RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 ELP5Q8TE02 316 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 ZNF721Q8TF20 911 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 TSPEARQ8WU66 669 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 APOBEC4Q8WW27 367 aaKnown RBP7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 OR5P2Q8WZ92 322 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 NCLNQ969V3 563 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 CTHRC1Q96CG8 243 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 SPDL1Q96EA4 605 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 SENP5Q96HI0 755 aaPredicted RBP7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 OR52E6Q96RD3 313 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 SEMA4CQ9C0C4 833 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 OR8D2Q9GZM6 311 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 NMUR2Q9GZQ4 415 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 LHPPQ9H008 270 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 ING2Q9H160 280 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 RMND5AQ9H871 391 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 SAR1AQ9NR31 198 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 DDX18Q9NVP1 670 aaKnown RBP7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 TAS2R9Q9NYW1 312 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 PTGFRNQ9P2B2 879 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 ZNF639Q9UID6 485 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 BTNL2Q9UIR0 455 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 PCDHGB4Q9UN71 923 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 CFL2Q9Y281 166 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 ARL2BPQ9Y2Y0 163 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 KCNMB2Q9Y691 235 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 CAPN7Q9Y6W3 813 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 HEATR5AQ86XA9 2040 aa7.06□□□□□ -1.28
HMGXB3-204ENST00000513318 LAMA5O15230 3695 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 TRBV11-1A0A0K0K1C0 115 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 PRSS51A0A1B0GVH4 220 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 CCDC154A6NI56 674 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 OR6C76A6NM76 312 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 FIGNL2A6NMB9 653 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 FCHO1O14526 889 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 NDUFAB1O14561 156 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 SCN2BO60939 215 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 COQ9O75208 318 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 DCTN3O75935 186 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 C6orf47O95873 294 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 CBX7O95931 251 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 ITGB2P05107 769 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 ITGAMP11215 1152 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 EFNA1P20827 205 aaPredicted RBP7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 ITGA3P26006 1051 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 SSTR4P31391 388 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 PTGER1P34995 402 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 SOX18P35713 384 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 MC3RP41968 323 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 CDK9P50750 372 aaKnown RBP7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 GPR143P51810 404 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 DGKQP52824 942 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 SLC37A1P57057 533 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 HBA1P69905 142 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 PHC1P78364 1004 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 PRR5P85299 388 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 Q0VFX4 171 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 MGAT2Q10469 447 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 CHAF1BQ13112 559 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 KLF10Q13118 480 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 UBAP2LQ14157 1087 aaKnown RBP7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 MAPRE2Q15555 327 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 FHL5Q5TD97 284 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 FAM111BQ6SJ93 734 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 TMEM107Q6UX40 140 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 TMEM64Q6YI46 380 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 GK5Q6ZS86 529 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 SLC29A4Q7RTT9 530 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 GPR155Q7Z3F1 870 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 FUNDC1Q8IVP5 155 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 CLECL1Q8IZS7 167 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 OR2L13Q8N349 312 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 GALNT16Q8N428 558 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 ANKS4BQ8N8V4 417 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 CCDC197Q8NCU1 140 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 OR7G2Q8NG99 324 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 GOT1L1Q8NHS2 421 aaPredicted RBP7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 NUBPLQ8TB37 319 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 SFXN5Q8TD22 340 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 BCAS4Q8TDM0 211 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 NUDT8Q8WV74 236 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 KAT2AQ92830 837 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 ELP4Q96EB1 424 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 THOC3Q96J01 351 aaKnown RBP7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 CCDC115Q96NT0 180 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 MS4A4EQ96PG1 132 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 NUDT9Q9BW91 350 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 OR10A5Q9H207 317 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 PRORYQ9H606 182 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 C3orf14Q9HBI5 128 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 SIRT3Q9NTG7 399 aaPredicted RBP7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 GPR83Q9NYM4 423 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 PRODH2Q9UF12 536 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 BCAP29Q9UHQ4 241 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 ZNF223Q9UK11 482 aaPredicted RBP7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 C19orf53Q9UNZ5 99 aaPredicted RBP7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 HRH3Q9Y5N1 445 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 DNAJC13O75165 2243 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 MPDZO75970 2070 aa7.05□□□□□ -1.28
HMGXB3-204ENST00000513318 NCKAP5O14513 1909 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms