530836 PCBP3P57721 371 aaKnown RBP19.83■□□□□ 0.76
VPS28-212ENST00000530836 MAT1AQ00266 395 aaKnown RBP19.83■□□□□ 0.76
VPS28-212ENST00000530836 FOXK2Q01167 660 aa19.83■□□□□ 0.76
VPS28-212ENST00000530836 LTB4RQ15722 352 aa19.83■□□□□ 0.76
VPS28-212ENST00000530836 ATP6AP1Q15904 470 aa19.83■□□□□ 0.76
VPS28-212ENST00000530836 RHBDD2Q6NTF9 364 aa19.83■□□□□ 0.76
VPS28-212ENST00000530836 ZCCHC12Q6PEW1 402 aa19.83■□□□□ 0.76
VPS28-212ENST00000530836 ENPP6Q6UWR7 440 aa19.83■□□□□ 0.76
VPS28-212ENST00000530836 ANKFN1Q8N957 763 aa19.83■□□□□ 0.76
VPS28-212ENST00000530836 LZICQ8WZA0 190 aa19.83■□□□□ 0.76
VPS28-212ENST00000530836 KAT2AQ92830 837 aa19.83■□□□□ 0.76
VPS28-212ENST00000530836 CENPNQ96H22 339 aaPredicted RBP19.83■□□□□ 0.76
VPS28-212ENST00000530836 BDH2Q9BUT1 245 aa19.83■□□□□ 0.76
VPS28-212ENST00000530836 ACTRT3Q9BYD9 372 aa19.83■□□□□ 0.76
VPS28-212ENST00000530836 VCXQ9H320 206 aa19.83■□□□□ 0.76
VPS28-212ENST00000530836 SIDT1Q9NXL6 827 aaKnown RBP19.83■□□□□ 0.76
VPS28-212ENST00000530836 C19orf53Q9UNZ5 99 aaPredicted RBP19.83■□□□□ 0.76
VPS28-212ENST00000530836 SUV39H1O43463 412 aa19.82■□□□□ 0.76
VPS28-212ENST00000530836 OR10H2O60403 315 aa19.82■□□□□ 0.76
VPS28-212ENST00000530836 DEAF1O75398 565 aaPredicted RBP19.82■□□□□ 0.76
VPS28-212ENST00000530836 ZNF682O95780 498 aa19.82■□□□□ 0.76
VPS28-212ENST00000530836 LDLRP01130 860 aa19.82■□□□□ 0.76
VPS28-212ENST00000530836 ITIH1P19827 911 aa19.82■□□□□ 0.76
VPS28-212ENST00000530836 NT5EP21589 574 aa19.82■□□□□ 0.76
VPS28-212ENST00000530836 CLCN2P51788 898 aa19.82■□□□□ 0.76
VPS28-212ENST00000530836 RPS26P62854 115 aaKnown RBP19.82■□□□□ 0.76
VPS28-212ENST00000530836 MC2RQ01718 297 aa19.82■□□□□ 0.76
VPS28-212ENST00000530836 LASP1Q14847 261 aaKnown RBP19.82■□□□□ 0.76
VPS28-212ENST00000530836 PRICKLE4Q2TBC4 344 aa19.82■□□□□ 0.76
VPS28-212ENST00000530836 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.82■□□□□ 0.76
VPS28-212ENST00000530836 PRAMEF8Q5VWM4 474 aa19.82■□□□□ 0.76
VPS28-212ENST00000530836 PRAMEF7Q5VXH5 474 aa19.82■□□□□ 0.76
VPS28-212ENST00000530836 OR7G2Q8NG99 324 aa19.82■□□□□ 0.76
VPS28-212ENST00000530836 SLC38A5Q8WUX1 472 aa19.82■□□□□ 0.76
VPS28-212ENST00000530836 NXPE2Q96DL1 559 aa19.82■□□□□ 0.76
VPS28-212ENST00000530836 RBM18Q96H35 190 aaKnown RBP19.82■□□□□ 0.76
VPS28-212ENST00000530836 ZNF578Q96N58 590 aaPredicted RBP19.82■□□□□ 0.76
VPS28-212ENST00000530836 SLC46A1Q96NT5 459 aa19.82■□□□□ 0.76
VPS28-212ENST00000530836 OR6C1Q96RD1 312 aa19.82■□□□□ 0.76
VPS28-212ENST00000530836 TACO1Q9BSH4 297 aaKnown RBP19.82■□□□□ 0.76
VPS28-212ENST00000530836 SLC7A5P2Q9GIP4 190 aa19.82■□□□□ 0.76
VPS28-212ENST00000530836 C8orf4Q9NR00 106 aa19.82■□□□□ 0.76
VPS28-212ENST00000530836 TRPC4Q9UBN4 977 aa19.82■□□□□ 0.76
VPS28-212ENST00000530836 PISDQ9UG56 409 aa19.82■□□□□ 0.76
VPS28-212ENST00000530836 CNOT11Q9UKZ1 510 aaKnown RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms