RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 ATP1B1P05026 303 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 COX6B1P14854 86 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 KRT4P19013 534 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 S1PR1P21453 382 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 TNFRSF8P28908 595 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 TRPC1P48995 793 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 MAN2A2P49641 1150 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 NRG3P56975 720 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 MGAT2Q10469 447 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 DUSP8Q13202 625 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 SLC10A1Q14973 349 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 RPS6KA2Q15349 733 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 NTRK2Q16620 822 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 IMPG1Q17R60 797 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 CCDC153Q494R4 210 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 GXYLT1Q4G148 440 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 TRMT12Q53H54 448 aaKnown RBP13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 SPIN4Q56A73 249 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 CFAP157Q5JU67 520 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 DESI1Q6ICB0 168 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 SH2D5Q6ZV89 423 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 TRILQ7L0X0 811 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 LRRC25Q8N386 305 aaPredicted RBP13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 GBP7Q8N8V2 638 aaPredicted RBP13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 EIF1ADQ8N9N8 165 aaKnown RBP13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 OR7G1Q8NGA0 311 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 OR52R1Q8NGF1 315 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 C16orf78Q8WTQ4 265 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 CA5BP1Q8WTZ4 195 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 PHF10Q8WUB8 498 aaKnown RBP13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 ADIPOR1Q96A54 375 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 CCDC126Q96EE4 140 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 KRTAP3-3Q9BYR6 98 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 KRTAP3-2Q9BYR7 98 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 NXF5Q9H1B4 397 aaKnown RBP13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 SLC6A15Q9H2J7 730 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 ZNF703Q9H7S9 590 aaPredicted RBP13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 ZFP64Q9NPA5 681 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 CHST11Q9NPF2 352 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 COQ3Q9NZJ6 369 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 EHD3Q9NZN3 535 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 CNIH4Q9P003 139 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 CNOT11Q9UKZ1 510 aaKnown RBP13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 PSME2Q9UL46 239 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 GRID1Q9ULK0 1009 aa13.61□□□□□ -0.23
UBE2D3-228ENST00000508974 TRGV5A0A0B4J1U4 118 aa13.6□□□□□ -0.23
UBE2D3-228ENST00000508974 CCDC151A5D8V7 595 aa13.6□□□□□ -0.23
UBE2D3-228ENST00000508974 FAM90A27PA6NNH2 459 aa13.6□□□□□ -0.23
UBE2D3-228ENST00000508974 TP53I11O14683 189 aa13.6□□□□□ -0.23
UBE2D3-228ENST00000508974 IGHG3P01860 377 aa13.6□□□□□ -0.23
UBE2D3-228ENST00000508974 ANXA4P09525 319 aaPredicted RBP13.6□□□□□ -0.23
UBE2D3-228ENST00000508974 CPA3P15088 417 aa13.6□□□□□ -0.23
UBE2D3-228ENST00000508974 PCSK2P16519 638 aa13.6□□□□□ -0.23
UBE2D3-228ENST00000508974 AGAP20933 346 aa13.6□□□□□ -0.23
UBE2D3-228ENST00000508974 GDF1P27539 372 aa13.6□□□□□ -0.23
UBE2D3-228ENST00000508974 TIA1P31483 386 aaKnown RBP eCLIP13.6□□□□□ -0.233e-7■□□□□ 10
UBE2D3-228ENST00000508974 CRHR1P34998 444 aa13.6□□□□□ -0.23
UBE2D3-228ENST00000508974 CCT5P48643 541 aa13.6□□□□□ -0.23
UBE2D3-228ENST00000508974 VSNL1P62760 191 aa13.6□□□□□ -0.23
UBE2D3-228ENST00000508974 TRA2BP62995 288 aaKnown RBP13.6□□□□□ -0.23
UBE2D3-228ENST00000508974 PMPCAQ10713 525 aa13.6□□□□□ -0.23
UBE2D3-228ENST00000508974 FRMD7Q6ZUT3 714 aa13.6□□□□□ -0.23
UBE2D3-228ENST00000508974 CCDC116Q8IYX3 515 aa13.6□□□□□ -0.23
UBE2D3-228ENST00000508974 DND1Q8IYX4 353 aaKnown RBP13.6□□□□□ -0.23
UBE2D3-228ENST00000508974 KAT2AQ92830 837 aa13.6□□□□□ -0.23
UBE2D3-228ENST00000508974 TP53INP1Q96A56 240 aa13.6□□□□□ -0.23
UBE2D3-228ENST00000508974 ZNF597Q96LX8 424 aa13.6□□□□□ -0.23
UBE2D3-228ENST00000508974 RILPQ96NA2 401 aa13.6□□□□□ -0.23
UBE2D3-228ENST00000508974 TNFRSF12AQ9NP84 129 aa13.6□□□□□ -0.23
UBE2D3-228ENST00000508974 ALKBH4Q9NXW9 302 aa13.6□□□□□ -0.23
UBE2D3-228ENST00000508974 SPRR3Q9UBC9 169 aa13.6□□□□□ -0.23
UBE2D3-228ENST00000508974 ACAD8Q9UKU7 415 aa13.6□□□□□ -0.23
UBE2D3-228ENST00000508974 PLLPQ9Y342 182 aa13.6□□□□□ -0.23
UBE2D3-228ENST00000508974 FIS1Q9Y3D6 152 aa13.6□□□□□ -0.23
UBE2D3-228ENST00000508974 NKX2-6A6NCS4 301 aa13.59□□□□□ -0.23
UBE2D3-228ENST00000508974 CAPN14A8MX76 684 aa13.59□□□□□ -0.23
UBE2D3-228ENST00000508974 CDH16O75309 829 aa13.59□□□□□ -0.23
UBE2D3-228ENST00000508974 CBX7O95931 251 aa13.59□□□□□ -0.23
UBE2D3-228ENST00000508974 ABCD3P28288 659 aa13.59□□□□□ -0.23
UBE2D3-228ENST00000508974 SOX18P35713 384 aa13.59□□□□□ -0.23
UBE2D3-228ENST00000508974 MASP1P48740 699 aa13.59□□□□□ -0.23
UBE2D3-228ENST00000508974 TMED10P49755 219 aaKnown RBP13.59□□□□□ -0.23
UBE2D3-228ENST00000508974 NUP107P57740 925 aa13.59□□□□□ -0.23
UBE2D3-228ENST00000508974 MAP4K2Q12851 820 aa13.59□□□□□ -0.23
UBE2D3-228ENST00000508974 HYAL4Q2M3T9 481 aa13.59□□□□□ -0.23
UBE2D3-228ENST00000508974 TMEM198Q66K66 360 aa13.59□□□□□ -0.23
UBE2D3-228ENST00000508974 CLEC6AQ6EIG7 209 aa13.59□□□□□ -0.23
UBE2D3-228ENST00000508974 TDRPQ86YL5 185 aa13.59□□□□□ -0.23
UBE2D3-228ENST00000508974 CCDC71Q8IV32 467 aaPredicted RBP13.59□□□□□ -0.23
UBE2D3-228ENST00000508974 OR9A2Q8NGT5 310 aa13.59□□□□□ -0.23
UBE2D3-228ENST00000508974 SPPL2AQ8TCT8 520 aa13.59□□□□□ -0.23
UBE2D3-228ENST00000508974 ZNF681Q96N22 645 aa13.59□□□□□ -0.23
UBE2D3-228ENST00000508974 B4GALT7Q9UBV7 327 aa13.59□□□□□ -0.23
UBE2D3-228ENST00000508974 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.59□□□□□ -0.23
UBE2D3-228ENST00000508974 RNF6Q9Y252 685 aa13.59□□□□□ -0.23
UBE2D3-228ENST00000508974 POLR3HQ9Y535 204 aaPredicted RBP13.59□□□□□ -0.23
UBE2D3-228ENST00000508974 PTGDR2Q9Y5Y4 395 aa13.59□□□□□ -0.23
UBE2D3-228ENST00000508974 V9GYY5 206 aaPredicted RBP13.59□□□□□ -0.23
UBE2D3-228ENST00000508974 ABCA12Q86UK0 2595 aa13.59□□□□□ -0.23
UBE2D3-228ENST00000508974 ARHGAP21Q5T5U3 1957 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms