RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 KDM4DQ6B0I6 523 aa20.63■□□□□ 0.89
PTPN13-205ENST00000502971 MFSD12Q6NUT3 480 aa20.63■□□□□ 0.89
PTPN13-205ENST00000502971 CDC73Q6P1J9 531 aa20.63■□□□□ 0.89
PTPN13-205ENST00000502971 GPR32P1Q8NGA4 272 aa20.63■□□□□ 0.89
PTPN13-205ENST00000502971 ZC3H10Q96K80 434 aaKnown RBP20.63■□□□□ 0.89
PTPN13-205ENST00000502971 ZNF354BQ96LW1 612 aa20.63■□□□□ 0.89
PTPN13-205ENST00000502971 PIP5K1AQ99755 562 aa20.63■□□□□ 0.89
PTPN13-205ENST00000502971 EQTNQ9NQ60 294 aa20.63■□□□□ 0.89
PTPN13-205ENST00000502971 NLGN3Q9NZ94 848 aa20.63■□□□□ 0.89
PTPN13-205ENST00000502971 C19orf53Q9UNZ5 99 aaPredicted RBP20.63■□□□□ 0.89
PTPN13-205ENST00000502971 LYVE1Q9Y5Y7 322 aa20.63■□□□□ 0.89
PTPN13-205ENST00000502971 CLIC3O95833 236 aa20.62■□□□□ 0.89
PTPN13-205ENST00000502971 RECKO95980 971 aa20.62■□□□□ 0.89
PTPN13-205ENST00000502971 CHRM4P08173 479 aa20.62■□□□□ 0.89
PTPN13-205ENST00000502971 RNH1P13489 461 aaKnown RBP20.62■□□□□ 0.89
PTPN13-205ENST00000502971 DAPP51397 102 aa20.62■□□□□ 0.89
PTPN13-205ENST00000502971 MAPK10P53779 464 aa20.62■□□□□ 0.89
PTPN13-205ENST00000502971 FUT5Q11128 374 aa20.62■□□□□ 0.89
PTPN13-205ENST00000502971 TTC33Q6PID6 262 aaPredicted RBP20.62■□□□□ 0.89
PTPN13-205ENST00000502971 FAM111BQ6SJ93 734 aa20.62■□□□□ 0.89
PTPN13-205ENST00000502971 ZBTB44Q8NCP5 570 aa20.62■□□□□ 0.89
PTPN13-205ENST00000502971 OR6C4Q8NGE1 309 aa20.62■□□□□ 0.89
PTPN13-205ENST00000502971 ZNF675Q8TD23 568 aa20.62■□□□□ 0.89
PTPN13-205ENST00000502971 ADAMTS15Q8TE58 950 aa20.62■□□□□ 0.89
PTPN13-205ENST00000502971 ANKRD9Q96BM1 317 aaPredicted RBP20.62■□□□□ 0.89
PTPN13-205ENST00000502971 DUSP23Q9BVJ7 150 aa20.62■□□□□ 0.89
PTPN13-205ENST00000502971 ENAMQ9NRM1 1142 aa20.62■□□□□ 0.89
PTPN13-205ENST00000502971 IRAK4Q9NWZ3 460 aa20.62■□□□□ 0.89
PTPN13-205ENST00000502971 GIN1Q9NXP7 522 aa20.62■□□□□ 0.89
PTPN13-205ENST00000502971 TESMINQ9Y4I5 508 aa20.62■□□□□ 0.89
PTPN13-205ENST00000502971 B4GAT1O43505 415 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 JRKO75564 520 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 ITGAMP11215 1152 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 CDH2P19022 906 aaPredicted RBP20.61■□□□□ 0.89
PTPN13-205ENST00000502971 EPHA8P29322 1005 aaPredicted RBP20.61■□□□□ 0.89
PTPN13-205ENST00000502971 SPIBQ01892 262 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 ID2Q02363 134 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 KCNAB2Q13303 367 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 PUM1Q14671 1186 aaKnown RBP eCLIP20.61■□□□□ 0.89
PTPN13-205ENST00000502971 ANGPT1Q15389 498 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 CYP27C1Q4G0S4 372 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 GPAT3Q53EU6 434 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 FHL5Q5TD97 284 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 FAHD1Q6P587 224 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 CYP4Z1Q86W10 505 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 OR4C15Q8NGM1 316 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 OTUB1Q96FW1 271 aaPredicted RBP20.61■□□□□ 0.89
PTPN13-205ENST00000502971 TRNT1Q96Q11 434 aaKnown RBP20.61■□□□□ 0.89
PTPN13-205ENST00000502971 YTHDF1Q9BYJ9 559 aaKnown RBP20.61■□□□□ 0.89
PTPN13-205ENST00000502971 ANKRA2Q9H9E1 313 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 SEMA5BQ9P283 1151 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 KLHL3Q9UH77 587 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 MRPS33Q9Y291 106 aaKnown RBP20.61■□□□□ 0.89
PTPN13-205ENST00000502971 A0A1B0GTQ1 180 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 PRR33A8MZF0 331 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 SLC16A6O15403 523 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 HRO43593 1189 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 PLOD3O60568 738 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 MED26O95402 600 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 SP9P0CG40 484 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 NT5EP21589 574 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 AVPR1BP47901 424 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 HMGA2P52926 109 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 HSD11B2P80365 405 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 GRM7Q14831 915 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 LAPTM4AQ15012 233 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 FAM214AQ32MH5 1076 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 KCTD21Q4G0X4 260 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 ISLR2Q6UXK2 745 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 KANSL1Q7Z3B3 1105 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 ZNF605Q86T29 641 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 OFCC1Q8IZS5 231 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 PIK3C3Q8NEB9 887 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 GIPC3Q8TF64 312 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 MUS81Q96NY9 551 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 KIF17Q9P2E2 1029 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 KCNE3Q9Y6H6 103 aa20.61■□□□□ 0.89
PTPN13-205ENST00000502971 MN1Q10571 1320 aaPredicted RBP20.6■□□□□ 0.89
PTPN13-205ENST00000502971 SLC35E2P0CK97 266 aa20.6■□□□□ 0.89
PTPN13-205ENST00000502971 NELFEP18615 380 aaKnown RBP20.6■□□□□ 0.89
PTPN13-205ENST00000502971 SOX18P35713 384 aa20.6■□□□□ 0.89
PTPN13-205ENST00000502971 IL18R1Q13478 541 aa20.6■□□□□ 0.89
PTPN13-205ENST00000502971 APOFQ13790 326 aa20.6■□□□□ 0.89
PTPN13-205ENST00000502971 PRICKLE4Q2TBC4 344 aa20.6■□□□□ 0.89
PTPN13-205ENST00000502971 HEPHL1Q6MZM0 1159 aa20.6■□□□□ 0.89
PTPN13-205ENST00000502971 ZNF595Q8IYB9 648 aa20.6■□□□□ 0.89
PTPN13-205ENST00000502971 ZNF786Q8N393 782 aa20.6■□□□□ 0.89
PTPN13-205ENST00000502971 ATG16L2Q8NAA4 619 aa20.6■□□□□ 0.89
PTPN13-205ENST00000502971 SLC35A4Q96G79 324 aa20.6■□□□□ 0.89
PTPN13-205ENST00000502971 LOC100130705A0A1B0GUX0 176 aa20.59■□□□□ 0.89
PTPN13-205ENST00000502971 A8MVJ9 347 aa20.59■□□□□ 0.89
PTPN13-205ENST00000502971 H0YIG0 161 aa20.59■□□□□ 0.89
PTPN13-205ENST00000502971 UGT2B11O75310 529 aa20.59■□□□□ 0.89
PTPN13-205ENST00000502971 CLPTM1O96005 669 aa20.59■□□□□ 0.89
PTPN13-205ENST00000502971 PNLIPP16233 465 aa20.59■□□□□ 0.89
PTPN13-205ENST00000502971 YAP1P46937 504 aaKnown RBP20.59■□□□□ 0.89
PTPN13-205ENST00000502971 ARL4DP49703 201 aa20.59■□□□□ 0.89
PTPN13-205ENST00000502971 CDH12P55289 794 aa20.59■□□□□ 0.89
PTPN13-205ENST00000502971 CFHR1Q03591 330 aa20.59■□□□□ 0.89
PTPN13-205ENST00000502971 AMZ1Q400G9 498 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms