RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 TMA16Q96EY4 203 aaKnown RBP1.4□□□□□ -2.19
CD44-212ENST00000524922 MMABQ96EY8 250 aaPredicted RBP1.4□□□□□ -2.19
CD44-212ENST00000524922 PERPQ96FX8 193 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 HPDLQ96IR7 371 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 HSFY1Q96LI6 401 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 UBXN10Q96LJ8 280 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 SMC6Q96SB8 1091 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 HERPUD2Q9BSE4 406 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 DUSP16Q9BY84 665 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 GSDMCQ9BYG8 508 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 SLC17A9Q9BYT1 436 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 NLNQ9BYT8 704 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 XPO4Q9C0E2 1151 aaKnown RBP1.4□□□□□ -2.19
CD44-212ENST00000524922 ING2Q9H160 280 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 RWDD1Q9H446 243 aaPredicted RBP1.4□□□□□ -2.19
CD44-212ENST00000524922 MRM3Q9HC36 420 aaKnown RBP1.4□□□□□ -2.19
CD44-212ENST00000524922 LHX9Q9NQ69 397 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 WASH6PQ9NQA3 447 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 DYRK4Q9NR20 520 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 ABCC13Q9NSE7 274 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 ABCB8Q9NUT2 735 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 TAB2Q9NYJ8 693 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 RRN3Q9NYV6 651 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 RBAKQ9NYW8 714 aaPredicted RBP1.4□□□□□ -2.19
CD44-212ENST00000524922 ARMCX1Q9P291 453 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 UBA2Q9UBT2 640 aaPredicted RBP1.4□□□□□ -2.19
CD44-212ENST00000524922 DNPEPQ9ULA0 475 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 KIAA1257Q9ULG3 409 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 PADI2Q9Y2J8 665 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 ZNF835Q9Y2P0 537 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 KIF3AQ9Y496 699 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 OR51B4Q9Y5P0 310 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 FADS3Q9Y5Q0 445 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 EPPK1P58107 5090 aaKnown RBP1.4□□□□□ -2.19
CD44-212ENST00000524922 RYR2Q92736 4967 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 AKAP6Q13023 2319 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 RTTNQ86VV8 2226 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 HERC2O95714 4834 aa1.4□□□□□ -2.19
CD44-212ENST00000524922 INTS1Q8N201 2190 aaKnown RBP1.4□□□□□ -2.19
CD44-212ENST00000524922 TENM1Q9UKZ4 2725 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 CACNA1CQ13936 2221 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 IGLV3-10A0A075B6K4 115 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 GIMAP1-GIMAP5A0A087WTJ2 511 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 IGHV1OR21-1A0A087WYE8 117 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 IGLV9-49A0A0B4J1Y8 123 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 TRAV17A0A0B4J275 112 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 LOC101059948A0A1B0GTJ6 334 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 SYNDIG1LA6NDD5 238 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 MSGN1A6NI15 193 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 ZNF233A6NK53 670 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 LRRC53A6NM62 1247 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 CCDC169A6NNP5 214 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 A8MXQ7 604 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 CPLX1O14810 134 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 XPO1O14980 1071 aaKnown RBP1.39□□□□□ -2.19
CD44-212ENST00000524922 SLC16A4O15374 487 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 ACSL4O60488 711 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 CTAG2O75638 210 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 TMEM63AO94886 807 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 IL1BP01584 269 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 TNNC2P02585 160 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 POLBP06746 335 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 CCNB1P14635 433 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 IL4RP24394 825 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 DNASE1P24855 282 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 CNTFP26441 200 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 ABCD3P28288 659 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 CD1CP29017 333 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 CHRNA3P32297 505 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 GTF2H1P32780 548 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 ETV5P41161 510 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 HALP42357 657 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 CAPZBP47756 277 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 CSNK1DP48730 415 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 F2RL1P55085 397 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 CDH4P55283 916 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 CLDN6P56747 220 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 SRP54P61011 504 aaKnown RBP1.39□□□□□ -2.19
CD44-212ENST00000524922 RPS15P62841 145 aaKnown RBP1.39□□□□□ -2.19
CD44-212ENST00000524922 TNNC1P63316 161 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 CCL7P80098 99 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 PPP2R2BQ00005 443 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 CEBPZQ03701 1054 aaKnown RBP1.39□□□□□ -2.19
CD44-212ENST00000524922 CNTN1Q12860 1018 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 AIMP2Q13155 320 aaKnown RBP1.39□□□□□ -2.19
CD44-212ENST00000524922 RIGQ13278 110 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 SGCGQ13326 291 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 MFAP5Q13361 173 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 PSMD6Q15008 389 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 UGP2Q16851 508 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 PNLIPRP3Q17RR3 467 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 SGSM1Q2NKQ1 1148 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 DEFB133Q30KQ1 61 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 DEFB109BQ30KR1 87 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 NADK2Q4G0N4 442 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 TMEM52BQ4KMG9 183 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 RILPL1Q5EBL4 403 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 BMP2KLQ5H9B9 411 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 MDH1BQ5I0G3 518 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 MS4A13Q5J8X5 152 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms