RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 THBS2P35442 1172 aa10.1□□□□□ -0.79
RNF4-218ENST00000513284 CLDN15P56746 228 aa10.1□□□□□ -0.79
RNF4-218ENST00000513284 PCDH1Q08174 1060 aa10.1□□□□□ -0.79
RNF4-218ENST00000513284 STEAP4Q687X5 459 aa10.1□□□□□ -0.79
RNF4-218ENST00000513284 C18orf63Q68DL7 685 aa10.1□□□□□ -0.79
RNF4-218ENST00000513284 ANGPTL8Q6UXH0 198 aa10.1□□□□□ -0.79
RNF4-218ENST00000513284 SLC29A4Q7RTT9 530 aa10.1□□□□□ -0.79
RNF4-218ENST00000513284 PRR22Q8IZ63 422 aa10.1□□□□□ -0.79
RNF4-218ENST00000513284 ARIH2OSQ8N7S6 290 aa10.1□□□□□ -0.79
RNF4-218ENST00000513284 SRFBP1Q8NEF9 429 aaKnown RBP10.1□□□□□ -0.79
RNF4-218ENST00000513284 OR1J4Q8NGS1 313 aa10.1□□□□□ -0.79
RNF4-218ENST00000513284 AKAP1Q92667 903 aaKnown RBP eCLIP10.1□□□□□ -0.79
RNF4-218ENST00000513284 CDKL2Q92772 493 aa10.1□□□□□ -0.79
RNF4-218ENST00000513284 TP53INP1Q96A56 240 aa10.1□□□□□ -0.79
RNF4-218ENST00000513284 TSPAN17Q96FV3 270 aa10.1□□□□□ -0.79
RNF4-218ENST00000513284 SORBS1Q9BX66 1292 aaKnown RBP10.1□□□□□ -0.79
RNF4-218ENST00000513284 OR2B2Q9GZK3 357 aa10.1□□□□□ -0.79
RNF4-218ENST00000513284 ROGDIQ9GZN7 287 aa10.1□□□□□ -0.79
RNF4-218ENST00000513284 ACBD3Q9H3P7 528 aa10.1□□□□□ -0.79
RNF4-218ENST00000513284 POPDC3Q9HBV1 291 aa10.1□□□□□ -0.79
RNF4-218ENST00000513284 SERHLQ9NQF3 203 aa10.1□□□□□ -0.79
RNF4-218ENST00000513284 CDC42EP3Q9UKI2 254 aa10.1□□□□□ -0.79
RNF4-218ENST00000513284 ALPK2Q86TB3 2170 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 C2orf92A0A1B0GVN3 265 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 A0A1W2PS29 197 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 NPEPPSL1A6NEC2 478 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 ICOSLGO75144 302 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 BANF1O75531 89 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 SIX3O95343 332 aaPredicted RBP10.09□□□□□ -0.79
RNF4-218ENST00000513284 IGHV4-39P01824 125 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 CRHP06850 196 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 COX7A2P14406 83 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 ALOX15P16050 662 aaPredicted RBP10.09□□□□□ -0.79
RNF4-218ENST00000513284 ZNF708P17019 499 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 TBXA2RP21731 343 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 CPN2P22792 545 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 SSTR4P31391 388 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 KCNC1P48547 511 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 RPS4XP62701 263 aaKnown RBP10.09□□□□□ -0.79
RNF4-218ENST00000513284 LAPTM5Q13571 262 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 ETFDHQ16134 617 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 HIST2H2ACQ16777 129 aaPredicted RBP10.09□□□□□ -0.79
RNF4-218ENST00000513284 SPRED3Q2MJR0 410 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 MSS51Q4VC12 460 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 BEX5Q5H9J7 111 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 PAGE2BQ5JRK9 111 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 HIST2H2AA3Q6FI13 130 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 RNF111Q6ZNA4 994 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 GRAMD2AQ8IUY3 354 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 ST13P4Q8IZP2 240 aaPredicted RBP10.09□□□□□ -0.79
RNF4-218ENST00000513284 TAGAPQ8N103 731 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 ZNF615Q8N8J6 731 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 CNEP1R1Q8N9A8 125 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 RAB3IL1Q8TBN0 382 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 RDH11Q8TC12 318 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 FIG4Q92562 907 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 HGDQ93099 445 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 PLPPR2Q96GM1 343 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 KCNC2Q96PR1 638 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 NODALQ96S42 347 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 TBCDQ9BTW9 1192 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 MS4A8Q9BY19 250 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 RHOJQ9H4E5 214 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 EHD1Q9H4M9 534 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 RPF2Q9H7B2 306 aaKnown RBP10.09□□□□□ -0.79
RNF4-218ENST00000513284 GALNT9Q9HCQ5 603 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 RYDENQ9NUL5 291 aaKnown RBP10.09□□□□□ -0.79
RNF4-218ENST00000513284 SLC17A6Q9P2U8 582 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 RNF112Q9ULX5 631 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 EXO1Q9UQ84 846 aaKnown RBP10.09□□□□□ -0.79
RNF4-218ENST00000513284 TEX264Q9Y6I9 313 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 TGP01266 2768 aa10.09□□□□□ -0.79
RNF4-218ENST00000513284 OR6C76A6NM76 312 aa10.08□□□□□ -0.8
RNF4-218ENST00000513284 CAPN14A8MX76 684 aa10.08□□□□□ -0.8
RNF4-218ENST00000513284 CCDC188H7C350 402 aa10.08□□□□□ -0.8
RNF4-218ENST00000513284 TAPBPO15533 448 aa10.08□□□□□ -0.8
RNF4-218ENST00000513284 DYRK3O43781 588 aa10.08□□□□□ -0.8
RNF4-218ENST00000513284 ZIC3O60481 467 aa10.08□□□□□ -0.8
RNF4-218ENST00000513284 SH3BGRLO75368 114 aa10.08□□□□□ -0.8
RNF4-218ENST00000513284 SCELO95171 688 aa10.08□□□□□ -0.8
RNF4-218ENST00000513284 AIFM1O95831 613 aa10.08□□□□□ -0.8
RNF4-218ENST00000513284 S100BP04271 92 aaPredicted RBP10.08□□□□□ -0.8
RNF4-218ENST00000513284 EPORP19235 508 aa10.08□□□□□ -0.8
RNF4-218ENST00000513284 HIST1H1TP22492 207 aaPredicted RBP10.08□□□□□ -0.8
RNF4-218ENST00000513284 CDKN1AP38936 164 aa10.08□□□□□ -0.8
RNF4-218ENST00000513284 PAFAH1B1P43034 410 aa10.08□□□□□ -0.8
RNF4-218ENST00000513284 DR1Q01658 176 aa10.08□□□□□ -0.8
RNF4-218ENST00000513284 OCRLQ01968 901 aa10.08□□□□□ -0.8
RNF4-218ENST00000513284 SLAMF1Q13291 335 aa10.08□□□□□ -0.8
RNF4-218ENST00000513284 GUSBP1Q15486 140 aa10.08□□□□□ -0.8
RNF4-218ENST00000513284 CDKL4Q5MAI5 379 aa10.08□□□□□ -0.8
RNF4-218ENST00000513284 HP1BP3Q5SSJ5 553 aaPredicted RBP10.08□□□□□ -0.8
RNF4-218ENST00000513284 TRMT10BQ6PF06 316 aaKnown RBP10.08□□□□□ -0.8
RNF4-218ENST00000513284 ENPP6Q6UWR7 440 aa10.08□□□□□ -0.8
RNF4-218ENST00000513284 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.08□□□□□ -0.8
RNF4-218ENST00000513284 MILR1Q7Z6M3 343 aa10.08□□□□□ -0.8
RNF4-218ENST00000513284 ZC3HC1Q86WB0 502 aaKnown RBP10.08□□□□□ -0.8
RNF4-218ENST00000513284 IGDCC3Q8IVU1 814 aa10.08□□□□□ -0.8
RNF4-218ENST00000513284 NEUROG1Q92886 237 aa10.08□□□□□ -0.8
RNF4-218ENST00000513284 RIT1Q92963 219 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms