RNA–Protein interactions for RNA: ENST00000527954.1

EXOSC4-203, Transcript of exosome component 4, humanhuman

TSL 2

Gene EXOSC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-203ENST00000527954 CHN1P15882 459 aa13.9□□□□□ -0.18
EXOSC4-203ENST00000527954 KRT15P19012 456 aa13.9□□□□□ -0.18
EXOSC4-203ENST00000527954 CSNK2A2P19784 350 aaPredicted RBP13.9□□□□□ -0.18
EXOSC4-203ENST00000527954 CASP3P42574 277 aa13.9□□□□□ -0.18
EXOSC4-203ENST00000527954 MASP1P48740 699 aa13.9□□□□□ -0.18
EXOSC4-203ENST00000527954 ALDH9A1P49189 494 aa13.9□□□□□ -0.18
EXOSC4-203ENST00000527954 MAP4K2Q12851 820 aa13.9□□□□□ -0.18
EXOSC4-203ENST00000527954 DUSP8Q13202 625 aa13.9□□□□□ -0.18
EXOSC4-203ENST00000527954 DESI1Q6ICB0 168 aa13.9□□□□□ -0.18
EXOSC4-203ENST00000527954 ULK2Q8IYT8 1036 aa13.9□□□□□ -0.18
EXOSC4-203ENST00000527954 KLHL29Q96CT2 875 aa13.9□□□□□ -0.18
EXOSC4-203ENST00000527954 MTBPQ96DY7 904 aa13.9□□□□□ -0.18
EXOSC4-203ENST00000527954 GNRHR2Q96P88 292 aa13.9□□□□□ -0.18
EXOSC4-203ENST00000527954 TMEM237Q96Q45 408 aa13.9□□□□□ -0.18
EXOSC4-203ENST00000527954 SECISBP2Q96T21 854 aaKnown RBP13.9□□□□□ -0.18
EXOSC4-203ENST00000527954 ITPAQ9BY32 194 aa13.9□□□□□ -0.18
EXOSC4-203ENST00000527954 MAT2BQ9NZL9 334 aa13.9□□□□□ -0.18
EXOSC4-203ENST00000527954 VPS29Q9UBQ0 182 aa13.9□□□□□ -0.18
EXOSC4-203ENST00000527954 GOLGA8RI6L899 631 aa13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 GNB5O14775 395 aa13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 SNX4O95219 450 aa13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 ESRRBO95718 433 aa13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 KRT6AP02538 564 aa13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 KRT6BP04259 564 aa13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 ATP1B1P05026 303 aa13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 ABCB1P08183 1280 aaPredicted RBP13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 IMPDH1P20839 514 aa13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 ABCD3P28288 659 aa13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 SOX18P35713 384 aa13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 KRT6CP48668 564 aa13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 TRA2BP62995 288 aaKnown RBP13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 RPP38P78345 283 aaKnown RBP13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 RASA2Q15283 850 aa13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 LTB4RQ15722 352 aa13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 TRMT12Q53H54 448 aaKnown RBP13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 RIPPLY2Q5TAB7 128 aa13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 FNDC7Q5VTL7 733 aa13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 TRMT10CQ7L0Y3 403 aaKnown RBP13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 CDH24Q86UP0 819 aa13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 PACS2Q86VP3 889 aa13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 IFT20Q8IY31 132 aa13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 CLYBLQ8N0X4 340 aa13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 C17orf47Q8NEP4 570 aa13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 METTL6Q8TCB7 284 aa13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 CNRIP1Q96F85 164 aaPredicted RBP13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 FAIM2Q9BWQ8 316 aa13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 HEY2Q9UBP5 337 aa13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 ZNF639Q9UID6 485 aa13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 PSME2Q9UL46 239 aa13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 SLC6A5Q9Y345 797 aa13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 ZNF780BQ9Y6R6 833 aa13.89□□□□□ -0.19
EXOSC4-203ENST00000527954 KDM4EB2RXH2 506 aaPredicted RBP13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 FAM47E-STBD1D6RA91 191 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 ULK1O75385 1050 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 PPM1BO75688 479 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 CBX7O95931 251 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 HPNP05981 417 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 FAM153BP0C7A2 387 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 ATP5F1P24539 256 aaPredicted RBP13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 HMOX2P30519 316 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 HTR6P50406 440 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 CDK9P50750 372 aaKnown RBP13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 DLX5P56178 289 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 WNT3P56703 355 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 CRYZQ08257 329 aaKnown RBP13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 CSTF3Q12996 717 aaKnown RBP13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 TOMM20Q15388 145 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 FAM153CQ494X1 144 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 GPRIN3Q6ZVF9 776 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 SEM1Q6ZVN7 128 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 WDR53Q7Z5U6 358 aaPredicted RBP13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 CEP112Q8N8E3 955 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 OR52R1Q8NGF1 315 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 LCORQ96JN0 433 aaPredicted RBP13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 ZNF681Q96N22 645 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 ZNF382Q96SR6 550 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 TIMP4Q99727 224 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 ZNF559Q9BR84 538 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 UBQLN3Q9H347 655 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 METTL7AQ9H8H3 244 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 PFDN4Q9NQP4 134 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 MCM8Q9UJA3 840 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 UTS2RQ9UKP6 389 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 CFL2Q9Y281 166 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 DLGAP4Q9Y2H0 992 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 C15orf41Q9Y2V0 281 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 PLLPQ9Y342 182 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 PCDHGB3Q9Y5G1 929 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 PHF3Q92576 2039 aaKnown RBP13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 NCKAP5O14513 1909 aa13.88□□□□□ -0.19
EXOSC4-203ENST00000527954 C2orf72A6NCS6 295 aa13.87□□□□□ -0.19
EXOSC4-203ENST00000527954 KIF2AO00139 706 aaPredicted RBP13.87□□□□□ -0.19
EXOSC4-203ENST00000527954 IL3P08700 152 aa13.87□□□□□ -0.19
EXOSC4-203ENST00000527954 RHOXF2BP0C7M4 288 aa13.87□□□□□ -0.19
EXOSC4-203ENST00000527954 HSD3B1P14060 373 aa13.87□□□□□ -0.19
EXOSC4-203ENST00000527954 PCSK2P16519 638 aa13.87□□□□□ -0.19
EXOSC4-203ENST00000527954 NAGAP17050 411 aa13.87□□□□□ -0.19
EXOSC4-203ENST00000527954 HSD3B2P26439 372 aa13.87□□□□□ -0.19
EXOSC4-203ENST00000527954 RAE1P78406 368 aaKnown RBP13.87□□□□□ -0.19
EXOSC4-203ENST00000527954 MRPS35P82673 323 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms