RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 STX16O14662 325 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 INPPL1O15357 1258 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 FGF10O15520 208 aaPredicted RBP5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 KERAO60938 352 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 SEC22BO75396 215 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 SNAPINO95295 136 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 PF4P02776 101 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 JMJD7P0C870 316 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 CTPS1P17812 591 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 CXCL2P19875 107 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 MST1P26927 711 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 MAP2K3P46734 347 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 RIDAP52758 137 aaKnown RBP5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 RPP38P78345 283 aaKnown RBP5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 SKP2Q13309 424 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 KRR1Q13601 381 aaKnown RBP5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 TRAM2Q15035 370 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 MICAQ29983 383 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 POM121L1PQ3SYA9 428 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 C1orf185Q5T7R7 199 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 PYHIN1Q6K0P9 492 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 BCDIN3DQ7Z5W3 292 aaKnown RBP5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 PIM3Q86V86 326 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 SNX33Q8WV41 574 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 CNOT9Q92600 299 aaKnown RBP5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 GTF3AQ92664 365 aaKnown RBP5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 CHFRQ96EP1 664 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 SENP5Q96HI0 755 aaPredicted RBP5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 DIRAS2Q96HU8 199 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 MEGF10Q96KG7 1140 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 COQ10AQ96MF6 247 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 TMEM68Q96MH6 324 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 PKMYT1Q99640 499 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 APOL4Q9BPW4 351 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 RBM4BQ9BQ04 359 aaKnown RBP5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 RBM4Q9BWF3 364 aaKnown RBP5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 ABCG8Q9H221 673 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 SLC6A15Q9H2J7 730 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 TCF7L1Q9HCS4 588 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 C14orf105Q9NVL8 296 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 SPG21Q9NZD8 308 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 YIPF1Q9Y548 306 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 SIP14410 1827 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 PRAMEF33A0A0G2JMD5 474 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 FAM234BA2RU67 622 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 OR6C68A6NDL8 312 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 EFCAB10A6NFE3 127 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 FABP12A6NFH5 140 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 QSOX1O00391 747 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 ABCD4O14678 606 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 MATN3O15232 486 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 COCHO43405 550 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 MAFKO60675 156 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 PRAMEF10O60809 474 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 SEMA7AO75326 666 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 PDE9AO76083 593 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 SUPT7LO94864 414 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 CLDN20P56880 219 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 EEF1A1P68104 462 aaKnown RBP5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 EEF1A2Q05639 463 aaKnown RBP5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 GTF2H3Q13889 308 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 ERV3-1Q14264 604 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 EEF1A1P5Q5VTE0 462 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 LRRC66Q68CR7 880 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 SLC25A25Q6KCM7 469 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 SLC27A4Q6P1M0 643 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 ASB18Q6ZVZ8 466 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 USP53Q70EK8 1073 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 C12orf40Q86WS4 652 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 ARHGAP12Q8IWW6 846 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 TTC29Q8NA56 475 aaPredicted RBP5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 OR52K2Q8NGK3 314 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 MRPS31Q92665 395 aaKnown RBP5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 MRPL38Q96DV4 380 aaKnown RBP5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 ZSWIM3Q96MP5 696 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 SLC22A12Q96S37 553 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 VRK1Q99986 396 aaPredicted RBP5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 UNKLQ9H9P5 680 aaKnown RBP5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 SLC28A3Q9HAS3 691 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 PDE7BQ9NP56 450 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 DECR2Q9NUI1 292 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 DNAJB11Q9UBS4 358 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 PLEKHB1Q9UF11 243 aaPredicted RBP5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 BTNL2Q9UIR0 455 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 ENTPD4Q9Y227 616 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 SLC9A8Q9Y2E8 581 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 TPRKBQ9Y3C4 175 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 FKBP7Q9Y680 259 aa5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 CFAP20Q9Y6A4 193 aaKnown RBP5.48□□□□□ -1.53
SOX2-OT-218ENST00000498731 A0A1B0GTQ1 180 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 NUDT19A8MXV4 375 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 SNRNP70P08621 437 aaKnown RBP5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 TSPAN19P0C672 248 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 NR2C1P13056 603 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 HPGDP15428 266 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 CTNNB1P35222 781 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 PBX2P40425 430 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 ACTR1AP61163 376 aa5.47□□□□□ -1.53
SOX2-OT-218ENST00000498731 RPP30P78346 268 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms