RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 STT3AP46977 705 aa12.39□□□□□ -0.43
PCDHGB1-201ENST00000523390 TCTE1Q5JU00 501 aa12.39□□□□□ -0.43
PCDHGB1-201ENST00000523390 SERPINA11Q86U17 422 aa12.39□□□□□ -0.43
PCDHGB1-201ENST00000523390 METTL4Q8N3J2 472 aa12.39□□□□□ -0.43
PCDHGB1-201ENST00000523390 HLA-CQ95604 372 aa12.39□□□□□ -0.43
PCDHGB1-201ENST00000523390 TMIGD2Q96BF3 282 aa12.39□□□□□ -0.43
PCDHGB1-201ENST00000523390 ADAD1Q96M93 576 aaKnown RBP12.39□□□□□ -0.43
PCDHGB1-201ENST00000523390 MND1Q9BWT6 205 aa12.39□□□□□ -0.43
PCDHGB1-201ENST00000523390 ALOXE3Q9BYJ1 711 aa12.39□□□□□ -0.43
PCDHGB1-201ENST00000523390 DEFB126Q9BYW3 111 aa12.39□□□□□ -0.43
PCDHGB1-201ENST00000523390 TCF7L1Q9HCS4 588 aa12.39□□□□□ -0.43
PCDHGB1-201ENST00000523390 TNFRSF12AQ9NP84 129 aa12.39□□□□□ -0.43
PCDHGB1-201ENST00000523390 TRNAU1APQ9NX07 287 aaKnown RBP12.39□□□□□ -0.43
PCDHGB1-201ENST00000523390 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 GFRA2O00451 464 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 SSNA1O43805 119 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 FZD6O60353 706 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 MCCD1P59942 119 aaPredicted RBP12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 TDGQ13569 410 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 PTCRAQ6ISU1 281 aaPredicted RBP12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 ZSWIM9Q86XI8 627 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 PLPP6Q8IY26 295 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 PLEKHA1Q9HB21 404 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 KCMF1Q9P0J7 381 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 RARRES3Q9UL19 164 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 HEMK1Q9Y5R4 338 aaPredicted RBP12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 A0A075B6Q4 140 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 NPIPA5A0A0B4J1W7 369 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 FABP12A6NFH5 140 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 ZNF726A6NNF4 738 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 NPIPA7E9PJI5 369 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 LINC01565O15544 149 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 KLHL18O94889 574 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 NPIPA8P0DM63 369 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 HLCSP50747 726 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 CRYZQ08257 329 aaKnown RBP12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 SGCBQ16585 318 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 TMEM236Q5W0B7 351 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 ADNP2Q6IQ32 1131 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 MCATQ8IVS2 390 aaKnown RBP12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 LNX2Q8N448 690 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 ERMAPQ96PL5 475 aaPredicted RBP12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 ZNF300Q96RE9 604 aaPredicted RBP12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 TRPV5Q9NQA5 729 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 AGPAT4Q9NRZ5 378 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 CNOT11Q9UKZ1 510 aaKnown RBP12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 CACNA1CQ13936 2221 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 SAGE2PA6NJ88 616 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 ANXA2P2A6NMY6 339 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 H0Y8X5 98 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 SLC1A7O00341 560 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 ANXA2P07355 339 aaKnown RBP12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 CDKN2CP42773 168 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 CSNK1EP49674 416 aaKnown RBP12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 DUSP3P51452 185 aaPredicted RBP12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 OR8J1Q8NGP2 316 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 PDXPQ96GD0 296 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 RIMS3Q9UJD0 308 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 HCN2Q9UL51 889 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 NAALAD2Q9Y3Q0 740 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 A0A0G2JPF8 293 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 HNRNPCL3B7ZW38 293 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 PEX12O00623 359 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 HNRNPCL4P0DMR1 293 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 NPPBP16860 134 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 CELP19835 753 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 RORCP51449 518 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 MAZP56270 477 aaKnown RBP12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 VLDLRP98155 873 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 HOXC5Q00444 222 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 ODF4Q2M2E3 257 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 TRIM46Q7Z4K8 759 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 LHFPL3Q86UP9 236 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 PELI3Q8N2H9 469 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 OR2T33Q8NG76 320 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 PELOQ9BRX2 385 aaKnown RBP12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 ASPNQ9BXN1 380 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 TAS2R7Q9NYW3 318 aa12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 RBMX2Q9Y388 322 aaKnown RBP12.38□□□□□ -0.43
PCDHGB1-201ENST00000523390 PLD2O14939 933 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 EDNRAP25101 427 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 CNR2P34972 360 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 SCN1BQ07699 218 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 UGT8Q16880 541 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 ALG1LQ6GMV1 187 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 SHISA6Q6ZSJ9 500 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 NRMQ8IXM6 262 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 IQCF1Q8N6M8 205 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 CHST4Q8NCG5 386 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 OR2L8Q8NGY9 312 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 CREB3L4Q8TEY5 395 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 ISOC1Q96CN7 298 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 LRR1Q96L50 414 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 ZNF583Q96ND8 569 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 MS4A4EQ96PG1 132 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 SLC5A10A0PJK1 596 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 BOLA2-SMG1P6H3BVE0 249 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 TRAPPC6AO75865 159 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 CDRT1O95170 752 aa12.37□□□□□ -0.43
PCDHGB1-201ENST00000523390 SBK3P0C264 359 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms