RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 SGO1Q5FBB7 561 aa13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 TEX35Q5T0J7 233 aa13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 SLC30A6Q6NXT4 461 aa13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 LETMD1Q6P1Q0 360 aa13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 SCIMPQ6UWF3 145 aa13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 GPRIN3Q6ZVF9 776 aa13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 CCDC71Q8IV32 467 aaPredicted RBP13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 JSRP1Q96MG2 331 aaPredicted RBP13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 ZNF559Q9BR84 538 aa13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 BRINP2Q9C0B6 783 aa13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 PPCSQ9HAB8 311 aa13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 PROK2Q9HC23 129 aa13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 GIMAP4Q9NUV9 329 aa13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 FOXD3Q9UJU5 478 aaPredicted RBP13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 CES1P1Q9UKY3 287 aa13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 FAM215AQ9Y5M1 114 aa13.24□□□□□ -0.29
HMGCS1-203ENST00000507004 WASHC1A8K0Z3 465 aa13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 ERAL1O75616 437 aaKnown RBP13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 PPM1BO75688 479 aa13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 ESRRBO95718 433 aa13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 HPNP05981 417 aa13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 CELA3AP09093 270 aa13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 GPX3P22352 226 aa13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 ABCD3P28288 659 aa13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 CDK9P50750 372 aaKnown RBP13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 LCP2Q13094 533 aa13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 NHSL2Q5HYW2 709 aa13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 ZNF678Q5SXM1 525 aa13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 LACC1Q8IV20 430 aa13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 ULK2Q8IYT8 1036 aa13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 TMEM151AQ8N4L1 468 aa13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 METTL6Q8TCB7 284 aa13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 ZNF675Q8TD23 568 aa13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 TM4SF18Q96CE8 201 aa13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 CTHRC1Q96CG8 243 aa13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 KLHL29Q96CT2 875 aa13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 LCORQ96JN0 433 aaPredicted RBP13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 RILPQ96NA2 401 aa13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 STMN4Q9H169 189 aaPredicted RBP13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 NPDC1Q9NQX5 325 aaPredicted RBP13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 ALKBH4Q9NXW9 302 aa13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 MAT2BQ9NZL9 334 aa13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 PSMC3IPQ9P2W1 217 aaPredicted RBP13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 DCDC2Q9UHG0 476 aa13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 BCAP29Q9UHQ4 241 aa13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 ZNF639Q9UID6 485 aa13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 EDARQ9UNE0 448 aa13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 C15orf41Q9Y2V0 281 aa13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 WBP11Q9Y2W2 641 aaKnown RBP13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 NINQ8N4C6 2090 aa13.23□□□□□ -0.29
HMGCS1-203ENST00000507004 C15orf38-AP3S2A0A0A6YYH1 394 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 A0A0G2JNJ9 132 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 SERTM1A2A2V5 107 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 NKX2-6A6NCS4 301 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 MANBAO00462 879 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 DVL2O14641 736 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 TO15178 435 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 RIPK2O43353 540 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 TRAPPC6AO75865 159 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 SLITRK5O94991 958 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 OR4F21O95013 312 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 EPPINO95925 133 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 SBK3P0C264 359 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 CT62P0C5K7 136 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 RFPL3SP0C7P2 107 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 ENDOUP21128 410 aaKnown RBP13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 DRD5P21918 477 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 TIMP3P35625 211 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 CASP3P42574 277 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 PPICP45877 212 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 PRKAA2P54646 552 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 FBXW4P57775 412 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 MRPS22P82650 360 aaKnown RBP13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 ACSM2AQ08AH3 577 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 DUSP8Q13202 625 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 ACSM2BQ68CK6 577 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 TIGD3Q6B0B8 471 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 RTL6Q6ICC9 239 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 CDH24Q86UP0 819 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 RPRMLQ8N4K4 120 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 C1orf52Q8N6N3 182 aaKnown RBP13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 CDYL2Q8N8U2 506 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 EIF1ADQ8N9N8 165 aaKnown RBP13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 UHMK1Q8TAS1 419 aaKnown RBP13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 TMCO6Q96DC7 493 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 L3HYPDHQ96EM0 354 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 UCK2Q9BZX2 261 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 UBQLN3Q9H347 655 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 METTL7AQ9H8H3 244 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 SIRT5Q9NXA8 310 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 EHD3Q9NZN3 535 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 SPRR3Q9UBC9 169 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 Q9UFV3 132 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 UTS2RQ9UKP6 389 aa13.22□□□□□ -0.29
HMGCS1-203ENST00000507004 APCP25054 2843 aa13.21□□□□□ -0.29
HMGCS1-203ENST00000507004 ACTL6AO96019 429 aa13.21□□□□□ -0.29
HMGCS1-203ENST00000507004 IL2RAP01589 272 aa13.21□□□□□ -0.29
HMGCS1-203ENST00000507004 ABCB1P08183 1280 aaPredicted RBP13.21□□□□□ -0.29
HMGCS1-203ENST00000507004 S1PR1P21453 382 aa13.21□□□□□ -0.29
HMGCS1-203ENST00000507004 FEN1P39748 380 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms