RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 SIRT5Q9NXA8 310 aa14.46□□□□□ -0.09
HDAC4-213ENST00000496347 MKS1Q9NXB0 559 aa14.46□□□□□ -0.09
HDAC4-213ENST00000496347 UTS2RQ9UKP6 389 aa14.46□□□□□ -0.09
HDAC4-213ENST00000496347 GRID1Q9ULK0 1009 aa14.46□□□□□ -0.09
HDAC4-213ENST00000496347 LIPGQ9Y5X9 500 aa14.46□□□□□ -0.09
HDAC4-213ENST00000496347 FREM3P0C091 2139 aa14.45□□□□□ -0.1
HDAC4-213ENST00000496347 ATP6AP2A0A1C7CYW4 349 aa14.45□□□□□ -0.1
HDAC4-213ENST00000496347 SMIM23A6NLE4 172 aa14.45□□□□□ -0.1
HDAC4-213ENST00000496347 COPEO14579 308 aa14.45□□□□□ -0.1
HDAC4-213ENST00000496347 ATP6AP2O75787 350 aa14.45□□□□□ -0.1
HDAC4-213ENST00000496347 IL3P08700 152 aa14.45□□□□□ -0.1
HDAC4-213ENST00000496347 CHN1P15882 459 aa14.45□□□□□ -0.1
HDAC4-213ENST00000496347 KRT4P19013 534 aa14.45□□□□□ -0.1
HDAC4-213ENST00000496347 S1PR1P21453 382 aa14.45□□□□□ -0.1
HDAC4-213ENST00000496347 ABCD3P28288 659 aa14.45□□□□□ -0.1
HDAC4-213ENST00000496347 FEN1P39748 380 aaKnown RBP14.45□□□□□ -0.1
HDAC4-213ENST00000496347 PSPHP78330 225 aa14.45□□□□□ -0.1
HDAC4-213ENST00000496347 RAE1P78406 368 aaKnown RBP14.45□□□□□ -0.1
HDAC4-213ENST00000496347 MGAT2Q10469 447 aa14.45□□□□□ -0.1
HDAC4-213ENST00000496347 SP5Q6BEB4 398 aaPredicted RBP14.45□□□□□ -0.1
HDAC4-213ENST00000496347 RIBC1Q8N443 379 aaPredicted RBP14.45□□□□□ -0.1
HDAC4-213ENST00000496347 MARVELD2Q8N4S9 558 aa14.45□□□□□ -0.1
HDAC4-213ENST00000496347 CA5BP1Q8WTZ4 195 aa14.45□□□□□ -0.1
HDAC4-213ENST00000496347 DIO2Q92813 273 aa14.45□□□□□ -0.1
HDAC4-213ENST00000496347 SARAFQ96BY9 339 aa14.45□□□□□ -0.1
HDAC4-213ENST00000496347 ZNF681Q96N22 645 aa14.45□□□□□ -0.1
HDAC4-213ENST00000496347 KCNA7Q96RP8 456 aa14.45□□□□□ -0.1
HDAC4-213ENST00000496347 ANKZF1Q9H8Y5 726 aa14.45□□□□□ -0.1
HDAC4-213ENST00000496347 OXSMQ9NWU1 459 aa14.45□□□□□ -0.1
HDAC4-213ENST00000496347 HEY2Q9UBP5 337 aa14.45□□□□□ -0.1
HDAC4-213ENST00000496347 PRODH2Q9UF12 536 aa14.45□□□□□ -0.1
HDAC4-213ENST00000496347 ZNF639Q9UID6 485 aa14.45□□□□□ -0.1
HDAC4-213ENST00000496347 DLGAP4Q9Y2H0 992 aa14.45□□□□□ -0.1
HDAC4-213ENST00000496347 TIMM22Q9Y584 194 aa14.45□□□□□ -0.1
HDAC4-213ENST00000496347 NPFFR2Q9Y5X5 522 aa14.45□□□□□ -0.1
HDAC4-213ENST00000496347 ARHGAP21Q5T5U3 1957 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 NPIPA2E9PIF3 369 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 NPIPA3F8WFD2 350 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 UBFD1O14562 309 aaKnown RBP14.44□□□□□ -0.1
HDAC4-213ENST00000496347 CRCPO75575 148 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 SNX4O95219 450 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 CELA3AP09093 270 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 NUDT17P0C025 328 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 COX6B1P14854 86 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 NAGAP17050 411 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 ACVR2AP27037 513 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 MAN2A2P49641 1150 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 NAGLUP54802 743 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 FBXW4P57775 412 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 DCAF7P61962 342 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 SLC10A1Q14973 349 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 ZNF628Q5EBL2 1059 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 EMC4Q5J8M3 183 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 LIPMQ5VYY2 423 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 TMEM81Q6P7N7 255 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 NCCRP1Q6ZVX7 275 aaPredicted RBP14.44□□□□□ -0.1
HDAC4-213ENST00000496347 ACAD11Q709F0 780 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 TRIM46Q7Z4K8 759 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 CCDC63Q8NA47 563 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 OR5M3Q8NGP4 307 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 FAM76AQ8TAV0 307 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 SPPL2AQ8TCT8 520 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 ASB5Q8WWX0 329 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 SDCCAG3Q96C92 435 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 APIPQ96GX9 242 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 ITPAQ9BY32 194 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 NXF5Q9H1B4 397 aaKnown RBP14.44□□□□□ -0.1
HDAC4-213ENST00000496347 LDAHQ9H6V9 325 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 PROK2Q9HC23 129 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 ACKR4Q9NPB9 350 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 PFDN4Q9NQP4 134 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 DTX4Q9Y2E6 619 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 PLLPQ9Y342 182 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 CSMD2Q7Z408 3487 aa14.44□□□□□ -0.1
HDAC4-213ENST00000496347 ANKRD17O75179 2603 aaKnown RBP14.44□□□□□ -0.1
HDAC4-213ENST00000496347 POLQO75417 2590 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 TRGV5A0A0B4J1U4 118 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 FRG2CA6NGY1 282 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 WDR1O75083 606 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 TRIM3O75382 744 aaPredicted RBP14.43□□□□□ -0.1
HDAC4-213ENST00000496347 PPM1BO75688 479 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 BCAS2O75934 225 aaPredicted RBP14.43□□□□□ -0.1
HDAC4-213ENST00000496347 RSL1D1O76021 490 aaKnown RBP14.43□□□□□ -0.1
HDAC4-213ENST00000496347 CBX7O95931 251 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 CPA3P15088 417 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 PCSK2P16519 638 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 CHRNB4P30926 498 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 FOXA1P55317 472 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 DUSP2Q05923 314 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 SLC18A2Q05940 514 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 PLCXD2Q0VAA5 305 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 DUSP8Q13202 625 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 EXOSC7Q15024 291 aaKnown RBP14.43□□□□□ -0.1
HDAC4-213ENST00000496347 CDSNQ15517 529 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 LTB4RQ15722 352 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 CEBPEQ15744 281 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 IMPG1Q17R60 797 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 TMEM64Q6YI46 380 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 IKBIPQ70UQ0 350 aa14.43□□□□□ -0.1
HDAC4-213ENST00000496347 GDF7Q7Z4P5 450 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms