RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 ZBTB26Q9HCK0 441 aa20.19■□□□□ 0.82
HDDC3-203ENST00000494993 AHSPQ9NZD4 102 aa20.19■□□□□ 0.82
HDDC3-203ENST00000494993 PCTPQ9UKL6 214 aa20.19■□□□□ 0.82
HDDC3-203ENST00000494993 CAMK2AQ9UQM7 478 aa20.19■□□□□ 0.82
HDDC3-203ENST00000494993 DIAPH2O60879 1101 aa20.18■□□□□ 0.82
HDDC3-203ENST00000494993 KRT15P19012 456 aa20.18■□□□□ 0.82
HDDC3-203ENST00000494993 S1PR1P21453 382 aa20.18■□□□□ 0.82
HDDC3-203ENST00000494993 PHBP35232 272 aa20.18■□□□□ 0.82
HDDC3-203ENST00000494993 TOMM20Q15388 145 aa20.18■□□□□ 0.82
HDDC3-203ENST00000494993 EIPR1Q53HC9 387 aa20.18■□□□□ 0.82
HDDC3-203ENST00000494993 CCNYL2Q5T2Q4 361 aa20.18■□□□□ 0.82
HDDC3-203ENST00000494993 ZNF572Q7Z3I7 529 aaPredicted RBP20.18■□□□□ 0.82
HDDC3-203ENST00000494993 TGIF2LYQ8IUE0 185 aa20.18■□□□□ 0.82
HDDC3-203ENST00000494993 ANP32BQ92688 251 aaKnown RBP20.18■□□□□ 0.82
HDDC3-203ENST00000494993 NSUN5Q96P11 429 aaKnown RBP20.18■□□□□ 0.82
HDDC3-203ENST00000494993 UGT2B28Q9BY64 529 aa20.18■□□□□ 0.82
HDDC3-203ENST00000494993 ACSS3Q9H6R3 686 aa20.18■□□□□ 0.82
HDDC3-203ENST00000494993 ZDHHC18Q9NUE0 388 aa20.18■□□□□ 0.82
HDDC3-203ENST00000494993 CBLCQ9ULV8 474 aa20.18■□□□□ 0.82
HDDC3-203ENST00000494993 TMCO1Q9UM00 188 aa20.18■□□□□ 0.82
HDDC3-203ENST00000494993 DTX4Q9Y2E6 619 aa20.18■□□□□ 0.82
HDDC3-203ENST00000494993 STX16-NPEPL1H3BU86 382 aa20.17■□□□□ 0.82
HDDC3-203ENST00000494993 STX16O14662 325 aa20.17■□□□□ 0.82
HDDC3-203ENST00000494993 GNB5O14775 395 aa20.17■□□□□ 0.82
HDDC3-203ENST00000494993 CDH16O75309 829 aa20.17■□□□□ 0.82
HDDC3-203ENST00000494993 ABCB1P08183 1280 aaPredicted RBP20.17■□□□□ 0.82
HDDC3-203ENST00000494993 RBP1P09455 135 aa20.17■□□□□ 0.82
HDDC3-203ENST00000494993 BMP7P18075 431 aa20.17■□□□□ 0.82
HDDC3-203ENST00000494993 PTPN6P29350 595 aa20.17■□□□□ 0.82
HDDC3-203ENST00000494993 SLC7A5Q01650 507 aa20.17■□□□□ 0.82
HDDC3-203ENST00000494993 IFT88Q13099 833 aa20.17■□□□□ 0.82
HDDC3-203ENST00000494993 CEBPEQ15744 281 aa20.17■□□□□ 0.82
HDDC3-203ENST00000494993 KRTAP21-3Q3LHN1 58 aa20.17■□□□□ 0.82
HDDC3-203ENST00000494993 GGTA1PQ4G0N0 100 aa20.17■□□□□ 0.82
HDDC3-203ENST00000494993 WIPI1Q5MNZ9 446 aaPredicted RBP20.17■□□□□ 0.82
HDDC3-203ENST00000494993 DCST1Q5T197 706 aa20.17■□□□□ 0.82
HDDC3-203ENST00000494993 UBAP2Q5T6F2 1119 aaKnown RBP20.17■□□□□ 0.82
HDDC3-203ENST00000494993 TIGD3Q6B0B8 471 aa20.17■□□□□ 0.82
HDDC3-203ENST00000494993 CDC20BQ86Y33 519 aa20.17■□□□□ 0.82
HDDC3-203ENST00000494993 VWA5B2Q8N398 1253 aa20.17■□□□□ 0.82
HDDC3-203ENST00000494993 METTL4Q8N3J2 472 aa20.17■□□□□ 0.82
HDDC3-203ENST00000494993 GOT1L1Q8NHS2 421 aaPredicted RBP20.17■□□□□ 0.82
HDDC3-203ENST00000494993 WDYHV1Q96HA8 205 aa20.17■□□□□ 0.82
HDDC3-203ENST00000494993 NINJ2Q9NZG7 142 aa20.17■□□□□ 0.82
HDDC3-203ENST00000494993 CES1P1Q9UKY3 287 aa20.17■□□□□ 0.82
HDDC3-203ENST00000494993 PLEKHA6Q9Y2H5 1048 aa20.17■□□□□ 0.82
HDDC3-203ENST00000494993 PCDHA9Q9Y5H5 950 aa20.17■□□□□ 0.82
HDDC3-203ENST00000494993 NAV3Q8IVL0 2385 aa20.16■□□□□ 0.82
HDDC3-203ENST00000494993 MBD3L4A6NDZ8 208 aaPredicted RBP20.16■□□□□ 0.82
HDDC3-203ENST00000494993 MBD3L3A6NE82 208 aaPredicted RBP20.16■□□□□ 0.82
HDDC3-203ENST00000494993 MBD3L5A6NJ08 208 aaPredicted RBP20.16■□□□□ 0.82
HDDC3-203ENST00000494993 CD8B2A6NJW9 211 aa20.16■□□□□ 0.82
HDDC3-203ENST00000494993 PPM1BO75688 479 aa20.16■□□□□ 0.82
HDDC3-203ENST00000494993 NAGAP17050 411 aa20.16■□□□□ 0.82
HDDC3-203ENST00000494993 DNASE1P24855 282 aa20.16■□□□□ 0.82
HDDC3-203ENST00000494993 TACR1P25103 407 aa20.16■□□□□ 0.82
HDDC3-203ENST00000494993 MAGEA12P43365 314 aa20.16■□□□□ 0.82
HDDC3-203ENST00000494993 MAPK12P53778 367 aa20.16■□□□□ 0.82
HDDC3-203ENST00000494993 NNATQ16517 81 aa20.16■□□□□ 0.82
HDDC3-203ENST00000494993 PRICKLE4Q2TBC4 344 aa20.16■□□□□ 0.82
HDDC3-203ENST00000494993 SLC48A1Q6P1K1 146 aa20.16■□□□□ 0.82
HDDC3-203ENST00000494993 TMEM81Q6P7N7 255 aa20.16■□□□□ 0.82
HDDC3-203ENST00000494993 FAM111BQ6SJ93 734 aa20.16■□□□□ 0.82
HDDC3-203ENST00000494993 COMMD6Q7Z4G1 85 aa20.16■□□□□ 0.82
HDDC3-203ENST00000494993 OR1J4Q8NGS1 313 aa20.16■□□□□ 0.82
HDDC3-203ENST00000494993 MBD3L2Q8NHZ7 208 aaPredicted RBP20.16■□□□□ 0.82
HDDC3-203ENST00000494993 TRPC4APQ8TEL6 797 aa20.16■□□□□ 0.82
HDDC3-203ENST00000494993 ABTB1Q969K4 478 aaPredicted RBP20.16■□□□□ 0.82
HDDC3-203ENST00000494993 ISL2Q96A47 359 aa20.16■□□□□ 0.82
HDDC3-203ENST00000494993 TRIB1Q96RU8 372 aa20.16■□□□□ 0.82
HDDC3-203ENST00000494993 BRINP2Q9C0B6 783 aa20.16■□□□□ 0.82
HDDC3-203ENST00000494993 METTL7AQ9H8H3 244 aa20.16■□□□□ 0.82
HDDC3-203ENST00000494993 MAT2BQ9NZL9 334 aa20.16■□□□□ 0.82
HDDC3-203ENST00000494993 XPR1Q9UBH6 696 aa20.16■□□□□ 0.82
HDDC3-203ENST00000494993 EDARQ9UNE0 448 aa20.16■□□□□ 0.82
HDDC3-203ENST00000494993 CFL2Q9Y281 166 aa20.16■□□□□ 0.82
HDDC3-203ENST00000494993 C1orf226A1L170 272 aa20.15■□□□□ 0.82
HDDC3-203ENST00000494993 GOLGA6L10A6NI86 522 aa20.15■□□□□ 0.82
HDDC3-203ENST00000494993 SMIM24O75264 130 aa20.15■□□□□ 0.82
HDDC3-203ENST00000494993 GUCY1B2O75343 617 aa20.15■□□□□ 0.82
HDDC3-203ENST00000494993 ETF1P62495 437 aaKnown RBP20.15■□□□□ 0.82
HDDC3-203ENST00000494993 MGAT2Q10469 447 aa20.15■□□□□ 0.82
HDDC3-203ENST00000494993 MAP4K2Q12851 820 aa20.15■□□□□ 0.82
HDDC3-203ENST00000494993 DAZAP2Q15038 168 aaPredicted RBP20.15■□□□□ 0.82
HDDC3-203ENST00000494993 SGO1Q5FBB7 561 aa20.15■□□□□ 0.82
HDDC3-203ENST00000494993 C8orf74Q6P047 294 aa20.15■□□□□ 0.82
HDDC3-203ENST00000494993 ANGPTL8Q6UXH0 198 aa20.15■□□□□ 0.82
HDDC3-203ENST00000494993 SYT10Q6XYQ8 523 aa20.15■□□□□ 0.82
HDDC3-203ENST00000494993 MILR1Q7Z6M3 343 aa20.15■□□□□ 0.82
HDDC3-203ENST00000494993 FAM83FQ8NEG4 500 aaPredicted RBP20.15■□□□□ 0.82
HDDC3-203ENST00000494993 OR4F6Q8NGB9 312 aa20.15■□□□□ 0.82
HDDC3-203ENST00000494993 HGDQ93099 445 aa20.15■□□□□ 0.82
HDDC3-203ENST00000494993 ITPAQ9BY32 194 aa20.15■□□□□ 0.82
HDDC3-203ENST00000494993 EPB41L4BQ9H329 900 aa20.15■□□□□ 0.82
HDDC3-203ENST00000494993 ELOVL6Q9H5J4 265 aa20.15■□□□□ 0.82
HDDC3-203ENST00000494993 CALHM2Q9HA72 323 aa20.15■□□□□ 0.82
HDDC3-203ENST00000494993 FETUBQ9UGM5 382 aa20.15■□□□□ 0.82
HDDC3-203ENST00000494993 BCAP29Q9UHQ4 241 aa20.15■□□□□ 0.82
HDDC3-203ENST00000494993 ZNF639Q9UID6 485 aa20.15■□□□□ 0.82
HDDC3-203ENST00000494993 SLC12A4Q9UP95 1085 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms