RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 TNFRSF10DQ9UBN6 386 aa11.7□□□□□ -0.54
PTPRF-214ENST00000496043 TBK1Q9UHD2 729 aa11.7□□□□□ -0.54
PTPRF-214ENST00000496043 ZNF639Q9UID6 485 aa11.7□□□□□ -0.54
PTPRF-214ENST00000496043 PCDHGB3Q9Y5G1 929 aa11.7□□□□□ -0.54
PTPRF-214ENST00000496043 ZNF407Q9C0G0 2248 aa11.7□□□□□ -0.54
PTPRF-214ENST00000496043 PKDREJQ9NTG1 2253 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 SERTM1A2A2V5 107 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 NKX2-6A6NCS4 301 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 LRRC3CA6NJW4 275 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 FAM90A27PA6NNH2 459 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 FOXO6A8MYZ6 492 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 FAM47E-STBD1D6RA91 191 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 CDH16O75309 829 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 TRAPPC6AO75865 159 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 BCAS2O75934 225 aaPredicted RBP11.69□□□□□ -0.54
PTPRF-214ENST00000496043 TOXO94900 526 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 LRATO95237 230 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 ENO1P06733 434 aaKnown RBP11.69□□□□□ -0.54
PTPRF-214ENST00000496043 ABCB1P08183 1280 aaPredicted RBP11.69□□□□□ -0.54
PTPRF-214ENST00000496043 CHN1P15882 459 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 CAPN3P20807 821 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 GPX3P22352 226 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 ELAVL4P26378 380 aaKnown RBP11.69□□□□□ -0.54
PTPRF-214ENST00000496043 GDF1P27539 372 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 CASP3P42574 277 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 ZFP36L2P47974 494 aaKnown RBP11.69□□□□□ -0.54
PTPRF-214ENST00000496043 TRPC1P48995 793 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 NAA20P61599 178 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 DCAF7P61962 342 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 LCP2Q13094 533 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 TRMT12Q53H54 448 aaKnown RBP11.69□□□□□ -0.54
PTPRF-214ENST00000496043 TCHHL1Q5QJ38 904 aaPredicted RBP11.69□□□□□ -0.54
PTPRF-214ENST00000496043 C1orf185Q5T7R7 199 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 RTL6Q6ICC9 239 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 NUP54Q7Z3B4 507 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 CCDC116Q8IYX3 515 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 PRR22Q8IZ63 422 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 SAMD14Q8IZD0 417 aaPredicted RBP11.69□□□□□ -0.54
PTPRF-214ENST00000496043 MMP21Q8N119 569 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 CCNYL1Q8N7R7 359 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 EIF1ADQ8N9N8 165 aaKnown RBP11.69□□□□□ -0.54
PTPRF-214ENST00000496043 ACBD4Q8NC06 268 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 ADCY4Q8NFM4 1077 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 CTHRC1Q96CG8 243 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 LCORQ96JN0 433 aaPredicted RBP11.69□□□□□ -0.54
PTPRF-214ENST00000496043 ZNF597Q96LX8 424 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 ZNF681Q96N22 645 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 RILPQ96NA2 401 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 TREX2Q9BQ50 279 aaPredicted RBP11.69□□□□□ -0.54
PTPRF-214ENST00000496043 NXF5Q9H1B4 397 aaKnown RBP11.69□□□□□ -0.54
PTPRF-214ENST00000496043 PFDN4Q9NQP4 134 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 SPRR3Q9UBC9 169 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 PRODH2Q9UF12 536 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 UTS2RQ9UKP6 389 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 DLGAP4Q9Y2H0 992 aa11.69□□□□□ -0.54
PTPRF-214ENST00000496043 EML6Q6ZMW3 1958 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 GNG14A0A1W2PPG7 69 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 A0A1W2PPM1 405 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 AHRRA9YTQ3 701 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 ACOX3O15254 700 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 PCDH7O60245 1069 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 PPM1BO75688 479 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 MYL2P10916 166 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 DRD5P21918 477 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 ABCD3P28288 659 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 PPICP45877 212 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 CCT5P48643 541 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 MASP1P48740 699 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 BTKQ06187 659 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 ACSM2AQ08AH3 577 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 HEPACAMQ14CZ8 416 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 EXOSC7Q15024 291 aaKnown RBP11.68□□□□□ -0.54
PTPRF-214ENST00000496043 SPIN4Q56A73 249 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 ACSM2BQ68CK6 577 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 OR52R1Q8NGF1 315 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 C16orf78Q8WTQ4 265 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 MZB1Q8WU39 189 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 CNRIP1Q96F85 164 aaPredicted RBP11.68□□□□□ -0.54
PTPRF-214ENST00000496043 GNRHR2Q96P88 292 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 ACPTQ9BZG2 426 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 SLC6A15Q9H2J7 730 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 EPB41L4BQ9H329 900 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 HEY2Q9UBP5 337 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 GRID1Q9ULK0 1009 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 TIMM22Q9Y584 194 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 FAM215AQ9Y5M1 114 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 DNAJC13O75165 2243 aa11.68□□□□□ -0.54
PTPRF-214ENST00000496043 C15orf38-AP3S2A0A0A6YYH1 394 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 A0A0G2JNJ9 132 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 G3V2L1 256 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 H3BQF6 201 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 GLRA3O75311 464 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 CBX7O95931 251 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 IL3P08700 152 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 PCSK2P16519 638 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 ENDOUP21128 410 aaKnown RBP11.67□□□□□ -0.54
PTPRF-214ENST00000496043 MPIP34949 423 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 SOX18P35713 384 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 GSTM5P46439 218 aa11.67□□□□□ -0.54
PTPRF-214ENST00000496043 CDK9P50750 372 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms