RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 PSMB7Q99436 277 aa3.99□□□□□ -1.77
HMGCS1-207ENST00000514610 GPR174Q9BXC1 333 aa3.99□□□□□ -1.77
HMGCS1-207ENST00000514610 FTHL17Q9BXU8 183 aa3.99□□□□□ -1.77
HMGCS1-207ENST00000514610 NINJ2Q9NZG7 142 aa3.99□□□□□ -1.77
HMGCS1-207ENST00000514610 ARMCX1Q9P291 453 aa3.99□□□□□ -1.77
HMGCS1-207ENST00000514610 EMCNQ9ULC0 261 aa3.99□□□□□ -1.77
HMGCS1-207ENST00000514610 ZNF840PA6NDX5 716 aa3.98□□□□□ -1.77
HMGCS1-207ENST00000514610 CYB561D2O14569 222 aa3.98□□□□□ -1.77
HMGCS1-207ENST00000514610 SH3BGRLO75368 114 aa3.98□□□□□ -1.77
HMGCS1-207ENST00000514610 SEC22BO75396 215 aa3.98□□□□□ -1.77
HMGCS1-207ENST00000514610 HPP00738 406 aa3.98□□□□□ -1.77
HMGCS1-207ENST00000514610 ELK3P41970 407 aa3.98□□□□□ -1.77
HMGCS1-207ENST00000514610 MATKP42679 507 aa3.98□□□□□ -1.77
HMGCS1-207ENST00000514610 RABIFP47224 123 aa3.98□□□□□ -1.77
HMGCS1-207ENST00000514610 HAND2P61296 217 aa3.98□□□□□ -1.77
HMGCS1-207ENST00000514610 BTG3Q14201 252 aaPredicted RBP3.98□□□□□ -1.77
HMGCS1-207ENST00000514610 SLC1A5Q15758 541 aa3.98□□□□□ -1.77
HMGCS1-207ENST00000514610 C14orf28Q4W4Y0 310 aa3.98□□□□□ -1.77
HMGCS1-207ENST00000514610 ACER2Q5QJU3 275 aa3.98□□□□□ -1.77
HMGCS1-207ENST00000514610 DPY19L2P2Q6ZN68 376 aa3.98□□□□□ -1.77
HMGCS1-207ENST00000514610 PRSS48Q7RTY5 328 aa3.98□□□□□ -1.77
HMGCS1-207ENST00000514610 CDC20BQ86Y33 519 aa3.98□□□□□ -1.77
HMGCS1-207ENST00000514610 HIPK1Q86Z02 1210 aa3.98□□□□□ -1.77
HMGCS1-207ENST00000514610 PYROXD2Q8N2H3 581 aa3.98□□□□□ -1.77
HMGCS1-207ENST00000514610 MLKLQ8NB16 471 aa3.98□□□□□ -1.77
HMGCS1-207ENST00000514610 NSMCE2Q96MF7 247 aa3.98□□□□□ -1.77
HMGCS1-207ENST00000514610 RPP25Q9BUL9 199 aaKnown RBP3.98□□□□□ -1.77
HMGCS1-207ENST00000514610 RNF41Q9H4P4 317 aaPredicted RBP3.98□□□□□ -1.77
HMGCS1-207ENST00000514610 HOMER3Q9NSC5 361 aa3.98□□□□□ -1.77
HMGCS1-207ENST00000514610 ZNF581Q9P0T4 197 aa3.98□□□□□ -1.77
HMGCS1-207ENST00000514610 DHRS4-AS1Q9P1J3 65 aa3.98□□□□□ -1.77
HMGCS1-207ENST00000514610 IL20RAQ9UHF4 553 aa3.98□□□□□ -1.77
HMGCS1-207ENST00000514610 CCPG1Q9ULG6 757 aa3.98□□□□□ -1.77
HMGCS1-207ENST00000514610 RNF24Q9Y225 148 aa3.98□□□□□ -1.77
HMGCS1-207ENST00000514610 A0A087WWV3 80 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 RANBP6O60518 1105 aaKnown RBP3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 ZNF253O75346 499 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 FAM200BP0CF97 657 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 ETS1P14921 441 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 TMOD1P28289 359 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 PPP2R1BP30154 601 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 HSPA1LP34931 641 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 SAA4P35542 130 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 HMGCLP35914 325 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 SLC6A8P48029 635 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 MFAP2P55001 183 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 VCPP55072 806 aaKnown RBP3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 RAG2P55895 527 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 GSTO1P78417 241 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 NAAAQ02083 359 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 ZNF85Q03923 595 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 GAMTQ14353 236 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 ABRAXAS2Q15018 415 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 LTB4RQ15722 352 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 CD226Q15762 336 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 ZSWIM7Q19AV6 140 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 CCDC40Q4G0X9 1142 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 HIGD2BQ4VC39 106 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 PARP10Q53GL7 1025 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 ZNF774Q6NX45 483 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 ATRAIDQ6UW56 229 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 FAM159AQ6UWV7 190 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 ABRAXAS1Q6UWZ7 409 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 CWC27Q6UX04 472 aaKnown RBP3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 CCBE1Q6UXH8 406 aaPredicted RBP3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 OR4F17Q8NGA8 305 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 CCDC51Q96ER9 411 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 OR4F4Q96R69 305 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 RANBP9Q96S59 729 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 FAM124BQ9H5Z6 455 aaPredicted RBP3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 ALG9Q9H6U8 611 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 ELL3Q9HB65 397 aaPredicted RBP3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 CLEC5AQ9NY25 188 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 CLIP2Q9UDT6 1046 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 SYNJ2O15056 1496 aa3.97□□□□□ -1.77
HMGCS1-207ENST00000514610 ZNF487B1APH4 448 aa3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 LRRTM2O43300 516 aa3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 BCL2L11O43521 198 aa3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 GPRIN2O60269 458 aa3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 MT-ATP6P00846 226 aa3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 TGFAP01135 160 aa3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 IGHV3-9P01782 118 aa3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 CCDC192P0DO97 292 aa3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 HSD17B1P14061 328 aa3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 GAP43P17677 238 aa3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 MYBPC1Q00872 1141 aa3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 FUT7Q11130 342 aa3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 SHROOM1Q2M3G4 852 aaPredicted RBP3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 TAF3Q5VWG9 929 aa3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 APOOLQ6UXV4 268 aa3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 TMEM26Q6ZUK4 368 aa3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 MRPL43Q8N983 215 aaKnown RBP3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 BEST4Q8NFU0 473 aa3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 ZNF671Q8TAW3 534 aa3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 DQX1Q8TE96 717 aaKnown RBP3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 CRYGNQ8WXF5 182 aa3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 MRPL38Q96DV4 380 aaKnown RBP3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 SAMD8Q96LT4 415 aa3.96□□□□□ -1.78
HMGCS1-207ENST00000514610 C19orf43Q9BQ61 176 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms