RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 TRIM45Q9H8W5 580 aaPredicted RBP8.38□□□□□ -1.07
CMTM1-210ENST00000528441 CXorf21Q9HAI6 301 aa8.38□□□□□ -1.07
CMTM1-210ENST00000528441 IL1RL2Q9HB29 575 aa8.38□□□□□ -1.07
CMTM1-210ENST00000528441 EML4Q9HC35 981 aaKnown RBP8.38□□□□□ -1.07
CMTM1-210ENST00000528441 TUBA8Q9NY65 449 aaPredicted RBP8.38□□□□□ -1.07
CMTM1-210ENST00000528441 OR10H1Q9Y4A9 318 aa8.38□□□□□ -1.07
CMTM1-210ENST00000528441 HIVEP3Q5T1R4 2406 aa8.38□□□□□ -1.07
CMTM1-210ENST00000528441 EML6Q6ZMW3 1958 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 C15orf38-AP3S2A0A0A6YYH1 394 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 TRGV5A0A0B4J1U4 118 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 PINLYPA6NC86 204 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 TMEM200CA6NKL6 621 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 FIGNL2A6NMB9 653 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 FAM90A27PA6NNH2 459 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 G3V2L1 256 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 SLC28A1O00337 649 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 GNB5O14775 395 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 RGS16O15492 202 aaPredicted RBP8.37□□□□□ -1.07
CMTM1-210ENST00000528441 TRIM13O60858 407 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 SEC22BO75396 215 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 REM1O75628 298 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 BCAS2O75934 225 aaPredicted RBP8.37□□□□□ -1.07
CMTM1-210ENST00000528441 IGKV3-11P04433 115 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 UROSP10746 265 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 DRD2P14416 443 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 COX6B1P14854 86 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 HTR1EP28566 365 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 GALNSP34059 522 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 TRPC1P48995 793 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 NCBP2P52298 156 aaKnown RBP eCLIP8.37□□□□□ -1.07
CMTM1-210ENST00000528441 FOXA1P55317 472 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 FBXW4P57775 412 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 MRPS35P82673 323 aaKnown RBP8.37□□□□□ -1.07
CMTM1-210ENST00000528441 GALNTL6Q49A17 601 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 RNFT1Q5M7Z0 435 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 TBCELQ5QJ74 424 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 WLSQ5T9L3 541 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 CLEC6AQ6EIG7 209 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 XKRXQ6PP77 449 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 BNC2Q6ZN30 1099 aaPredicted RBP8.37□□□□□ -1.07
CMTM1-210ENST00000528441 FRMD7Q6ZUT3 714 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 NCCRP1Q6ZVX7 275 aaPredicted RBP8.37□□□□□ -1.07
CMTM1-210ENST00000528441 ZNF227Q86WZ6 799 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 SIAH3Q8IW03 269 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 TMEM251Q8N6I4 163 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 OR9A2Q8NGT5 310 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 C16orf52Q8NHV5 167 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 C16orf78Q8WTQ4 265 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 MZB1Q8WU39 189 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 KAT2AQ92830 837 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 GFM2Q969S9 779 aaKnown RBP8.37□□□□□ -1.07
CMTM1-210ENST00000528441 SARAFQ96BY9 339 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 ZBTB9Q96C00 473 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 CHMP6Q96FZ7 201 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 TP63Q9H3D4 680 aaPredicted RBP8.37□□□□□ -1.07
CMTM1-210ENST00000528441 DEPPQ9NTK1 212 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 EHD3Q9NZN3 535 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 CNIH4Q9P003 139 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 ZNF225Q9UK10 706 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 EMCNQ9ULC0 261 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 MEMO1Q9Y316 297 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 PLLPQ9Y342 182 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 NPFFR2Q9Y5X5 522 aa8.37□□□□□ -1.07
CMTM1-210ENST00000528441 FLNBO75369 2602 aaKnown RBP8.37□□□□□ -1.07
CMTM1-210ENST00000528441 SPTBN1Q01082 2364 aaKnown RBP8.36□□□□□ -1.07
CMTM1-210ENST00000528441 HECTD1Q9ULT8 2610 aa8.36□□□□□ -1.07
CMTM1-210ENST00000528441 RELNP78509 3460 aa8.36□□□□□ -1.07
CMTM1-210ENST00000528441 WDR91A4D1P6 747 aa8.36□□□□□ -1.07
CMTM1-210ENST00000528441 BCKDKO14874 412 aa8.36□□□□□ -1.07
CMTM1-210ENST00000528441 AZIN1O14977 448 aa8.36□□□□□ -1.07
CMTM1-210ENST00000528441 HNRNPRO43390 633 aaKnown RBP8.36□□□□□ -1.07
CMTM1-210ENST00000528441 ZNF354AO60765 605 aaPredicted RBP8.36□□□□□ -1.07
CMTM1-210ENST00000528441 COQ9O75208 318 aa8.36□□□□□ -1.07
CMTM1-210ENST00000528441 RSL1D1O76021 490 aaKnown RBP8.36□□□□□ -1.07
CMTM1-210ENST00000528441 WISP2O76076 250 aa8.36□□□□□ -1.07
CMTM1-210ENST00000528441 CLDN14O95500 239 aa8.36□□□□□ -1.07
CMTM1-210ENST00000528441 JUNP05412 331 aaKnown RBP8.36□□□□□ -1.07
CMTM1-210ENST00000528441 FBXO45P0C2W1 286 aa8.36□□□□□ -1.07
CMTM1-210ENST00000528441 PCSK2P16519 638 aa8.36□□□□□ -1.07
CMTM1-210ENST00000528441 DDX5P17844 614 aaKnown RBP8.36□□□□□ -1.07
CMTM1-210ENST00000528441 MPIP34949 423 aa8.36□□□□□ -1.07
CMTM1-210ENST00000528441 DCTP40126 519 aa8.36□□□□□ -1.07
CMTM1-210ENST00000528441 GSTM5P46439 218 aa8.36□□□□□ -1.07
CMTM1-210ENST00000528441 DNAJB13P59910 316 aa8.36□□□□□ -1.07
CMTM1-210ENST00000528441 RPL38P63173 70 aaKnown RBP8.36□□□□□ -1.07
CMTM1-210ENST00000528441 ZNHIT3Q15649 155 aaPredicted RBP8.36□□□□□ -1.07
CMTM1-210ENST00000528441 CMPK2Q5EBM0 449 aa8.36□□□□□ -1.07
CMTM1-210ENST00000528441 SP5Q6BEB4 398 aaPredicted RBP8.36□□□□□ -1.07
CMTM1-210ENST00000528441 RETREG3Q86VR2 466 aa8.36□□□□□ -1.07
CMTM1-210ENST00000528441 DOLPP1Q86YN1 238 aa8.36□□□□□ -1.07
CMTM1-210ENST00000528441 TICAM1Q8IUC6 712 aa8.36□□□□□ -1.07
CMTM1-210ENST00000528441 ARMC10Q8N2F6 343 aa8.36□□□□□ -1.07
CMTM1-210ENST00000528441 FBXW8Q8N3Y1 598 aa8.36□□□□□ -1.07
CMTM1-210ENST00000528441 TMEM151AQ8N4L1 468 aa8.36□□□□□ -1.07
CMTM1-210ENST00000528441 TCP10LQ8TDR4 215 aa8.36□□□□□ -1.07
CMTM1-210ENST00000528441 CHTF18Q8WVB6 975 aa8.36□□□□□ -1.07
CMTM1-210ENST00000528441 ITLN2Q8WWU7 325 aaPredicted RBP8.36□□□□□ -1.07
CMTM1-210ENST00000528441 RND1Q92730 232 aa8.36□□□□□ -1.07
CMTM1-210ENST00000528441 TP53INP1Q96A56 240 aa8.36□□□□□ -1.07
CMTM1-210ENST00000528441 OMA1Q96E52 524 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms