RNA–Protein interactions for RNA: ENST00000515514.1

CDK18-223, Transcript of cyclin dependent kinase 18, human

TSL 4

Gene CDK18, Length 541 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-223	ENST00000515514	S1PR1	P21453	382 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	DEK	P35659	375 aa	Known RBP	11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	CASP3	P42574	277 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	TRPC1	P48995	793 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	CDK9	P50750	372 aa	Known RBP	11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	TRA2B	P62995	288 aa	Known RBP	11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	MAP4K2	Q12851	820 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	CSTF3	Q12996	717 aa	Known RBP	11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	DUSP8	Q13202	625 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	RASA2	Q15283	850 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	HSPB2	Q16082	182 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	PRICKLE4	Q2TBC4	344 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	SGO1	Q5FBB7	561 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	NHSL2	Q5HYW2	709 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	LGSN	Q5TDP6	509 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	FNDC7	Q5VTL7	733 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	CES4A	Q5XG92	561 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	BICRAL	Q6AI39	1079 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	RPS27L	Q71UM5	84 aa	Known RBP	11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	WDR53	Q7Z5U6	358 aa	Predicted RBP	11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	PACS2	Q86VP3	889 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	LIX1L	Q8IVB5	337 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	CTAGE4	Q8IX94	777 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	CNPY4	Q8N129	248 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	TMEM151A	Q8N4L1	468 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	IFT81	Q8WYA0	676 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	KLHL29	Q96CT2	875 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	NTNG2	Q96CW9	530 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	HSPBAP1	Q96EW2	488 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	ZNF382	Q96SR6	550 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	ITPA	Q9BY32	194 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	PRDM14	Q9GZV8	571 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	NXF5	Q9H1B4	397 aa	Known RBP	11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	ALKBH4	Q9NXW9	302 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	ZNF639	Q9UID6	485 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	PSME2	Q9UL46	239 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	DTX4	Q9Y2E6	619 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	STK38L	Q9Y2H1	464 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	NCKAP5	O14513	1909 aa		11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	ANKHD1	Q8IWZ3	2542 aa	Known RBP	11.29	□□□□□ -0.6
CDK18-223	ENST00000515514	HIVEP1	P15822	2718 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	AHRR	A9YTQ3	701 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	DVL2	O14641	736 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	ERAL1	O75616	437 aa	Known RBP	11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	PPM1B	O75688	479 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	ZWINT	O95229	277 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	KRT6A	P02538	564 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	KRT6B	P04259	564 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	ABCB1	P08183	1280 aa	Predicted RBP	11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	RHOXF2B	P0C7M4	288 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	TAC1	P20366	129 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	TIMP3	P35625	211 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	KRT6C	P48668	564 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	ASCL1	P50553	236 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	CDH13	P55290	713 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	DLX5	P56178	289 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	RIPPLY3	P57055	190 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	CLC	Q05315	142 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	PLCXD2	Q0VAA5	305 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	SF3B4	Q15427	424 aa	Known RBP eCLIP	11.28	□□□□□ -0.6	4e-6	■■■■□ 20.7
CDK18-223	ENST00000515514	NNAT	Q16517	81 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	TIFAB	Q6ZNK6	161 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	SEM1	Q6ZVN7	128 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	PRR22	Q8IZ63	422 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	MMP21	Q8N119	569 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	C1orf52	Q8N6N3	182 aa	Known RBP	11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	RELL2	Q8NC24	303 aa	Predicted RBP	11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	ZNF675	Q8TD23	568 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	CTHRC1	Q96CG8	243 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	TMEM237	Q96Q45	408 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	HBEGF	Q99075	208 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	OSBPL11	Q9BXB4	747 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	SHCBP1L	Q9BZQ2	653 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	BRINP2	Q9C0B6	783 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	METTL7A	Q9H8H3	244 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	VPS29	Q9UBQ0	182 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	PRODH2	Q9UF12	536 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	MCM8	Q9UJA3	840 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	ZNF225	Q9UK10	706 aa		11.28	□□□□□ -0.6
CDK18-223	ENST00000515514	FRG2C	A6NGY1	282 aa		11.27	□□□□□ -0.61
CDK18-223	ENST00000515514	MANBA	O00462	879 aa		11.27	□□□□□ -0.61
CDK18-223	ENST00000515514	PPP6C	O00743	305 aa		11.27	□□□□□ -0.61
CDK18-223	ENST00000515514	SNPH	O15079	494 aa		11.27	□□□□□ -0.61
CDK18-223	ENST00000515514	TRAPPC6A	O75865	159 aa		11.27	□□□□□ -0.61
CDK18-223	ENST00000515514	OR4F21	O95013	312 aa		11.27	□□□□□ -0.61
CDK18-223	ENST00000515514	EPPIN	O95925	133 aa		11.27	□□□□□ -0.61
CDK18-223	ENST00000515514	CBX7	O95931	251 aa		11.27	□□□□□ -0.61
CDK18-223	ENST00000515514	CD1E	P15812	388 aa		11.27	□□□□□ -0.61
CDK18-223	ENST00000515514	TSPAN8	P19075	237 aa		11.27	□□□□□ -0.61
CDK18-223	ENST00000515514	PTPN6	P29350	595 aa		11.27	□□□□□ -0.61
CDK18-223	ENST00000515514	CEACAM8	P31997	349 aa	Predicted RBP	11.27	□□□□□ -0.61
CDK18-223	ENST00000515514	HSD17B3	P37058	310 aa		11.27	□□□□□ -0.61
CDK18-223	ENST00000515514	FEN1	P39748	380 aa	Known RBP	11.27	□□□□□ -0.61
CDK18-223	ENST00000515514	DCAF7	P61962	342 aa		11.27	□□□□□ -0.61
CDK18-223	ENST00000515514	PSPH	P78330	225 aa		11.27	□□□□□ -0.61
CDK18-223	ENST00000515514	MGAT2	Q10469	447 aa		11.27	□□□□□ -0.61
CDK18-223	ENST00000515514	SNTA1	Q13424	505 aa		11.27	□□□□□ -0.61
CDK18-223	ENST00000515514	EXOSC7	Q15024	291 aa	Known RBP	11.27	□□□□□ -0.61
CDK18-223	ENST00000515514	FBXL19-AS1	Q494R0	122 aa		11.27	□□□□□ -0.61
CDK18-223	ENST00000515514	SPIN4	Q56A73	249 aa		11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms