RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 TM9SF2Q99805 663 aa20.69■□□□□ 0.9
PVT1-218ENST00000523328 G6PC3Q9BUM1 346 aa20.69■□□□□ 0.9
PVT1-218ENST00000523328 WDR41Q9HAD4 459 aa20.69■□□□□ 0.9
PVT1-218ENST00000523328 DTX4Q9Y2E6 619 aa20.69■□□□□ 0.9
PVT1-218ENST00000523328 PCDHGA11Q9Y5H2 935 aa20.69■□□□□ 0.9
PVT1-218ENST00000523328 HIVEP2P31629 2446 aa20.69■□□□□ 0.9
PVT1-218ENST00000523328 H7C1Q1 480 aa20.68■□□□□ 0.9
PVT1-218ENST00000523328 KERAO60938 352 aa20.68■□□□□ 0.9
PVT1-218ENST00000523328 CDH16O75309 829 aa20.68■□□□□ 0.9
PVT1-218ENST00000523328 GP5P40197 560 aa20.68■□□□□ 0.9
PVT1-218ENST00000523328 PTGDSP41222 190 aa20.68■□□□□ 0.9
PVT1-218ENST00000523328 CUL3Q13618 768 aa20.68■□□□□ 0.9
PVT1-218ENST00000523328 LIPJQ5W064 366 aa20.68■□□□□ 0.9
PVT1-218ENST00000523328 DESI1Q6ICB0 168 aa20.68■□□□□ 0.9
PVT1-218ENST00000523328 OR52E8Q6IFG1 317 aa20.68■□□□□ 0.9
PVT1-218ENST00000523328 ANGPTL8Q6UXH0 198 aa20.68■□□□□ 0.9
PVT1-218ENST00000523328 MYLK4Q86YV6 388 aaPredicted RBP20.68■□□□□ 0.9
PVT1-218ENST00000523328 P3H2Q8IVL5 708 aa20.68■□□□□ 0.9
PVT1-218ENST00000523328 TEX9Q8N6V9 391 aa20.68■□□□□ 0.9
PVT1-218ENST00000523328 CDKL2Q92772 493 aa20.68■□□□□ 0.9
PVT1-218ENST00000523328 INTS12Q96CB8 462 aaKnown RBP20.68■□□□□ 0.9
PVT1-218ENST00000523328 NXF5Q9H1B4 397 aaKnown RBP20.68■□□□□ 0.9
PVT1-218ENST00000523328 TXNDC16Q9P2K2 825 aa20.68■□□□□ 0.9
PVT1-218ENST00000523328 CLCF1Q9UBD9 225 aa20.68■□□□□ 0.9
PVT1-218ENST00000523328 TESMINQ9Y4I5 508 aa20.68■□□□□ 0.9
PVT1-218ENST00000523328 DSCAMO60469 2012 aa20.67■□□□□ 0.9
PVT1-218ENST00000523328 H0YIV9 168 aa20.67■□□□□ 0.9
PVT1-218ENST00000523328 CASKO14936 926 aa20.67■□□□□ 0.9
PVT1-218ENST00000523328 SNPHO15079 494 aa20.67■□□□□ 0.9
PVT1-218ENST00000523328 SIAH2O43255 324 aa20.67■□□□□ 0.9
PVT1-218ENST00000523328 MTHFD2P13995 350 aa20.67■□□□□ 0.9
PVT1-218ENST00000523328 S1PR1P21453 382 aa20.67■□□□□ 0.9
PVT1-218ENST00000523328 GPX3P22352 226 aa20.67■□□□□ 0.9
PVT1-218ENST00000523328 GCNT2Q8N0V5 402 aa20.67■□□□□ 0.9
PVT1-218ENST00000523328 WNT2BQ93097 391 aa20.67■□□□□ 0.9
PVT1-218ENST00000523328 HGDQ93099 445 aa20.67■□□□□ 0.9
PVT1-218ENST00000523328 METTL7AQ9H8H3 244 aa20.67■□□□□ 0.9
PVT1-218ENST00000523328 EIF3LQ9Y262 564 aaKnown RBP20.67■□□□□ 0.9
PVT1-218ENST00000523328 TCRBV9S1A1TA0A576 114 aa20.66■□□□□ 0.9
PVT1-218ENST00000523328 FAM159BA6NKW6 160 aa20.66■□□□□ 0.9
PVT1-218ENST00000523328 A8MXE2 369 aa20.66■□□□□ 0.9
PVT1-218ENST00000523328 H0Y3Z8 333 aa20.66■□□□□ 0.9
PVT1-218ENST00000523328 SMPD2O60906 423 aa20.66■□□□□ 0.9
PVT1-218ENST00000523328 PPM1BO75688 479 aa20.66■□□□□ 0.9
PVT1-218ENST00000523328 GBAP04062 536 aa20.66■□□□□ 0.9
PVT1-218ENST00000523328 NAGAP17050 411 aa20.66■□□□□ 0.9
PVT1-218ENST00000523328 TCP1P17987 556 aaKnown RBP20.66■□□□□ 0.9
PVT1-218ENST00000523328 PIK3R1P27986 724 aa20.66■□□□□ 0.9
PVT1-218ENST00000523328 PCSK6P29122 969 aa20.66■□□□□ 0.9
PVT1-218ENST00000523328 CMC1Q7Z7K0 106 aa20.66■□□□□ 0.9
PVT1-218ENST00000523328 NUDT13Q86X67 352 aa20.66■□□□□ 0.9
PVT1-218ENST00000523328 PYROXD1Q8WU10 500 aa20.66■□□□□ 0.9
PVT1-218ENST00000523328 Q96MF0 132 aa20.66■□□□□ 0.9
PVT1-218ENST00000523328 NODALQ96S42 347 aa20.66■□□□□ 0.9
PVT1-218ENST00000523328 OR2B2Q9GZK3 357 aa20.66■□□□□ 0.9
PVT1-218ENST00000523328 PIGMQ9H3S5 423 aa20.66■□□□□ 0.9
PVT1-218ENST00000523328 ACTR8Q9H981 624 aa20.66■□□□□ 0.9
PVT1-218ENST00000523328 NMRAL1Q9HBL8 299 aa20.66■□□□□ 0.9
PVT1-218ENST00000523328 GALNT9Q9HCQ5 603 aa20.66■□□□□ 0.9
PVT1-218ENST00000523328 C6orf203Q9P0P8 240 aaPredicted RBP20.66■□□□□ 0.9
PVT1-218ENST00000523328 NDRG3Q9UGV2 375 aa20.66■□□□□ 0.9
PVT1-218ENST00000523328 RAI1Q7Z5J4 1906 aaPredicted RBP20.66■□□□□ 0.9
PVT1-218ENST00000523328 HEATR5AQ86XA9 2040 aa20.66■□□□□ 0.9
PVT1-218ENST00000523328 C2orf72A6NCS6 295 aa20.65■□□□□ 0.9
PVT1-218ENST00000523328 EFCAB8A8MWE9 144 aa20.65■□□□□ 0.9
PVT1-218ENST00000523328 ICOSLGO75144 302 aa20.65■□□□□ 0.9
PVT1-218ENST00000523328 RHOXF2BP0C7M4 288 aa20.65■□□□□ 0.9
PVT1-218ENST00000523328 KRT15P19012 456 aa20.65■□□□□ 0.9
PVT1-218ENST00000523328 PHEXP78562 749 aa20.65■□□□□ 0.9
PVT1-218ENST00000523328 SRYQ05066 204 aa20.65■□□□□ 0.9
PVT1-218ENST00000523328 SLC30A6Q6NXT4 461 aa20.65■□□□□ 0.9
PVT1-218ENST00000523328 ENPP6Q6UWR7 440 aa20.65■□□□□ 0.9
PVT1-218ENST00000523328 PRSS57Q6UWY2 283 aa20.65■□□□□ 0.9
PVT1-218ENST00000523328 CYS1Q717R9 158 aa20.65■□□□□ 0.9
PVT1-218ENST00000523328 TRIM42Q8IWZ5 723 aa20.65■□□□□ 0.9
PVT1-218ENST00000523328 OR7G1Q8NGA0 311 aa20.65■□□□□ 0.9
PVT1-218ENST00000523328 WDR20Q8TBZ3 569 aa20.65■□□□□ 0.9
PVT1-218ENST00000523328 PIGTQ969N2 578 aa20.65■□□□□ 0.9
PVT1-218ENST00000523328 CTHRC1Q96CG8 243 aa20.65■□□□□ 0.9
PVT1-218ENST00000523328 OSBPL11Q9BXB4 747 aa20.65■□□□□ 0.9
PVT1-218ENST00000523328 ACBD3Q9H3P7 528 aa20.65■□□□□ 0.9
PVT1-218ENST00000523328 SERHLQ9NQF3 203 aa20.65■□□□□ 0.9
PVT1-218ENST00000523328 PSD3Q9NYI0 1048 aa20.65■□□□□ 0.9
PVT1-218ENST00000523328 EXO1Q9UQ84 846 aaKnown RBP20.65■□□□□ 0.9
PVT1-218ENST00000523328 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.64■□□□□ 0.89
PVT1-218ENST00000523328 DEFB108AA8MXU0 73 aa20.64■□□□□ 0.89
PVT1-218ENST00000523328 CTIFO43310 598 aaKnown RBP20.64■□□□□ 0.89
PVT1-218ENST00000523328 UGDHO60701 494 aa20.64■□□□□ 0.89
PVT1-218ENST00000523328 TNFSF13O75888 250 aa20.64■□□□□ 0.89
PVT1-218ENST00000523328 LTA4HP09960 611 aaKnown RBP20.64■□□□□ 0.89
PVT1-218ENST00000523328 GCKP35557 465 aa20.64■□□□□ 0.89
PVT1-218ENST00000523328 NEK2P51955 445 aa20.64■□□□□ 0.89
PVT1-218ENST00000523328 GFRA1P56159 465 aa20.64■□□□□ 0.89
PVT1-218ENST00000523328 NNATQ16517 81 aa20.64■□□□□ 0.89
PVT1-218ENST00000523328 CPSF6Q16630 551 aaKnown RBP eCLIP20.64■□□□□ 0.89
PVT1-218ENST00000523328 NUP54Q7Z3B4 507 aa20.64■□□□□ 0.89
PVT1-218ENST00000523328 WDSUB1Q8N9V3 476 aa20.64■□□□□ 0.89
PVT1-218ENST00000523328 OR4K14Q8NGD5 310 aa20.64■□□□□ 0.89
PVT1-218ENST00000523328 REPS1Q96D71 796 aa20.64■□□□□ 0.89
PVT1-218ENST00000523328 PACSIN3Q9UKS6 424 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms