RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 GABRR3A8MPY1 467 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.3□□□□□ -1.72
SKP1-211ENST00000523359 RRP8O43159 456 aaKnown RBP4.3□□□□□ -1.72
SKP1-211ENST00000523359 ARHGEF9O43307 516 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 ECE2O60344 883 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 CSO75390 466 aaKnown RBP4.3□□□□□ -1.72
SKP1-211ENST00000523359 TGM6O95932 706 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 C9P02748 559 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 MMP10P09238 476 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 GCFC2P16383 781 aaKnown RBP4.3□□□□□ -1.72
SKP1-211ENST00000523359 HTR2AP28223 471 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 AKT2P31751 481 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 DUTP33316 252 aaKnown RBP4.3□□□□□ -1.72
SKP1-211ENST00000523359 ARHGDIBP52566 201 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 MTTPP55157 894 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 NUCB2P80303 420 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 ENPP2Q13822 863 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 PDIA5Q14554 519 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 STXBP2Q15833 593 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 ZNF74Q16587 644 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 ADAMTSL4-AS1Q5T5F5 129 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 PIP5KL1Q5T9C9 394 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 PRSS55Q6UWB4 352 aaPredicted RBP4.3□□□□□ -1.72
SKP1-211ENST00000523359 GSG1LQ6UXU4 331 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 BZW1Q7L1Q6 419 aaKnown RBP4.3□□□□□ -1.72
SKP1-211ENST00000523359 PTAR1Q7Z6K3 402 aaPredicted RBP4.3□□□□□ -1.72
SKP1-211ENST00000523359 LUZP1Q86V48 1076 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 HOGA1Q86XE5 327 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 CROCCP3Q8IVE0 287 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 CENPLQ8N0S6 344 aaPredicted RBP4.3□□□□□ -1.72
SKP1-211ENST00000523359 PYROXD2Q8N2H3 581 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 RAB42Q8N4Z0 105 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 COMMD1Q8N668 190 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 OR10G8Q8NGN5 311 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 OR6S1Q8NH40 331 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 SLC2A14Q8TDB8 520 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 MRGPRDQ8TDS7 321 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 C12orf66Q96MD2 445 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 BTBD9Q96Q07 612 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 CDCA3Q99618 268 aaPredicted RBP4.3□□□□□ -1.72
SKP1-211ENST00000523359 LPAR4Q99677 370 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 RBM4Q9BWF3 364 aaKnown RBP4.3□□□□□ -1.72
SKP1-211ENST00000523359 NMNAT2Q9BZQ4 307 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 DDX47Q9H0S4 455 aaKnown RBP4.3□□□□□ -1.72
SKP1-211ENST00000523359 AUNIPQ9H7T9 357 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 SYNDIG1Q9H7V2 258 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 UCK1Q9HA47 277 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 CACNG5Q9UF02 275 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 GPR132Q9UNW8 380 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 MGAT4BQ9UQ53 548 aa4.3□□□□□ -1.72
SKP1-211ENST00000523359 A0A087WUV0 522 aaPredicted RBP4.29□□□□□ -1.72
SKP1-211ENST00000523359 A0A0J9YYE9 177 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 MEIOCA2RUB1 952 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 KBTBD13C9JR72 458 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 SLCO1B7G3V0H7 640 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 NR5A2O00482 541 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 AKR7A2O43488 359 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 STBD1O95210 358 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 TRBC1P01850 177 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 PABPC4LP0CB38 370 aaKnown RBP4.29□□□□□ -1.72
SKP1-211ENST00000523359 ZCCHC18P0CG32 403 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 OR8G3PP0DMU2 310 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 RPA2P15927 270 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 ZNF26P17031 533 aaPredicted RBP4.29□□□□□ -1.72
SKP1-211ENST00000523359 PRKACAP17612 351 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 CEBPBP17676 345 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 CYP2B6P20813 491 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 SSTR1P30872 391 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 ATP5C1P36542 298 aaKnown RBP4.29□□□□□ -1.72
SKP1-211ENST00000523359 ALDH3B1P43353 468 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 ATP12AP54707 1039 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 BASP1P80723 227 aaKnown RBP4.29□□□□□ -1.72
SKP1-211ENST00000523359 CSTF1Q05048 431 aaKnown RBP4.29□□□□□ -1.72
SKP1-211ENST00000523359 IL10RBQ08334 325 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 BCL2A1Q16548 175 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 PCK2Q16822 640 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 FAM83EQ2M2I3 478 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 FAM46CQ5VWP2 391 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 ATL3Q6DD88 541 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 OR4C11Q6IEV9 310 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 PMF1Q6P1K2 205 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 KDM7AQ6ZMT4 941 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 GPR142Q7Z601 462 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 YRDCQ86U90 279 aaKnown RBP4.29□□□□□ -1.72
SKP1-211ENST00000523359 CCDC60Q8IWA6 550 aaPredicted RBP4.29□□□□□ -1.72
SKP1-211ENST00000523359 KLHDC8AQ8IYD2 350 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 BCORP1Q8N888 145 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 ZNF248Q8NDW4 579 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 SMAP2Q8WU79 429 aaPredicted RBP4.29□□□□□ -1.72
SKP1-211ENST00000523359 NPY6RQ99463 290 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 C11orf70Q9BRQ4 267 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 FAM213AQ9BRX8 229 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 BARHL1Q9BZE3 327 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 FAM192AQ9GZU8 254 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 COG4Q9H9E3 785 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 FGF22Q9HCT0 170 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 PLCXD1Q9NUJ7 323 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.29□□□□□ -1.72
SKP1-211ENST00000523359 VPS54Q9P1Q0 977 aa4.29□□□□□ -1.72
SKP1-211ENST00000523359 TMEM181Q9P2C4 612 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms