RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 PRDM8Q9NQV8 689 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 RHCGQ9UBD6 479 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 PCOLCE2Q9UKZ9 415 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 MUC3AQ02505 3323 aa11.3□□□□□ -0.6
NUP54-202ENST00000502850 A0A0G2JN53 185 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 A0A1W2PR48 441 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 SAGE2PA6NJ88 616 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 DUXAA6NLW8 204 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 SNTNA6NMZ2 147 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 H3BN98 237 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 J3QRK9 145 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 TOR1BO14657 336 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 LGI1O95970 557 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 ASGR2P07307 311 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 STSP08842 583 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 ACADMP11310 421 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 POU1F1P28069 291 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 CD40LGP29965 261 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 C21orf33P30042 268 aaPredicted RBP11.29□□□□□ -0.6
NUP54-202ENST00000502850 IDUAP35475 653 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 LIPAP38571 399 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 NUDT6P53370 316 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 MLLT10P55197 1068 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 LSM3P62310 102 aaKnown RBP11.29□□□□□ -0.6
NUP54-202ENST00000502850 RHAGQ02094 409 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 ZP2Q05996 745 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 SMAD4Q13485 552 aaKnown RBP11.29□□□□□ -0.6
NUP54-202ENST00000502850 SMAD2Q15796 467 aaKnown RBP11.29□□□□□ -0.6
NUP54-202ENST00000502850 ZNF404Q494X3 552 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 ARMCX4Q5H9R4 360 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 NIPAL1Q6NVV3 410 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 PGBD2Q6P3X8 592 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 ASPGQ86U10 573 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 PAQR7Q86WK9 346 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 FBXL6Q8N531 539 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 MCFD2Q8NI22 146 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 ZFPM2Q8WW38 1151 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 KLHL6Q8WZ60 621 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 SIPA1Q96FS4 1042 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 MSLNLQ96KJ4 702 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 DACH2Q96NX9 599 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 FUZQ9BT04 418 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 SLIRPQ9GZT3 109 aaKnown RBP11.29□□□□□ -0.6
NUP54-202ENST00000502850 AICDAQ9GZX7 198 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 KLHL31Q9H511 634 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 FGF22Q9HCT0 170 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 KLHL28Q9NXS3 571 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 CLEC1BQ9P126 229 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 REV1Q9UBZ9 1251 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 FBXW2Q9UKT8 454 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 CES1P1Q9UKY3 287 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 A4GNTQ9UNA3 340 aa11.29□□□□□ -0.6
NUP54-202ENST00000502850 ANTXRLA6NF34 631 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 M0R082 166 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 TAF4O00268 1085 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 SLC31A1O15431 190 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 PROM1O43490 865 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 LATO43561 262 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 ALPPP05187 535 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 HMGN2P05204 90 aaKnown RBP11.28□□□□□ -0.6
NUP54-202ENST00000502850 DRD1P21728 446 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 CERS1P27544 350 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 PEBP1P30086 187 aaKnown RBP11.28□□□□□ -0.6
NUP54-202ENST00000502850 CSTF2P33240 577 aaKnown RBP eCLIP11.28□□□□□ -0.6
NUP54-202ENST00000502850 SOX6P35712 828 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 SLC15A1P46059 708 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 SOX9P48436 509 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 MRPS21P82921 87 aaKnown RBP11.28□□□□□ -0.6
NUP54-202ENST00000502850 TARDBPQ13148 414 aaKnown RBP eCLIP11.28□□□□□ -0.6
NUP54-202ENST00000502850 ITGADQ13349 1161 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 LASP1Q14847 261 aaKnown RBP11.28□□□□□ -0.6
NUP54-202ENST00000502850 SUZ12Q15022 739 aaKnown RBP11.28□□□□□ -0.6
NUP54-202ENST00000502850 OCLNQ16625 522 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 SYT16Q17RD7 645 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 TRIM16LQ309B1 348 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 GPAT3Q53EU6 434 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 TMEM31Q5JXX7 168 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 SLC25A30Q5SVS4 291 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 GDPGP1Q6ZNW5 385 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 AMER3Q8N944 861 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 TOR1AIP2Q8NFQ8 470 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 OR5D16Q8NGK9 328 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 CNRIP1Q96F85 164 aaPredicted RBP11.28□□□□□ -0.6
NUP54-202ENST00000502850 TRNT1Q96Q11 434 aaKnown RBP11.28□□□□□ -0.6
NUP54-202ENST00000502850 NRTNQ99748 197 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 LRFN3Q9BTN0 628 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 SRMSQ9H3Y6 488 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 SLC25A19Q9HC21 320 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 C11orf16Q9NQ32 467 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 KLF15Q9UIH9 416 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 MKLN1Q9UL63 735 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 CFL2Q9Y281 166 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 KLHL20Q9Y2M5 609 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 PLEKHM1Q9Y4G2 1056 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 ATG4BQ9Y4P1 393 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 CORINQ9Y5Q5 1042 aa11.28□□□□□ -0.6
NUP54-202ENST00000502850 A0A1W2PQF6 199 aa11.27□□□□□ -0.6
NUP54-202ENST00000502850 LRRC72A6NJI9 287 aa11.27□□□□□ -0.6
NUP54-202ENST00000502850 C19orf67A6NJJ6 358 aa11.27□□□□□ -0.6
NUP54-202ENST00000502850 CCRL2O00421 344 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms