RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 NPIPA2E9PIF3 369 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 NPIPA3F8WFD2 350 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 UBFD1O14562 309 aaKnown RBP17.16■□□□□ 0.34
UBE3D-207ENST00000509102 SUSD5O60279 629 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 SNX4O95219 450 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 SLU7O95391 586 aaKnown RBP17.16■□□□□ 0.34
UBE3D-207ENST00000509102 CLDN14O95500 239 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 CHEK2O96017 543 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 IGHG3P01860 377 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 GPX3P22352 226 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 MPIP34949 423 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 MASP1P48740 699 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 SLC18A2Q05940 514 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 ZNF763Q0D2J5 394 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 FOXO1Q12778 655 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 GTF3C1Q12789 2109 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 ZNF630Q2M218 657 aaPredicted RBP17.16■□□□□ 0.34
UBE3D-207ENST00000509102 ERCC6LQ2NKX8 1250 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 FAM111BQ6SJ93 734 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 PACS2Q86VP3 889 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 LIX1Q8N485 282 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 ADCY4Q8NFM4 1077 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 FAM76AQ8TAV0 307 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 C16orf78Q8WTQ4 265 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 CA5BP1Q8WTZ4 195 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 ADIPOR1Q96A54 375 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 MARVELD3Q96A59 401 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 EXOSC8Q96B26 276 aaKnown RBP17.16■□□□□ 0.34
UBE3D-207ENST00000509102 SARAFQ96BY9 339 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 ERP27Q96DN0 273 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 HSPBAP1Q96EW2 488 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 CNRIP1Q96F85 164 aaPredicted RBP17.16■□□□□ 0.34
UBE3D-207ENST00000509102 APOPT1Q96IL0 206 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 BBS4Q96RK4 519 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 EBPLQ9BY08 206 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 ROPN1BQ9BZX4 212 aaPredicted RBP17.16■□□□□ 0.34
UBE3D-207ENST00000509102 ROPN1Q9HAT0 212 aaPredicted RBP17.16■□□□□ 0.34
UBE3D-207ENST00000509102 MIEF1Q9NQG6 463 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 SIRT5Q9NXA8 310 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 QPCTLQ9NXS2 382 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 ACAD8Q9UKU7 415 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 WBP11Q9Y2W2 641 aaKnown RBP17.16■□□□□ 0.34
UBE3D-207ENST00000509102 NOTCH2Q04721 2471 aa17.16■□□□□ 0.34
UBE3D-207ENST00000509102 TRGV5A0A0B4J1U4 118 aa17.15■□□□□ 0.34
UBE3D-207ENST00000509102 AQP7O14520 342 aa17.15■□□□□ 0.34
UBE3D-207ENST00000509102 ACOX3O15254 700 aa17.15■□□□□ 0.34
UBE3D-207ENST00000509102 HCN1O60741 890 aa17.15■□□□□ 0.34
UBE3D-207ENST00000509102 TRIM13O60858 407 aa17.15■□□□□ 0.34
UBE3D-207ENST00000509102 RSL1D1O76021 490 aaKnown RBP17.15■□□□□ 0.34
UBE3D-207ENST00000509102 NAGAP17050 411 aa17.15■□□□□ 0.34
UBE3D-207ENST00000509102 FOXA1P55317 472 aa17.15■□□□□ 0.34
UBE3D-207ENST00000509102 FBXW4P57775 412 aa17.15■□□□□ 0.34
UBE3D-207ENST00000509102 RAE1P78406 368 aaKnown RBP17.15■□□□□ 0.34
UBE3D-207ENST00000509102 TRILQ7L0X0 811 aa17.15■□□□□ 0.34
UBE3D-207ENST00000509102 TRIM46Q7Z4K8 759 aa17.15■□□□□ 0.34
UBE3D-207ENST00000509102 OR52R1Q8NGF1 315 aa17.15■□□□□ 0.34
UBE3D-207ENST00000509102 OR2W6PQ8NHA6 318 aa17.15■□□□□ 0.34
UBE3D-207ENST00000509102 ZNF675Q8TD23 568 aa17.15■□□□□ 0.34
UBE3D-207ENST00000509102 METTL2AQ96IZ6 378 aaKnown RBP17.15■□□□□ 0.34
UBE3D-207ENST00000509102 LCORQ96JN0 433 aaPredicted RBP17.15■□□□□ 0.34
UBE3D-207ENST00000509102 ZNF681Q96N22 645 aa17.15■□□□□ 0.34
UBE3D-207ENST00000509102 DMRTA2Q96SC8 542 aa17.15■□□□□ 0.34
UBE3D-207ENST00000509102 SLC35C2Q9NQQ7 365 aa17.15■□□□□ 0.34
UBE3D-207ENST00000509102 MKS1Q9NXB0 559 aa17.15■□□□□ 0.34
UBE3D-207ENST00000509102 HEY2Q9UBP5 337 aa17.15■□□□□ 0.34
UBE3D-207ENST00000509102 CNOT11Q9UKZ1 510 aaKnown RBP17.15■□□□□ 0.34
UBE3D-207ENST00000509102 A0A1B0GVC2 190 aa17.14■□□□□ 0.33
UBE3D-207ENST00000509102 SLC28A1O00337 649 aa17.14■□□□□ 0.33
UBE3D-207ENST00000509102 RGS14O43566 566 aa17.14■□□□□ 0.33
UBE3D-207ENST00000509102 S1PR1P21453 382 aa17.14■□□□□ 0.33
UBE3D-207ENST00000509102 ABCD3P28288 659 aa17.14■□□□□ 0.33
UBE3D-207ENST00000509102 PSPHP78330 225 aa17.14■□□□□ 0.33
UBE3D-207ENST00000509102 C2orf80Q0P641 193 aa17.14■□□□□ 0.33
UBE3D-207ENST00000509102 PLCXD2Q0VAA5 305 aa17.14■□□□□ 0.33
UBE3D-207ENST00000509102 EXOSC7Q15024 291 aaKnown RBP17.14■□□□□ 0.33
UBE3D-207ENST00000509102 GXYLT1Q4G148 440 aa17.14■□□□□ 0.33
UBE3D-207ENST00000509102 WLSQ5T9L3 541 aa17.14■□□□□ 0.33
UBE3D-207ENST00000509102 FAM219BQ5XKK7 198 aa17.14■□□□□ 0.33
UBE3D-207ENST00000509102 FAM180BQ6P0A1 224 aa17.14■□□□□ 0.33
UBE3D-207ENST00000509102 WDR93Q6P2C0 686 aa17.14■□□□□ 0.33
UBE3D-207ENST00000509102 TMEM64Q6YI46 380 aa17.14■□□□□ 0.33
UBE3D-207ENST00000509102 ACAD11Q709F0 780 aa17.14■□□□□ 0.33
UBE3D-207ENST00000509102 C10orf107Q8IVU9 208 aa17.14■□□□□ 0.33
UBE3D-207ENST00000509102 SRRM1Q8IYB3 904 aaKnown RBP17.14■□□□□ 0.33
UBE3D-207ENST00000509102 CCDC116Q8IYX3 515 aa17.14■□□□□ 0.33
UBE3D-207ENST00000509102 FAM9CQ8IZT9 166 aa17.14■□□□□ 0.33
UBE3D-207ENST00000509102 SPPL2AQ8TCT8 520 aa17.14■□□□□ 0.33
UBE3D-207ENST00000509102 ASB5Q8WWX0 329 aa17.14■□□□□ 0.33
UBE3D-207ENST00000509102 RND1Q92730 232 aa17.14■□□□□ 0.33
UBE3D-207ENST00000509102 SDCCAG3Q96C92 435 aa17.14■□□□□ 0.33
UBE3D-207ENST00000509102 CTHRC1Q96CG8 243 aa17.14■□□□□ 0.33
UBE3D-207ENST00000509102 ITPAQ9BY32 194 aa17.14■□□□□ 0.33
UBE3D-207ENST00000509102 NXF5Q9H1B4 397 aaKnown RBP17.14■□□□□ 0.33
UBE3D-207ENST00000509102 ZNF703Q9H7S9 590 aaPredicted RBP17.14■□□□□ 0.33
UBE3D-207ENST00000509102 ZNF639Q9UID6 485 aa17.14■□□□□ 0.33
UBE3D-207ENST00000509102 PLLPQ9Y342 182 aa17.14■□□□□ 0.33
UBE3D-207ENST00000509102 CRYBG3Q68DQ2 2970 aa17.14■□□□□ 0.33
UBE3D-207ENST00000509102 PPM1BO75688 479 aa17.13■□□□□ 0.33
UBE3D-207ENST00000509102 NEFHP12036 1026 aa17.13■□□□□ 0.33
UBE3D-207ENST00000509102 COX6B1P14854 86 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms