RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 CLN6Q9NWW5 311 aa24.22■■□□□ 1.47
COL13A1-213ENST00000520267 LYARQ9NX58 379 aaKnown RBP24.22■■□□□ 1.47
COL13A1-213ENST00000520267 SPTBN5Q9NRC6 3674 aaKnown RBP24.22■■□□□ 1.47
COL13A1-213ENST00000520267 TLR4O00206 839 aa24.22■■□□□ 1.47
COL13A1-213ENST00000520267 NME6O75414 186 aaPredicted RBP24.22■■□□□ 1.47
COL13A1-213ENST00000520267 LGI1O95970 557 aa24.22■■□□□ 1.47
COL13A1-213ENST00000520267 HNRNPA2B1P22626 353 aaKnown RBP24.22■■□□□ 1.47
COL13A1-213ENST00000520267 ADCK1Q86TW2 530 aa24.22■■□□□ 1.47
COL13A1-213ENST00000520267 NRROSQ86YC3 692 aa24.22■■□□□ 1.47
COL13A1-213ENST00000520267 NUP43Q8NFH3 380 aa24.22■■□□□ 1.47
COL13A1-213ENST00000520267 IL4I1Q96RQ9 567 aa24.22■■□□□ 1.47
COL13A1-213ENST00000520267 SPATA5L1Q9BVQ7 753 aa24.22■■□□□ 1.47
COL13A1-213ENST00000520267 ARMC7Q9H6L4 198 aa24.22■■□□□ 1.47
COL13A1-213ENST00000520267 GIMAP4Q9NUV9 329 aa24.22■■□□□ 1.47
COL13A1-213ENST00000520267 CLDND1Q9NY35 253 aa24.22■■□□□ 1.47
COL13A1-213ENST00000520267 COL4A2P08572 1712 aa24.22■■□□□ 1.47
COL13A1-213ENST00000520267 SH3D21A4FU49 640 aa24.21■■□□□ 1.47
COL13A1-213ENST00000520267 A6NCN8 305 aa24.21■■□□□ 1.47
COL13A1-213ENST00000520267 GADD45AP24522 165 aa24.21■■□□□ 1.47
COL13A1-213ENST00000520267 BUD31P41223 144 aaPredicted RBP24.21■■□□□ 1.47
COL13A1-213ENST00000520267 PRR5P85299 388 aa24.21■■□□□ 1.47
COL13A1-213ENST00000520267 TGM3Q08188 693 aa24.21■■□□□ 1.47
COL13A1-213ENST00000520267 TARDBPQ13148 414 aaKnown RBP eCLIP24.21■■□□□ 1.47
COL13A1-213ENST00000520267 BTLAQ7Z6A9 289 aa24.21■■□□□ 1.47
COL13A1-213ENST00000520267 TRIM69Q86WT6 500 aa24.21■■□□□ 1.47
COL13A1-213ENST00000520267 TMCO5AQ8N6Q1 288 aa24.21■■□□□ 1.47
COL13A1-213ENST00000520267 KAT2AQ92830 837 aa24.21■■□□□ 1.47
COL13A1-213ENST00000520267 POLR2J3Q9H1A7 115 aaKnown RBP24.21■■□□□ 1.47
COL13A1-213ENST00000520267 AKIP1Q9NQ31 210 aa24.21■■□□□ 1.47
COL13A1-213ENST00000520267 A0A0G2JPF8 293 aa24.21■■□□□ 1.47
COL13A1-213ENST00000520267 HNRNPCL2B2RXH8 293 aa24.21■■□□□ 1.47
COL13A1-213ENST00000520267 HNRNPCL3B7ZW38 293 aa24.21■■□□□ 1.47
COL13A1-213ENST00000520267 CLDN25C9JDP6 229 aa24.21■■□□□ 1.47
COL13A1-213ENST00000520267 HNRNPCL4P0DMR1 293 aa24.21■■□□□ 1.47
COL13A1-213ENST00000520267 MAGP20916 626 aa24.21■■□□□ 1.47
COL13A1-213ENST00000520267 TPMTP51580 245 aa24.21■■□□□ 1.47
COL13A1-213ENST00000520267 COL9A2Q14055 689 aaPredicted RBP24.21■■□□□ 1.47
COL13A1-213ENST00000520267 SLX4IPQ5VYV7 408 aa24.21■■□□□ 1.47
COL13A1-213ENST00000520267 FAM92BQ6ZTR7 304 aa24.21■■□□□ 1.47
COL13A1-213ENST00000520267 SLC46A3Q7Z3Q1 461 aa24.21■■□□□ 1.47
COL13A1-213ENST00000520267 NT5CQ8TCD5 201 aa24.21■■□□□ 1.47
COL13A1-213ENST00000520267 OR2A14Q96R47 310 aa24.21■■□□□ 1.47
COL13A1-213ENST00000520267 FNDC11Q9BVV2 318 aa24.21■■□□□ 1.47
COL13A1-213ENST00000520267 MAN2C1Q9NTJ4 1040 aa24.21■■□□□ 1.47
COL13A1-213ENST00000520267 SLC9A8Q9Y2E8 581 aa24.21■■□□□ 1.47
COL13A1-213ENST00000520267 ZNF780BQ9Y6R6 833 aa24.21■■□□□ 1.47
COL13A1-213ENST00000520267 A0A1W2PRQ8 180 aa24.2■■□□□ 1.46
COL13A1-213ENST00000520267 H3BN98 237 aa24.2■■□□□ 1.46
COL13A1-213ENST00000520267 AIREO43918 545 aa24.2■■□□□ 1.46
COL13A1-213ENST00000520267 TP53P04637 393 aaPredicted RBP24.2■■□□□ 1.46
COL13A1-213ENST00000520267 NR2F6P10588 404 aa24.2■■□□□ 1.46
COL13A1-213ENST00000520267 MAN2A2P49641 1150 aa24.2■■□□□ 1.46
COL13A1-213ENST00000520267 XKP51811 444 aa24.2■■□□□ 1.46
COL13A1-213ENST00000520267 LSM11P83369 360 aaKnown RBP eCLIP24.2■■□□□ 1.46
COL13A1-213ENST00000520267 RGS1Q08116 209 aa24.2■■□□□ 1.46
COL13A1-213ENST00000520267 ZNF846Q147U1 533 aa24.2■■□□□ 1.46
COL13A1-213ENST00000520267 WDR53Q7Z5U6 358 aaPredicted RBP24.2■■□□□ 1.46
COL13A1-213ENST00000520267 RPLP0P6Q8NHW5 317 aa24.2■■□□□ 1.46
COL13A1-213ENST00000520267 C10orf90Q96M02 699 aa24.2■■□□□ 1.46
COL13A1-213ENST00000520267 C6orf106Q9H6K1 298 aaPredicted RBP24.2■■□□□ 1.46
COL13A1-213ENST00000520267 CTPS2Q9NRF8 586 aa24.2■■□□□ 1.46
COL13A1-213ENST00000520267 ARHGEF17Q96PE2 2063 aaPredicted RBP24.2■■□□□ 1.46
COL13A1-213ENST00000520267 EFCAB10A6NFE3 127 aa24.19■■□□□ 1.46
COL13A1-213ENST00000520267 DRD1P21728 446 aa24.19■■□□□ 1.46
COL13A1-213ENST00000520267 GRK5P34947 590 aa24.19■■□□□ 1.46
COL13A1-213ENST00000520267 MRPS21P82921 87 aaKnown RBP24.19■■□□□ 1.46
COL13A1-213ENST00000520267 GNA13Q14344 377 aa24.19■■□□□ 1.46
COL13A1-213ENST00000520267 ALG11Q2TAA5 492 aa24.19■■□□□ 1.46
COL13A1-213ENST00000520267 SLC22A18Q96BI1 424 aa24.19■■□□□ 1.46
COL13A1-213ENST00000520267 ZHX1-C8orf76Q96EF9 292 aa24.19■■□□□ 1.46
COL13A1-213ENST00000520267 C3orf14Q9HBI5 128 aa24.19■■□□□ 1.46
COL13A1-213ENST00000520267 OSGIN1Q9UJX0 560 aa24.19■■□□□ 1.46
COL13A1-213ENST00000520267 CTSVO60911 334 aa24.19■■□□□ 1.46
COL13A1-213ENST00000520267 ENTPD6O75354 484 aa24.19■■□□□ 1.46
COL13A1-213ENST00000520267 CLK1P49759 484 aaKnown RBP24.19■■□□□ 1.46
COL13A1-213ENST00000520267 SRP54P61011 504 aaKnown RBP24.19■■□□□ 1.46
COL13A1-213ENST00000520267 ITGADQ13349 1161 aa24.19■■□□□ 1.46
COL13A1-213ENST00000520267 C12orf73Q69YU5 71 aa24.19■■□□□ 1.46
COL13A1-213ENST00000520267 SLIRPQ9GZT3 109 aaKnown RBP24.19■■□□□ 1.46
COL13A1-213ENST00000520267 ZBTB20Q9HC78 741 aaPredicted RBP24.19■■□□□ 1.46
COL13A1-213ENST00000520267 CNOT2Q9NZN8 540 aaKnown RBP24.19■■□□□ 1.46
COL13A1-213ENST00000520267 NDOR1Q9UHB4 597 aa24.19■■□□□ 1.46
COL13A1-213ENST00000520267 P2RX6O15547 441 aa24.18■■□□□ 1.46
COL13A1-213ENST00000520267 SLITRK5O94991 958 aa24.18■■□□□ 1.46
COL13A1-213ENST00000520267 UGT2B7P16662 529 aa24.18■■□□□ 1.46
COL13A1-213ENST00000520267 SLC15A1P46059 708 aa24.18■■□□□ 1.46
COL13A1-213ENST00000520267 SERPINB10P48595 397 aa24.18■■□□□ 1.46
COL13A1-213ENST00000520267 KIR2DS3Q14952 304 aa24.18■■□□□ 1.46
COL13A1-213ENST00000520267 ZCCHC10Q8TBK6 192 aa24.18■■□□□ 1.46
COL13A1-213ENST00000520267 KLHL6Q8WZ60 621 aa24.18■■□□□ 1.46
COL13A1-213ENST00000520267 ZG16BQ96DA0 208 aa24.18■■□□□ 1.46
COL13A1-213ENST00000520267 TM4SF19Q96DZ7 209 aa24.18■■□□□ 1.46
COL13A1-213ENST00000520267 OR2A5Q96R48 311 aa24.18■■□□□ 1.46
COL13A1-213ENST00000520267 PINK1Q9BXM7 581 aa24.18■■□□□ 1.46
COL13A1-213ENST00000520267 KLHL25Q9H0H3 589 aa24.18■■□□□ 1.46
COL13A1-213ENST00000520267 SLC38A1Q9H2H9 487 aa24.18■■□□□ 1.46
COL13A1-213ENST00000520267 SLC25A19Q9HC21 320 aa24.18■■□□□ 1.46
COL13A1-213ENST00000520267 FAIMQ9NVQ4 179 aa24.18■■□□□ 1.46
COL13A1-213ENST00000520267 DNAAF2Q9NVR5 837 aaKnown RBP24.18■■□□□ 1.46
COL13A1-213ENST00000520267 GIMAP1-GIMAP5A0A087WTJ2 511 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms