RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 ATP9AO75110 1047 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 RPLP0P05388 317 aaKnown RBP3.04□□□□□ -1.92
HDAC2-208ENST00000520746 DCNP07585 359 aaKnown RBP3.04□□□□□ -1.92
HDAC2-208ENST00000520746 AOC1P19801 751 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 ITIH1P19827 911 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 CTNNA2P26232 953 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 GIFP27352 417 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 TMOD1P28289 359 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 IRX6P78412 446 aaPredicted RBP3.04□□□□□ -1.92
HDAC2-208ENST00000520746 NFATC2Q13469 925 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 NFE2L1Q14494 772 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 MEP1BQ16820 701 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 ARMCX4Q5H9R4 360 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 PM20D1Q6GTS8 502 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 CASC1Q6TDU7 716 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 ZNF589Q86UQ0 364 aaPredicted RBP3.04□□□□□ -1.92
HDAC2-208ENST00000520746 SLC22A15Q8IZD6 547 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 TEX26Q8N6G2 289 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 SMYD1Q8NB12 490 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 Q8NBF4 154 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 VN1R2Q8NFZ6 395 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 CKAP2Q8WWK9 683 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 PRICKLE1Q96MT3 831 aaPredicted RBP3.04□□□□□ -1.92
HDAC2-208ENST00000520746 HNRNPABQ99729 332 aaKnown RBP3.04□□□□□ -1.92
HDAC2-208ENST00000520746 PRMT1Q99873 361 aaKnown RBP3.04□□□□□ -1.92
HDAC2-208ENST00000520746 C17orf62Q9BQA9 187 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 LRRC61Q9BV99 259 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 TMEM117Q9H0C3 514 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 SRD5A3Q9H8P0 318 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 RGS18Q9NS28 235 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 TMEM161AQ9NX61 479 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 NDE1Q9NXR1 346 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 SLCO1C1Q9NYB5 712 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 NLGN3Q9NZ94 848 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 PAK5Q9P286 719 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 MAD2L2Q9UI95 211 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 GBF1Q92538 1859 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 TRIOO75962 3097 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 FOCADQ5VW36 1801 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 CDH23Q9H251 3354 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 MUC3AQ02505 3323 aa3.04□□□□□ -1.92
HDAC2-208ENST00000520746 IGSF9BQ9UPX0 1349 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.03□□□□□ -1.92
HDAC2-208ENST00000520746 ANKDD1BA6NHY2 528 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 NKX6-3A6NJ46 265 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 SDR42E2A6NKP2 422 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 ZNF732B4DXR9 585 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 K7EQD1 137 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 SOCS3O14543 225 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 TFECO14948 347 aaPredicted RBP3.03□□□□□ -1.92
HDAC2-208ENST00000520746 SLC7A4O43246 635 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 TLX2O43763 284 aaPredicted RBP3.03□□□□□ -1.92
HDAC2-208ENST00000520746 SCO2O43819 266 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 NME6O75414 186 aaPredicted RBP3.03□□□□□ -1.92
HDAC2-208ENST00000520746 RAD51DO75771 328 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 TGDSO95455 350 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 CALM1P0DP23 149 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 CALM2P0DP24 149 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 CALM3P0DP25 149 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 C4BPBP20851 252 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 SLC1A3P43003 542 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 IER3P46695 156 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 CRYBB1P53674 252 aaPredicted RBP3.03□□□□□ -1.92
HDAC2-208ENST00000520746 NLRP11P59045 1033 aaKnown RBP3.03□□□□□ -1.92
HDAC2-208ENST00000520746 RPP38P78345 283 aaKnown RBP3.03□□□□□ -1.92
HDAC2-208ENST00000520746 AKAP17AQ02040 695 aaKnown RBP3.03□□□□□ -1.92
HDAC2-208ENST00000520746 CSTF1Q05048 431 aaKnown RBP3.03□□□□□ -1.92
HDAC2-208ENST00000520746 MGAT3Q09327 533 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 ZNF177Q13360 481 aaPredicted RBP3.03□□□□□ -1.92
HDAC2-208ENST00000520746 GIT2Q14161 759 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 UBE2SQ16763 222 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 SPANXN4Q5MJ08 99 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 MARCH8Q5T0T0 291 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 TWF2Q6IBS0 349 aaKnown RBP3.03□□□□□ -1.92
HDAC2-208ENST00000520746 TCEAL6Q6IPX3 200 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 SLC27A4Q6P1M0 643 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 C11orf88Q6PI97 169 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 TMEM184AQ6ZMB5 413 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 GDPGP1Q6ZNW5 385 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 C17orf107Q6ZR85 190 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 ECHDC2Q86YB7 292 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 SYCP3Q8IZU3 236 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 LRRC43Q8N309 656 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 AMER3Q8N944 861 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 OR52B6Q8NGF0 335 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 GDAP1Q8TB36 358 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 URGCPQ8TCY9 931 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 PCDHB18PQ96TA0 734 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 UBXN6Q9BZV1 441 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 CUEDC2Q9H467 287 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 CWH43Q9H720 699 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 TMEM206Q9H813 350 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 ZNF302Q9NR11 478 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 MRPL17Q9NRX2 175 aaKnown RBP3.03□□□□□ -1.92
HDAC2-208ENST00000520746 NRBP2Q9NSY0 501 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 FBXL5Q9UKA1 691 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 GPR132Q9UNW8 380 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 MCM3APO60318 1980 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 ZNF318Q5VUA4 2279 aa3.03□□□□□ -1.92
HDAC2-208ENST00000520746 CFAP54Q96N23 3096 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms