RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 VIPR1P32241 457 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 CCR7P32248 378 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 ARL4AP40617 200 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 HTR6P50406 440 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 TBX4P57082 545 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 PURAQ00577 322 aaKnown RBP6.95□□□□□ -1.3
CPNE4-208ENST00000511604 NFKB2Q00653 900 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 TLE2Q04725 743 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 TSNQ15631 228 aaKnown RBP6.95□□□□□ -1.3
CPNE4-208ENST00000511604 MAJINQ3KP22 176 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 PKDCCQ504Y2 493 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 LIPKQ5VXJ0 399 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 ZNF660Q6AZW8 331 aaPredicted RBP6.95□□□□□ -1.3
CPNE4-208ENST00000511604 PLBD1Q6P4A8 553 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 ZCCHC12Q6PEW1 402 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 GSG1LQ6UXU4 331 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 ZNF551Q7Z340 670 aaPredicted RBP6.95□□□□□ -1.3
CPNE4-208ENST00000511604 DEFB106AQ8N104 65 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 ZNF383Q8NA42 475 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 C2CD4AQ8NCU7 369 aaPredicted RBP6.95□□□□□ -1.3
CPNE4-208ENST00000511604 OR4A15Q8NGL6 344 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 SLC35F5Q8WV83 523 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 GATAD2BQ8WXI9 593 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 C12orf42Q96LP6 360 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 KCTD7Q96MP8 289 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 GPR61Q9BZJ8 451 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 TGIF2Q9GZN2 237 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 DUSP15Q9H1R2 295 aaPredicted RBP6.95□□□□□ -1.3
CPNE4-208ENST00000511604 SLC25A32Q9H2D1 315 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 SUV39H2Q9H5I1 410 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 RERGLQ9H628 205 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 XKR8Q9H6D3 395 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 MINDY3Q9H8M7 445 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 REEP1Q9H902 201 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 IMP3Q9NV31 184 aaKnown RBP6.95□□□□□ -1.3
CPNE4-208ENST00000511604 MARCH4Q9P2E8 410 aaPredicted RBP6.95□□□□□ -1.3
CPNE4-208ENST00000511604 LHX6Q9UPM6 363 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 WASF3Q9UPY6 502 aa6.95□□□□□ -1.3
CPNE4-208ENST00000511604 LOC285095A0A1B0GVY8 99 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 A0A1W2PPE3 182 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 TMEM218A2RU14 115 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 RFPL4AA6NLU0 287 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 RFPL4AL1F8VTS6 287 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 DCLK1O15075 740 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 KHDRBS3O75525 346 aaKnown RBP6.94□□□□□ -1.3
CPNE4-208ENST00000511604 FABP3P05413 133 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 OR8U8P0C7N1 319 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 ODC1P11926 461 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 PEPDP12955 493 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 UGT2B7P16662 529 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 ADCYAP1P18509 176 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 ADORA2BP29275 332 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 CAP2P40123 477 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 NDUFV1P49821 464 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 PPT1P50897 306 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 ITGA1P56199 1179 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 UBE2IP63279 158 aaKnown RBP6.94□□□□□ -1.3
CPNE4-208ENST00000511604 VLDLRP98155 873 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 ILF3Q12906 894 aaKnown RBP eCLIP6.94□□□□□ -1.3
CPNE4-208ENST00000511604 ELAVL2Q12926 359 aaKnown RBP6.94□□□□□ -1.3
CPNE4-208ENST00000511604 MAPKAPK3Q16644 382 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 SGO1Q5FBB7 561 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 TMEM255AQ5JRV8 349 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 HECTD2Q5U5R9 776 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 LIPJQ5W064 366 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 ABHD15Q6UXT9 468 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 DEF8Q6ZN54 512 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 Q6ZSR9 355 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 HFE2Q6ZVN8 426 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 TMUB2Q71RG4 321 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 PLEKHH3Q7Z736 793 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 SLC44A3Q8N4M1 653 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 RELL2Q8NC24 303 aaPredicted RBP6.94□□□□□ -1.3
CPNE4-208ENST00000511604 OR6X1Q8NH79 312 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 OR10J5Q8NHC4 309 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 RFT1Q96AA3 541 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 MARS2Q96GW9 593 aaKnown RBP6.94□□□□□ -1.3
CPNE4-208ENST00000511604 TEFMQ96QE5 360 aaKnown RBP6.94□□□□□ -1.3
CPNE4-208ENST00000511604 SGIP1Q9BQI5 828 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 THAP7Q9BT49 309 aaPredicted RBP6.94□□□□□ -1.3
CPNE4-208ENST00000511604 POLDIP3Q9BY77 421 aaKnown RBP6.94□□□□□ -1.3
CPNE4-208ENST00000511604 TMPRSS13Q9BYE2 586 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 PRKD2Q9BZL6 878 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 POLR2J2Q9GZM3 115 aaKnown RBP6.94□□□□□ -1.3
CPNE4-208ENST00000511604 KLHL31Q9H511 634 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 BARX1Q9HBU1 254 aaPredicted RBP6.94□□□□□ -1.3
CPNE4-208ENST00000511604 PXMP2Q9NR77 195 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 NLGN3Q9NZ94 848 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 MBD1Q9UIS9 605 aaPredicted RBP6.94□□□□□ -1.3
CPNE4-208ENST00000511604 DUSP12Q9UNI6 340 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 KCTD3Q9Y597 815 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 CXorf65A6NEN9 183 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 FZD7O75084 574 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 CRCPO75575 148 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 LATS1O95835 1130 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 HPXP02790 462 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 ATXN1LP0C7T5 689 aaKnown RBP6.94□□□□□ -1.3
CPNE4-208ENST00000511604 TFPIP10646 304 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 BPIP17213 487 aa6.94□□□□□ -1.3
CPNE4-208ENST00000511604 GJA1P17302 382 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms