RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 ABHD17CQ6PCB6 329 aa10.94□□□□□ -0.66
USP46-204ENST00000503060 CEACAM20Q6UY09 585 aa10.94□□□□□ -0.66
USP46-204ENST00000503060 C6orf120Q7Z4R8 191 aa10.94□□□□□ -0.66
USP46-204ENST00000503060 ALDH16A1Q8IZ83 802 aa10.94□□□□□ -0.66
USP46-204ENST00000503060 OR8H3Q8N146 312 aa10.94□□□□□ -0.66
USP46-204ENST00000503060 HORMAD2Q8N7B1 307 aa10.94□□□□□ -0.66
USP46-204ENST00000503060 ATG16L2Q8NAA4 619 aa10.94□□□□□ -0.66
USP46-204ENST00000503060 CRELD1Q96HD1 420 aa10.94□□□□□ -0.66
USP46-204ENST00000503060 FAIM2Q9BWQ8 316 aa10.94□□□□□ -0.66
USP46-204ENST00000503060 TMEM168Q9H0V1 697 aa10.94□□□□□ -0.66
USP46-204ENST00000503060 PDE7BQ9NP56 450 aa10.94□□□□□ -0.66
USP46-204ENST00000503060 THSD1Q9NS62 852 aa10.94□□□□□ -0.66
USP46-204ENST00000503060 KLHL20Q9Y2M5 609 aa10.94□□□□□ -0.66
USP46-204ENST00000503060 A0A1B0GVG6 124 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 H3BQ06 376 aaPredicted RBP10.93□□□□□ -0.66
USP46-204ENST00000503060 B4GALT2O60909 372 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 SLC5A2P31639 672 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 AKT2P31751 481 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 CLK3P49761 638 aaKnown RBP10.93□□□□□ -0.66
USP46-204ENST00000503060 DCAF7P61962 342 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 RPS26P62854 115 aaKnown RBP10.93□□□□□ -0.66
USP46-204ENST00000503060 PMS2P3Q13401 168 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 TOP3AQ13472 1001 aaPredicted RBP10.93□□□□□ -0.66
USP46-204ENST00000503060 RAPSNQ13702 412 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 KEAP1Q14145 624 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 BROXQ5VW32 411 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 TNFAIP8L2Q6P589 184 aaPredicted RBP10.93□□□□□ -0.66
USP46-204ENST00000503060 SEZ6L2Q6UXD5 910 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 OR2L5Q8NG80 312 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 FBLIM1Q8WUP2 373 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 ZNF300Q96RE9 604 aaPredicted RBP10.93□□□□□ -0.66
USP46-204ENST00000503060 ZNF347Q96SE7 839 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 WDR12Q9GZL7 423 aaKnown RBP10.93□□□□□ -0.66
USP46-204ENST00000503060 SYNPO2LQ9H987 977 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 A4GALTQ9NPC4 353 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 PRDM7Q9NQW5 492 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 KRT84Q9NSB2 600 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 RAB23Q9ULC3 237 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 TESMINQ9Y4I5 508 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 PRAMEF25A6NGN4 478 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 SHISA7A6NL88 538 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 TNFRSF11BO00300 401 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 BTN3A3O00478 584 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 ADAMDEC1O15204 470 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 PLATP00750 562 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 CYP4B1P13584 511 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 HIST1H1TP22492 207 aaPredicted RBP10.93□□□□□ -0.66
USP46-204ENST00000503060 ATP5A1P25705 553 aaKnown RBP10.93□□□□□ -0.66
USP46-204ENST00000503060 SLC19A1P41440 591 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 OR1E2P47887 323 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 GABARAPL2P60520 117 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 SRP54P61011 504 aaKnown RBP10.93□□□□□ -0.66
USP46-204ENST00000503060 YPEL5P62699 121 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 SLAMF1Q13291 335 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 CCINQ13939 588 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 CDONQ4KMG0 1287 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 MRM1Q6IN84 353 aaKnown RBP10.93□□□□□ -0.66
USP46-204ENST00000503060 REEP3Q6NUK4 255 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 PAQR7Q86WK9 346 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 CLVS1Q8IUQ0 354 aaPredicted RBP10.93□□□□□ -0.66
USP46-204ENST00000503060 ARMC8Q8IUR7 673 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 SETD9Q8NE22 299 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 OR8K5Q8NH50 307 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 PSMA8Q8TAA3 256 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 GEMIN6Q8WXD5 167 aaKnown RBP10.93□□□□□ -0.66
USP46-204ENST00000503060 CEP19Q96LK0 163 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 KCNC2Q96PR1 638 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 NEK6Q9HC98 313 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 SLC35C2Q9NQQ7 365 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 EXD2Q9NVH0 621 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 ASB4Q9Y574 426 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 LYVE1Q9Y5Y7 322 aa10.93□□□□□ -0.66
USP46-204ENST00000503060 TRBV23OR9-2A0A075B6M9 112 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 C5orf58C9J3I9 102 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 PRAMEF10O60809 474 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 PFDN1O60925 122 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 ABCB7O75027 752 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 CPNE6O95741 557 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 SEMA4FO95754 770 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 GSTT2P0CG29 244 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 GSTT2BP0CG30 244 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 SELLP14151 372 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 ITGA2P17301 1181 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 AGXTP21549 392 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 CCT3P49368 545 aaKnown RBP10.92□□□□□ -0.66
USP46-204ENST00000503060 IL5RAQ01344 420 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 RAB39AQ14964 217 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 TJAP1Q5JTD0 557 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 ZNF554Q86TJ5 538 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 ACOT4Q8N9L9 421 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 TTC29Q8NA56 475 aaPredicted RBP10.92□□□□□ -0.66
USP46-204ENST00000503060 SLC38A5Q8WUX1 472 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 HMGB4Q8WW32 186 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 AMDHD1Q96NU7 426 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 SRMSQ9H3Y6 488 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 GLIPR2Q9H4G4 154 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 CXorf21Q9HAI6 301 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 TBCCD1Q9NVR7 557 aa10.92□□□□□ -0.66
USP46-204ENST00000503060 APOBEC3BQ9UH17 382 aaKnown RBP10.92□□□□□ -0.66
USP46-204ENST00000503060 EBF1Q9UH73 591 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms