RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 SNX6Q9UNH7 406 aa13.46□□□□□ -0.25
CCHCR1-229ENST00000512418 DTX4Q9Y2E6 619 aa13.46□□□□□ -0.25
CCHCR1-229ENST00000512418 PCDHA9Q9Y5H5 950 aa13.46□□□□□ -0.25
CCHCR1-229ENST00000512418 FREM3P0C091 2139 aa13.46□□□□□ -0.26
CCHCR1-229ENST00000512418 SYT5O00445 386 aa13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 CTAG2O75638 210 aa13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 PPM1BO75688 479 aa13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 NAGAP17050 411 aa13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 CSNK2A2P19784 350 aaPredicted RBP13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 S1PR1P21453 382 aa13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 UQCRC1P31930 480 aa13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 CEACAM8P31997 349 aaPredicted RBP13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 DEKP35659 375 aaKnown RBP13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 KIR2DL3P43628 341 aa13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 ASCL1P50553 236 aa13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 GALNT1Q10472 559 aaPredicted RBP13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 MAP4K2Q12851 820 aa13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 WHAMMP3Q1A5X7 153 aa13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 PRICKLE4Q2TBC4 344 aa13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 NHSL2Q5HYW2 709 aa13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 VASNQ6EMK4 673 aa13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 LETMD1Q6P1Q0 360 aa13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 TMEM81Q6P7N7 255 aa13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 PRR22Q8IZ63 422 aa13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 RELL2Q8NC24 303 aaPredicted RBP13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 NAXEQ8NCW5 288 aa13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 TNIP2Q8NFZ5 429 aa13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 ZNF483Q8TF39 744 aaPredicted RBP13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 SELENOMQ8WWX9 145 aa13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 FMO2Q99518 471 aa13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 SH3GL2Q99962 352 aa13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 C1QTNF3Q9BXJ4 246 aa13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 NXF5Q9H1B4 397 aaKnown RBP13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 METTL7AQ9H8H3 244 aa13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 FARSBQ9NSD9 589 aaKnown RBP13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 DNAJB12Q9NXW2 375 aaKnown RBP13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 MAT2BQ9NZL9 334 aa13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 ZNF629Q9UEG4 869 aaPredicted RBP13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 ZNF180Q9UJW8 692 aa13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 PSME2Q9UL46 239 aa13.45□□□□□ -0.26
CCHCR1-229ENST00000512418 A0A1B0GTL3 188 aa13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 A8MT66 165 aa13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 ERAL1O75616 437 aaKnown RBP13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 URI1O94763 535 aaPredicted RBP13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 PDYNP01213 254 aa13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 IL2RAP01589 272 aa13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 ABCB1P08183 1280 aaPredicted RBP13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 FEN1P39748 380 aaKnown RBP13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 CDH13P55290 713 aa13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 MGAT2Q10469 447 aa13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 TOMM20Q15388 145 aa13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 NNATQ16517 81 aa13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 FBXL19-AS1Q494R0 122 aa13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 NSUN5P2Q63ZY6 315 aa13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 TIGD3Q6B0B8 471 aa13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 RPS27LQ71UM5 84 aaKnown RBP13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 OR1J4Q8NGS1 313 aa13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 DCAKDQ8WVC6 231 aa13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 NRGNQ92686 78 aa13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 NINJ1Q92982 152 aa13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 RNASE6Q93091 150 aaKnown RBP13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 KLHL29Q96CT2 875 aa13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 NTNG2Q96CW9 530 aa13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 FAIM2Q9BWQ8 316 aa13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 ITPAQ9BY32 194 aa13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 NMRK1Q9NWW6 199 aa13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 TRPS1Q9UHF7 1281 aa13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 BCAP29Q9UHQ4 241 aa13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 DMGDHQ9UI17 866 aaKnown RBP13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 ZNF639Q9UID6 485 aa13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 FOXD3Q9UJU5 478 aaPredicted RBP13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 SLC6A5Q9Y345 797 aa13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 ZFHX3Q15911 3703 aa13.44□□□□□ -0.26
CCHCR1-229ENST00000512418 CD8B2A6NJW9 211 aa13.43□□□□□ -0.26
CCHCR1-229ENST00000512418 KDM4EB2RXH2 506 aaPredicted RBP13.43□□□□□ -0.26
CCHCR1-229ENST00000512418 TRIM49D1C9J1S8 452 aa13.43□□□□□ -0.26
CCHCR1-229ENST00000512418 POC1B-GALNT4F8VUJ3 575 aa13.43□□□□□ -0.26
CCHCR1-229ENST00000512418 PPP6CO00743 305 aa13.43□□□□□ -0.26
CCHCR1-229ENST00000512418 GNB5O14775 395 aa13.43□□□□□ -0.26
CCHCR1-229ENST00000512418 ACOX3O15254 700 aa13.43□□□□□ -0.26
CCHCR1-229ENST00000512418 SBK3P0C264 359 aa13.43□□□□□ -0.26
CCHCR1-229ENST00000512418 RHOXF2BP0C7M4 288 aa13.43□□□□□ -0.26
CCHCR1-229ENST00000512418 BMP7P18075 431 aa13.43□□□□□ -0.26
CCHCR1-229ENST00000512418 PTPN6P29350 595 aa13.43□□□□□ -0.26
CCHCR1-229ENST00000512418 IST1P53990 364 aa13.43□□□□□ -0.26
CCHCR1-229ENST00000512418 WNT3P56703 355 aa13.43□□□□□ -0.26
CCHCR1-229ENST00000512418 TRA2BP62995 288 aaKnown RBP13.43□□□□□ -0.26
CCHCR1-229ENST00000512418 PLCXD2Q0VAA5 305 aa13.43□□□□□ -0.26
CCHCR1-229ENST00000512418 SNTA1Q13424 505 aa13.43□□□□□ -0.26
CCHCR1-229ENST00000512418 SNTB1Q13884 538 aaKnown RBP13.43□□□□□ -0.26
CCHCR1-229ENST00000512418 EXOSC7Q15024 291 aaKnown RBP13.43□□□□□ -0.26
CCHCR1-229ENST00000512418 EIPR1Q53HC9 387 aa13.43□□□□□ -0.26
CCHCR1-229ENST00000512418 WIPI1Q5MNZ9 446 aaPredicted RBP13.43□□□□□ -0.26
CCHCR1-229ENST00000512418 FAM111BQ6SJ93 734 aa13.43□□□□□ -0.26
CCHCR1-229ENST00000512418 NUP54Q7Z3B4 507 aa13.43□□□□□ -0.26
CCHCR1-229ENST00000512418 MMP21Q8N119 569 aa13.43□□□□□ -0.26
CCHCR1-229ENST00000512418 MMGT1Q8N4V1 131 aa13.43□□□□□ -0.26
CCHCR1-229ENST00000512418 C1orf52Q8N6N3 182 aaKnown RBP13.43□□□□□ -0.26
CCHCR1-229ENST00000512418 IFT81Q8WYA0 676 aa13.43□□□□□ -0.26
CCHCR1-229ENST00000512418 HGDQ93099 445 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms