RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 SLC26A5P58743 744 aa23.9■■□□□ 1.42
NKX2-1-204ENST00000522719 MXRA7P84157 204 aa23.9■■□□□ 1.42
NKX2-1-204ENST00000522719 GTDC1Q4AE62 458 aa23.9■■□□□ 1.42
NKX2-1-204ENST00000522719 RUNDC3AQ59EK9 446 aa23.9■■□□□ 1.42
NKX2-1-204ENST00000522719 SAXO2Q658L1 398 aa23.9■■□□□ 1.42
NKX2-1-204ENST00000522719 MSRB3Q8IXL7 192 aa23.9■■□□□ 1.42
NKX2-1-204ENST00000522719 NUP43Q8NFH3 380 aa23.9■■□□□ 1.42
NKX2-1-204ENST00000522719 OR5AK3PQ8NH89 298 aa23.9■■□□□ 1.42
NKX2-1-204ENST00000522719 DOK4Q8TEW6 326 aa23.9■■□□□ 1.42
NKX2-1-204ENST00000522719 NEURL3Q96EH8 262 aa23.9■■□□□ 1.42
NKX2-1-204ENST00000522719 ANKRD27Q96NW4 1050 aa23.9■■□□□ 1.42
NKX2-1-204ENST00000522719 CCNL2Q96S94 520 aaPredicted RBP23.9■■□□□ 1.42
NKX2-1-204ENST00000522719 SEMA4CQ9C0C4 833 aa23.9■■□□□ 1.42
NKX2-1-204ENST00000522719 OR10A5Q9H207 317 aa23.9■■□□□ 1.42
NKX2-1-204ENST00000522719 C1orf21Q9H246 121 aa23.9■■□□□ 1.42
NKX2-1-204ENST00000522719 TPT1P8Q9HAU6 139 aa23.9■■□□□ 1.42
NKX2-1-204ENST00000522719 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.9■■□□□ 1.42
NKX2-1-204ENST00000522719 CFL2Q9Y281 166 aa23.9■■□□□ 1.42
NKX2-1-204ENST00000522719 SSUH2Q9Y2M2 353 aa23.9■■□□□ 1.42
NKX2-1-204ENST00000522719 APC2O95996 2303 aa23.89■■□□□ 1.41
NKX2-1-204ENST00000522719 MED19A0JLT2 244 aaPredicted RBP23.89■■□□□ 1.41
NKX2-1-204ENST00000522719 ZNF891A8MT65 544 aaPredicted RBP23.89■■□□□ 1.41
NKX2-1-204ENST00000522719 ICAM2P13598 275 aa23.89■■□□□ 1.41
NKX2-1-204ENST00000522719 SSTR4P31391 388 aa23.89■■□□□ 1.41
NKX2-1-204ENST00000522719 VAC14Q08AM6 782 aa23.89■■□□□ 1.41
NKX2-1-204ENST00000522719 TP53BP2Q13625 1128 aa23.89■■□□□ 1.41
NKX2-1-204ENST00000522719 EXOSC7Q15024 291 aaKnown RBP23.89■■□□□ 1.41
NKX2-1-204ENST00000522719 SZRD1Q7Z422 152 aa23.89■■□□□ 1.41
NKX2-1-204ENST00000522719 C6orf120Q7Z4R8 191 aa23.89■■□□□ 1.41
NKX2-1-204ENST00000522719 OR52R1Q8NGF1 315 aa23.89■■□□□ 1.41
NKX2-1-204ENST00000522719 VMP1Q96GC9 406 aa23.89■■□□□ 1.41
NKX2-1-204ENST00000522719 MS4A4EQ96PG1 132 aa23.89■■□□□ 1.41
NKX2-1-204ENST00000522719 SH3GL1Q99961 368 aa23.89■■□□□ 1.41
NKX2-1-204ENST00000522719 EPS8L2Q9H6S3 715 aa23.89■■□□□ 1.41
NKX2-1-204ENST00000522719 BCAP29Q9UHQ4 241 aa23.89■■□□□ 1.41
NKX2-1-204ENST00000522719 CORO2BQ9UQ03 480 aa23.89■■□□□ 1.41
NKX2-1-204ENST00000522719 C15orf38-AP3S2A0A0A6YYH1 394 aa23.88■■□□□ 1.41
NKX2-1-204ENST00000522719 CLIC1O00299 241 aa23.88■■□□□ 1.41
NKX2-1-204ENST00000522719 EIF2S3P41091 472 aaKnown RBP23.88■■□□□ 1.41
NKX2-1-204ENST00000522719 RASSF2P50749 326 aa23.88■■□□□ 1.41
NKX2-1-204ENST00000522719 SLC37A1P57057 533 aa23.88■■□□□ 1.41
NKX2-1-204ENST00000522719 SRSF6Q13247 344 aaKnown RBP23.88■■□□□ 1.41
NKX2-1-204ENST00000522719 PLAG1Q6DJT9 500 aa23.88■■□□□ 1.41
NKX2-1-204ENST00000522719 NANOGP8Q6NSW7 305 aa23.88■■□□□ 1.41
NKX2-1-204ENST00000522719 C8orf82Q6P1X6 216 aaPredicted RBP23.88■■□□□ 1.41
NKX2-1-204ENST00000522719 C16orf89Q6UX73 402 aa23.88■■□□□ 1.41
NKX2-1-204ENST00000522719 RNF111Q6ZNA4 994 aa23.88■■□□□ 1.41
NKX2-1-204ENST00000522719 ARPINQ7Z6K5 226 aa23.88■■□□□ 1.41
NKX2-1-204ENST00000522719 ZNF615Q8N8J6 731 aa23.88■■□□□ 1.41
NKX2-1-204ENST00000522719 APCDD1LQ8NCL9 501 aa23.88■■□□□ 1.41
NKX2-1-204ENST00000522719 OR8J3Q8NGG0 315 aa23.88■■□□□ 1.41
NKX2-1-204ENST00000522719 M1APQ8TC57 530 aa23.88■■□□□ 1.41
NKX2-1-204ENST00000522719 THAP4Q8WY91 577 aa23.88■■□□□ 1.41
NKX2-1-204ENST00000522719 NCLNQ969V3 563 aa23.88■■□□□ 1.41
NKX2-1-204ENST00000522719 GPATCH1Q9BRR8 931 aaKnown RBP23.88■■□□□ 1.41
NKX2-1-204ENST00000522719 RAD21L1Q9H4I0 556 aa23.88■■□□□ 1.41
NKX2-1-204ENST00000522719 ANKRA2Q9H9E1 313 aa23.88■■□□□ 1.41
NKX2-1-204ENST00000522719 NANOGQ9H9S0 305 aa23.88■■□□□ 1.41
NKX2-1-204ENST00000522719 PRODH2Q9UF12 536 aa23.88■■□□□ 1.41
NKX2-1-204ENST00000522719 FBXL4Q9UKA2 621 aa23.88■■□□□ 1.41
NKX2-1-204ENST00000522719 GIMAP1-GIMAP5A0A087WTJ2 511 aa23.87■■□□□ 1.41
NKX2-1-204ENST00000522719 OR6C76A6NM76 312 aa23.87■■□□□ 1.41
NKX2-1-204ENST00000522719 EVPLLA8MZ36 301 aa23.87■■□□□ 1.41
NKX2-1-204ENST00000522719 CLPSP04118 112 aa23.87■■□□□ 1.41
NKX2-1-204ENST00000522719 MAGEA8P43361 318 aa23.87■■□□□ 1.41
NKX2-1-204ENST00000522719 PRKAG1P54619 331 aa23.87■■□□□ 1.41
NKX2-1-204ENST00000522719 TXNL4AP83876 142 aaKnown RBP23.87■■□□□ 1.41
NKX2-1-204ENST00000522719 CAPRIN1Q14444 709 aaKnown RBP23.87■■□□□ 1.41
NKX2-1-204ENST00000522719 ZCCHC12Q6PEW1 402 aa23.87■■□□□ 1.41
NKX2-1-204ENST00000522719 PGAM4Q8N0Y7 254 aa23.87■■□□□ 1.41
NKX2-1-204ENST00000522719 CLEC4FQ8N1N0 589 aa23.87■■□□□ 1.41
NKX2-1-204ENST00000522719 GIMAP5Q96F15 307 aa23.87■■□□□ 1.41
NKX2-1-204ENST00000522719 AURKBQ96GD4 344 aaPredicted RBP23.87■■□□□ 1.41
NKX2-1-204ENST00000522719 NUDT9Q9BW91 350 aa23.87■■□□□ 1.41
NKX2-1-204ENST00000522719 GPATCH2Q9NW75 528 aa23.87■■□□□ 1.41
NKX2-1-204ENST00000522719 CDC14CA4D256 554 aa23.86■■□□□ 1.41
NKX2-1-204ENST00000522719 RRP8O43159 456 aaKnown RBP23.86■■□□□ 1.41
NKX2-1-204ENST00000522719 CPOXP36551 454 aa23.86■■□□□ 1.41
NKX2-1-204ENST00000522719 EMDP50402 254 aa23.86■■□□□ 1.41
NKX2-1-204ENST00000522719 CLCN2P51788 898 aa23.86■■□□□ 1.41
NKX2-1-204ENST00000522719 AP2B1P63010 937 aa23.86■■□□□ 1.41
NKX2-1-204ENST00000522719 DUSP8Q13202 625 aa23.86■■□□□ 1.41
NKX2-1-204ENST00000522719 ATP1A4Q13733 1029 aa23.86■■□□□ 1.41
NKX2-1-204ENST00000522719 BTBD16Q32M84 506 aa23.86■■□□□ 1.41
NKX2-1-204ENST00000522719 RBM15BQ8NDT2 890 aaKnown RBP23.86■■□□□ 1.41
NKX2-1-204ENST00000522719 SIMC1Q8NDZ2 872 aa23.86■■□□□ 1.41
NKX2-1-204ENST00000522719 OR8K3Q8NH51 312 aa23.86■■□□□ 1.41
NKX2-1-204ENST00000522719 FBXO27Q8NI29 283 aa23.86■■□□□ 1.41
NKX2-1-204ENST00000522719 CPPED1Q9BRF8 314 aaPredicted RBP23.86■■□□□ 1.41
NKX2-1-204ENST00000522719 SLC39A3Q9BRY0 314 aa23.86■■□□□ 1.41
NKX2-1-204ENST00000522719 ZNF160Q9HCG1 818 aa23.86■■□□□ 1.41
NKX2-1-204ENST00000522719 MMP25Q9NPA2 562 aa23.86■■□□□ 1.41
NKX2-1-204ENST00000522719 NCOR2Q9Y618 2525 aa23.86■■□□□ 1.41
NKX2-1-204ENST00000522719 URB1O60287 2271 aaKnown RBP23.86■■□□□ 1.41
NKX2-1-204ENST00000522719 PCSK5Q92824 1860 aa23.86■■□□□ 1.41
NKX2-1-204ENST00000522719 TTC36A6NLP5 189 aa23.85■■□□□ 1.41
NKX2-1-204ENST00000522719 HMGN2P05204 90 aaKnown RBP23.85■■□□□ 1.41
NKX2-1-204ENST00000522719 SLC6A2P23975 617 aa23.85■■□□□ 1.41
NKX2-1-204ENST00000522719 PRIM2P49643 509 aa23.85■■□□□ 1.41
NKX2-1-204ENST00000522719 PSME3P61289 254 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms