RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.08□□□□□ -0.32
LRRK1-202ENST00000525284 SLC31A2O15432 143 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 MED6O75586 246 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 B3GALNT1O75752 331 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 SOX30O94993 753 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 OR9K2Q8NGE7 335 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 MAPK15Q8TD08 544 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 TMEM234Q8WY98 164 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 ZNF514Q96K75 400 aaPredicted RBP13.08□□□□□ -0.32
LRRK1-202ENST00000525284 CNN2Q99439 309 aaKnown RBP13.08□□□□□ -0.32
LRRK1-202ENST00000525284 HEBP1Q9NRV9 189 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 KLHL42Q9P2K6 505 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 RHBDD3Q9Y3P4 386 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 A0A1W2PP18 115 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 FAM227AF5H4B4 570 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 LYRM1O43325 122 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 KLRC4O43908 158 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 UGT2B7P16662 529 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 TAS2R30P59541 319 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 ZNF572Q7Z3I7 529 aaPredicted RBP13.08□□□□□ -0.32
LRRK1-202ENST00000525284 LINC01599Q8WXQ3 324 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 GLIS2Q9BZE0 524 aaPredicted RBP13.08□□□□□ -0.32
LRRK1-202ENST00000525284 RNF32Q9H0A6 362 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 KCNMB3Q9NPA1 279 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 MEPEQ9NQ76 525 aaPredicted RBP13.08□□□□□ -0.32
LRRK1-202ENST00000525284 ITGB2P05107 769 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 IL32P24001 234 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 SOX9P48436 509 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 MGAT3Q09327 533 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 SLAMF1Q13291 335 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 CHRNA6Q15825 494 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 SFRP5Q5T4F7 317 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 RNF128Q8TEB7 428 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 BCAS2O75934 225 aaPredicted RBP13.08□□□□□ -0.32
LRRK1-202ENST00000525284 CSTAP01040 98 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 PFKLP17858 780 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 HNRNPDQ14103 355 aaKnown RBP13.08□□□□□ -0.32
LRRK1-202ENST00000525284 GRIK5Q16478 980 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 NNATQ16517 81 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 MYLK3Q32MK0 819 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 SHFQ7M4L6 423 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 OR1E3Q8WZA6 343 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 UHRF1Q96T88 793 aaPredicted RBP13.08□□□□□ -0.32
LRRK1-202ENST00000525284 NMNAT2Q9BZQ4 307 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 GIMAP2Q9UG22 337 aa13.08□□□□□ -0.32
LRRK1-202ENST00000525284 SPATA31C1P0DKV0 1188 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 ATP1B2P14415 290 aaPredicted RBP13.07□□□□□ -0.32
LRRK1-202ENST00000525284 LAG3P18627 525 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 GCGRP47871 477 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 SMYD5Q6GMV2 418 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 SUSD1Q6UWL2 747 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 C3P1Q6ZMU1 363 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 MMAAQ8IVH4 418 aaKnown RBP13.07□□□□□ -0.32
LRRK1-202ENST00000525284 FNDC9Q8TBE3 224 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 TSPEARQ8WU66 669 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 IKZF4Q9H2S9 585 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 DERAQ9Y315 318 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 CEBPZOSA8MTT3 80 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 TYRP1P17643 537 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 AOC1P19801 751 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 METTL11BQ5VVY1 283 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 STEAP4Q687X5 459 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 NOXA1Q86UR1 476 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 LRRTM4Q86VH4 590 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 CCDC116Q8IYX3 515 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 NLGN4YQ8NFZ3 816 aaPredicted RBP13.07□□□□□ -0.32
LRRK1-202ENST00000525284 TRUB1Q8WWH5 349 aaKnown RBP13.07□□□□□ -0.32
LRRK1-202ENST00000525284 TMEM14AQ9Y6G1 99 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 DIP2BQ9P265 1576 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 SHPRHQ149N8 1683 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 TSPAN6O43657 245 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 PRAMEF2O60811 474 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 CLCNKBP51801 687 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 C6orf141Q5SZD1 244 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 RAET1LQ5VY80 246 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 CES4AQ5XG92 561 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 PLPPR4Q7Z2D5 763 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 PLD4Q96BZ4 506 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 KCNH6Q9H252 994 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 KCNIP2Q9NS61 270 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 DLGAP4Q9Y2H0 992 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 CASZ1Q86V15 1759 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 SMIM28A0A1B0GU29 152 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 TRAPPC13A5PLN9 417 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 EFCAB7A8K855 629 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 FAAHO00519 579 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 DDNO94850 711 aaPredicted RBP13.07□□□□□ -0.32
LRRK1-202ENST00000525284 PTGIRP43119 386 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 PNCKQ6P2M8 343 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 MOB1BQ7L9L4 216 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 TECPR1Q7Z6L1 1165 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 HAS1Q92839 578 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 SDHAF2Q9NX18 166 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 SLC2A8Q9NY64 477 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 OR6C2Q9NZP2 312 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 SLC6A5Q9Y345 797 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 CEMIPQ8WUJ3 1361 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 LOC102724200A0A096LPH7 203 aaPredicted RBP13.07□□□□□ -0.32
LRRK1-202ENST00000525284 SERPINA5P05154 406 aa13.07□□□□□ -0.32
LRRK1-202ENST00000525284 MEF2AQ02078 507 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 272.1 ms