RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 MTHFD2LQ9H903 347 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 SLC25A19Q9HC21 320 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 IKZF3Q9UKT9 509 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 KLHDC2Q9Y2U9 406 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 AP4B1Q9Y6B7 739 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 SLCO1B1Q9Y6L6 691 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 KANK1Q14678 1352 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 CCDC7Q96M83 1385 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 AFF2P51816 1311 aa3.37□□□□□ -1.87
TRAPPC13-208ENST00000505553 PPIAL4CA0A0B4J2A2 164 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 TTC26A0AVF1 554 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 OR5H15A6NDH6 313 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 ZSCAN5BA6NJL1 495 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 ANHXE9PGG2 379 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 B4GALT2O60909 372 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 MTRF1O75570 445 aaKnown RBP3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 CRYAAP02489 173 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 PPIAL4GP0DN37 164 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 MYOGP15173 224 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 ZNF44P15621 663 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 MARK3P27448 753 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 MAT2AP31153 395 aaKnown RBP3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 CCKARP32238 428 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 RPL9P32969 192 aaKnown RBP3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 CYLC1P35663 651 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 ZFP36L2P47974 494 aaKnown RBP3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 XGP55808 180 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 ACTR3P61158 418 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 RPL27P61353 136 aaKnown RBP3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 CSNK2BP67870 215 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 MRPS6P82932 125 aaKnown RBP3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 BEX3Q00994 111 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 GUCY2DQ02846 1103 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 RBBP4Q09028 425 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 NCBP1Q09161 790 aaKnown RBP3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 CUL2Q13617 745 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 IDI1Q13907 227 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 GCKRQ14397 625 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 CDKN3Q16667 212 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 IMMTQ16891 758 aaKnown RBP3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 IZUMO4Q1ZYL8 232 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 DCAF12Q5T6F0 453 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 DMKNQ6E0U4 476 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 SLC35E4Q6ICL7 350 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 RHBDD2Q6NTF9 364 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 SPSB3Q6PJ21 355 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 C9orf139Q6ZV77 190 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 NANOGNBQ7Z5D8 188 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 OR4N5Q8IXE1 308 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 NFAM1Q8NET5 270 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 OR6S1Q8NH40 331 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 RPLP0P6Q8NHW5 317 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 NUDCD2Q8WVJ2 157 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 LIPHQ8WWY8 451 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 EMG1Q92979 244 aaKnown RBP3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 AZIN2Q96A70 460 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 CAPNS2Q96L46 248 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 LRR1Q96L50 414 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 OMDQ99983 421 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 CCDC77Q9BR77 488 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 SLC39A3Q9BRY0 314 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 TBC1D10AQ9BXI6 508 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 PKIBQ9C010 78 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 NCOR1P1Q9H4R4 102 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 DHX33Q9H6R0 707 aaKnown RBP3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 APMAPQ9HDC9 416 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 STARD5Q9NSY2 213 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 C1orf123Q9NWV4 160 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 KLRF1Q9NZS2 232 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 GHRLQ9UBU3 117 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 PTBP2Q9UKA9 531 aaKnown RBP3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 CAB39Q9Y376 341 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 PCDHGB1Q9Y5G3 927 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 SYNRGQ9UMZ2 1314 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 SYNJ2O15056 1496 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 IGKV2D-30A0A075B6S6 120 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 FAM240BA0A1B0GVZ2 78 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 LOC390937A0A1W2PQ73 354 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 FAM47DPA6NHR8 397 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 SMIM1B2RUZ4 78 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 CTAGE5O15320 804 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 INPP4BO15327 924 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 ZNF208O43345 1280 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 FGF17O60258 216 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 KLHL41O60662 606 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 TRMUO75648 421 aaKnown RBP3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 CIB2O75838 187 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 AP2A2O94973 939 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 NXPH2O95156 264 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 RPLP0P05388 317 aaKnown RBP3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 PRSS1P07477 247 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 FHP07954 510 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 TAGLN2P37802 199 aaKnown RBP3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 MTIF2P46199 727 aaKnown RBP3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 HTR5AP47898 357 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 HYAL1Q12794 435 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 MESDQ14696 234 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 SGSM1Q2NKQ1 1148 aa3.36□□□□□ -1.87
TRAPPC13-208ENST00000505553 TCHHL1Q5QJ38 904 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms