RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 TRPC4Q9UBN4 977 aa11□□□□□ -0.65
LINC01001-201ENST00000526704 PLEKHB1Q9UF11 243 aaPredicted RBP11□□□□□ -0.65
LINC01001-201ENST00000526704 KLHL20Q9Y2M5 609 aa11□□□□□ -0.65
LINC01001-201ENST00000526704 A0A0A6YYD5 115 aa11□□□□□ -0.65
LINC01001-201ENST00000526704 EDDM13A0A1B0GTR0 161 aa11□□□□□ -0.65
LINC01001-201ENST00000526704 WASHC1A8K0Z3 465 aa11□□□□□ -0.65
LINC01001-201ENST00000526704 SLC9A3R1O14745 358 aaPredicted RBP11□□□□□ -0.65
LINC01001-201ENST00000526704 KIAA0355O15063 1070 aa11□□□□□ -0.65
LINC01001-201ENST00000526704 LRRTM2O43300 516 aa11□□□□□ -0.65
LINC01001-201ENST00000526704 IDH3BO43837 385 aa11□□□□□ -0.65
LINC01001-201ENST00000526704 PRKRAO75569 313 aaKnown RBP11□□□□□ -0.65
LINC01001-201ENST00000526704 LGI1O95970 557 aa11□□□□□ -0.65
LINC01001-201ENST00000526704 CHRM4P08173 479 aa11□□□□□ -0.65
LINC01001-201ENST00000526704 GIPRP48546 466 aa11□□□□□ -0.65
LINC01001-201ENST00000526704 BNC1Q01954 994 aa11□□□□□ -0.65
LINC01001-201ENST00000526704 COX10Q12887 443 aa11□□□□□ -0.65
LINC01001-201ENST00000526704 TAB1Q15750 504 aa11□□□□□ -0.65
LINC01001-201ENST00000526704 C3orf38Q5JPI3 329 aa11□□□□□ -0.65
LINC01001-201ENST00000526704 ENTPD8Q5MY95 495 aa11□□□□□ -0.65
LINC01001-201ENST00000526704 C1orf94Q6P1W5 598 aa11□□□□□ -0.65
LINC01001-201ENST00000526704 WASH2PQ6VEQ5 465 aa11□□□□□ -0.65
LINC01001-201ENST00000526704 MEX3DQ86XN8 651 aaKnown RBP11□□□□□ -0.65
LINC01001-201ENST00000526704 RAB43Q86YS6 212 aa11□□□□□ -0.65
LINC01001-201ENST00000526704 CREB3L4Q8TEY5 395 aa11□□□□□ -0.65
LINC01001-201ENST00000526704 TMEM203Q969S6 136 aa11□□□□□ -0.65
LINC01001-201ENST00000526704 PRRC1Q96M27 445 aa11□□□□□ -0.65
LINC01001-201ENST00000526704 DPH7Q9BTV6 452 aa11□□□□□ -0.65
LINC01001-201ENST00000526704 OR2B2Q9GZK3 357 aa11□□□□□ -0.65
LINC01001-201ENST00000526704 MCOLN1Q9GZU1 580 aa11□□□□□ -0.65
LINC01001-201ENST00000526704 ADAM29Q9UKF5 820 aa11□□□□□ -0.65
LINC01001-201ENST00000526704 SLC27A6Q9Y2P4 619 aa11□□□□□ -0.65
LINC01001-201ENST00000526704 IRAK3Q9Y616 596 aa11□□□□□ -0.65
LINC01001-201ENST00000526704 SPIN1Q9Y657 262 aaPredicted RBP11□□□□□ -0.65
LINC01001-201ENST00000526704 HOXC11O43248 304 aaPredicted RBP10.99□□□□□ -0.65
LINC01001-201ENST00000526704 OR1F1O43749 312 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 LCMT2O60294 686 aaKnown RBP10.99□□□□□ -0.65
LINC01001-201ENST00000526704 APOL3O95236 402 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 CHRM5P08912 532 aaPredicted RBP10.99□□□□□ -0.65
LINC01001-201ENST00000526704 CLTBP09497 229 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 CCL5P13501 91 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 PPP2R1BP30154 601 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 MAN2A2P49641 1150 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 KHKP50053 298 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 WNT4P56705 351 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 ARPC4P59998 168 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 RPS25P62851 125 aaKnown RBP10.99□□□□□ -0.65
LINC01001-201ENST00000526704 GPR19Q15760 415 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 UAP1L1Q3KQV9 507 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 ZNF793Q6ZN11 406 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 GRASPQ7Z6J2 395 aaPredicted RBP10.99□□□□□ -0.65
LINC01001-201ENST00000526704 SFTPA1Q8IWL2 248 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 CLDN22Q8N7P3 220 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 LINC01555Q8NAE3 123 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 BBS10Q8TAM1 723 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 TM9SF4Q92544 642 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 RSPRY1Q96DX4 576 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 EGLN3Q9H6Z9 239 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 NT5DC2Q9H857 520 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 DDX31Q9H8H2 851 aaKnown RBP10.99□□□□□ -0.65
LINC01001-201ENST00000526704 CTPS2Q9NRF8 586 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 ZCCHC3Q9NUD5 404 aaKnown RBP10.99□□□□□ -0.65
LINC01001-201ENST00000526704 TAS2R7Q9NYW3 318 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 SLC9A8Q9Y2E8 581 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 LINC00854A0A1B0GVQ3 168 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 A8MV72 311 aaPredicted RBP10.99□□□□□ -0.65
LINC01001-201ENST00000526704 STK25O00506 426 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 CSF3P09919 207 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 ACADMP11310 421 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 GPC1P35052 558 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 DDOSTP39656 456 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 SLC6A11P48066 632 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 ASAH1Q13510 395 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 NDUFAF5Q5TEU4 345 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 OR2G6Q5TZ20 316 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 OR4C11Q6IEV9 310 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 FAM131AQ6UXB0 335 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 ADAMTSL4Q6UY14 1074 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 LRRTM4Q86VH4 590 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 GATAD2AQ86YP4 633 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 ETFBKMTQ8IXQ9 262 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 C17orf62Q9BQA9 187 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 LGR4Q9BXB1 951 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 MMP28Q9H239 520 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 SF3B6Q9Y3B4 125 aaKnown RBP10.99□□□□□ -0.65
LINC01001-201ENST00000526704 CHD7Q9P2D1 2997 aa10.99□□□□□ -0.65
LINC01001-201ENST00000526704 C5orf42Q9H799 3197 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 IGKV1-8A0A0C4DH67 115 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 A0A1W2PQL4 384 aaPredicted RBP10.98□□□□□ -0.65
LINC01001-201ENST00000526704 MEIOCA2RUB1 952 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 C4orf51C9J302 202 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 ACP2P11117 423 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 SDC2P34741 201 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 NCBP2P52298 156 aaKnown RBP eCLIP10.98□□□□□ -0.65
LINC01001-201ENST00000526704 CSNK1G2P78368 415 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 SLAMF1Q13291 335 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 ELAVL3Q14576 367 aaKnown RBP10.98□□□□□ -0.65
LINC01001-201ENST00000526704 SNAPC1Q16533 368 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 C1orf53Q5VUE5 145 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 FAM46CQ5VWP2 391 aa10.98□□□□□ -0.65
LINC01001-201ENST00000526704 METRNLQ641Q3 311 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms