RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 PTGFRNQ9P2B2 879 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 SEC14L3Q9UDX4 400 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 C19orf53Q9UNZ5 99 aaPredicted RBP12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 MYRFQ9Y2G1 1151 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 SCN3AQ9NY46 2000 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 CACNA1IQ9P0X4 2223 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 FITM1A5D6W6 292 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 H3BMH7 237 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 SERPINB7O75635 380 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 ZIC2O95409 532 aaPredicted RBP12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 EPPINO95925 133 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 IFNW1P05000 195 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 TFAP2AP05549 437 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 CD1CP29017 333 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 PPP2R1BP30154 601 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 LIMS1P48059 325 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 CDH12P55289 794 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 MAT1AQ00266 395 aaKnown RBP12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 EPS8Q12929 822 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 RNF220Q5VTB9 566 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 DGAT2L6Q6ZPD8 337 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 RBM45Q8IUH3 476 aaKnown RBP12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 C1orf210Q8IVY1 113 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 ZNF786Q8N393 782 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 BBS10Q8TAM1 723 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 QRSL1Q9H0R6 528 aaKnown RBP12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 ACER3Q9NUN7 267 aa12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 DNAAF2Q9NVR5 837 aaKnown RBP12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 TMEM184BQ9Y519 407 aaPredicted RBP12.81□□□□□ -0.36
SPTBN1-205ENST00000496323 TGFBR3LH3BV60 316 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 JRKO75564 520 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 NSA2O95478 260 aaKnown RBP12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 CT62P0C5K7 136 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 ETS2P15036 469 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 ATP6V1B1P15313 513 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 EPHA8P29322 1005 aaPredicted RBP12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 GPR3P46089 330 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 SEPHS1P49903 392 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 SPIBQ01892 262 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 NDUFA9Q16795 377 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 SYT16Q17RD7 645 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 PRICKLE4Q2TBC4 344 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 RFX4Q33E94 735 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 INAVAQ3KP66 663 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 TTC23Q5W5X9 447 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 HEPHL1Q6MZM0 1159 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 CDC73Q6P1J9 531 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 TTC33Q6PID6 262 aaPredicted RBP12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 LACC1Q8IV20 430 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 PIK3C3Q8NEB9 887 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 PROX1Q92786 737 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 ZG16BQ96DA0 208 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 ZNF354BQ96LW1 612 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 SLC38A1Q9H2H9 487 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 CLK4Q9HAZ1 481 aaKnown RBP12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 GIN1Q9NXP7 522 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 MAT2BQ9NZL9 334 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 KCND3Q9UK17 655 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 SPEGQ15772 3267 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 A0A0G2JPF8 293 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 A0A1B0GTQ1 180 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 LOC100130705A0A1B0GUX0 176 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 TRIM64A6NGJ6 449 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 HNRNPCL2B2RXH8 293 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 HNRNPCL3B7ZW38 293 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 SLC16A6O15403 523 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 DUX1O43812 170 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 PLOD3O60568 738 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 HNRNPCL4P0DMR1 293 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 RHCEP18577 417 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 HMGA2P52926 109 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 RAD23AP54725 363 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 CHRNEQ04844 493 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 GANABQ14697 944 aaKnown RBP12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 EXOC3L2Q2M3D2 409 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 GPAT3Q53EU6 434 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 EXOSC6Q5RKV6 272 aaKnown RBP12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 GARNL3Q5VVW2 1013 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 PRAMEF8Q5VWM4 474 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 PRAMEF7Q5VXH5 474 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 TCTN3Q6NUS6 607 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 KRT73Q86Y46 540 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 ATG16L2Q8NAA4 619 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 TSPAN14Q8NG11 270 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 CTHRC1Q96CG8 243 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 PEX11GQ96HA9 241 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 TRNT1Q96Q11 434 aaKnown RBP12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 RLIMQ9NVW2 624 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 NLGN3Q9NZ94 848 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 SEMA5BQ9P283 1151 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 RHCGQ9UBD6 479 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 PCDHGA8Q9Y5G5 932 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 CLDN16Q9Y5I7 305 aa12.8□□□□□ -0.36
SPTBN1-205ENST00000496323 DSPPQ9NZW4 1301 aa12.79□□□□□ -0.36
SPTBN1-205ENST00000496323 A0A087WV62 115 aa12.79□□□□□ -0.36
SPTBN1-205ENST00000496323 FCMRO60667 390 aa12.79□□□□□ -0.36
SPTBN1-205ENST00000496323 CLPTM1O96005 669 aa12.79□□□□□ -0.36
SPTBN1-205ENST00000496323 ACP2P11117 423 aa12.79□□□□□ -0.36
SPTBN1-205ENST00000496323 ITGAMP11215 1152 aa12.79□□□□□ -0.36
SPTBN1-205ENST00000496323 NT5EP21589 574 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms