RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 C6orf163Q5TEZ5 329 aa8.81□□□□□ -1
MSH5-218ENST00000494646 RTL6Q6ICC9 239 aa8.81□□□□□ -1
MSH5-218ENST00000494646 B3GNT6Q6ZMB0 384 aa8.81□□□□□ -1
MSH5-218ENST00000494646 GPRIN3Q6ZVF9 776 aa8.81□□□□□ -1
MSH5-218ENST00000494646 ACAD11Q709F0 780 aa8.81□□□□□ -1
MSH5-218ENST00000494646 LIX1LQ8IVB5 337 aa8.81□□□□□ -1
MSH5-218ENST00000494646 FBXW8Q8N3Y1 598 aa8.81□□□□□ -1
MSH5-218ENST00000494646 LIX1Q8N485 282 aa8.81□□□□□ -1
MSH5-218ENST00000494646 LRRN4CLQ8ND94 238 aa8.81□□□□□ -1
MSH5-218ENST00000494646 CHTF18Q8WVB6 975 aa8.81□□□□□ -1
MSH5-218ENST00000494646 SARAFQ96BY9 339 aa8.81□□□□□ -1
MSH5-218ENST00000494646 KLHL29Q96CT2 875 aa8.81□□□□□ -1
MSH5-218ENST00000494646 MTBPQ96DY7 904 aa8.81□□□□□ -1
MSH5-218ENST00000494646 LURAP1Q96LR2 239 aa8.81□□□□□ -1
MSH5-218ENST00000494646 GNRHR2Q96P88 292 aa8.81□□□□□ -1
MSH5-218ENST00000494646 KCNA7Q96RP8 456 aa8.81□□□□□ -1
MSH5-218ENST00000494646 SPOCK3Q9BQ16 436 aa8.81□□□□□ -1
MSH5-218ENST00000494646 TTYH2Q9BSA4 534 aa8.81□□□□□ -1
MSH5-218ENST00000494646 ENKD1Q9H0I2 346 aa8.81□□□□□ -1
MSH5-218ENST00000494646 NXF5Q9H1B4 397 aaKnown RBP8.81□□□□□ -1
MSH5-218ENST00000494646 SLC6A15Q9H2J7 730 aa8.81□□□□□ -1
MSH5-218ENST00000494646 BRF2Q9HAW0 419 aa8.81□□□□□ -1
MSH5-218ENST00000494646 KCNJ16Q9NPI9 418 aa8.81□□□□□ -1
MSH5-218ENST00000494646 HEY2Q9UBP5 337 aa8.81□□□□□ -1
MSH5-218ENST00000494646 DTX4Q9Y2E6 619 aa8.81□□□□□ -1
MSH5-218ENST00000494646 FAM215AQ9Y5M1 114 aa8.81□□□□□ -1
MSH5-218ENST00000494646 KIAA1549Q9HCM3 1950 aa8.81□□□□□ -1
MSH5-218ENST00000494646 TEP1Q99973 2627 aaKnown RBP8.8□□□□□ -1
MSH5-218ENST00000494646 MAP1AP78559 2803 aaPredicted RBP8.8□□□□□ -1
MSH5-218ENST00000494646 A0A0G2JNJ9 132 aa8.8□□□□□ -1
MSH5-218ENST00000494646 OR14I1A6ND48 311 aa8.8□□□□□ -1
MSH5-218ENST00000494646 LRRC3CA6NJW4 275 aa8.8□□□□□ -1
MSH5-218ENST00000494646 GNB5O14775 395 aa8.8□□□□□ -1
MSH5-218ENST00000494646 HCN1O60741 890 aa8.8□□□□□ -1
MSH5-218ENST00000494646 TOXO94900 526 aa8.8□□□□□ -1
MSH5-218ENST00000494646 KRT6AP02538 564 aa8.8□□□□□ -1
MSH5-218ENST00000494646 KRT6BP04259 564 aa8.8□□□□□ -1
MSH5-218ENST00000494646 IL3P08700 152 aa8.8□□□□□ -1
MSH5-218ENST00000494646 KRT15P19012 456 aa8.8□□□□□ -1
MSH5-218ENST00000494646 CSNK2A2P19784 350 aaPredicted RBP8.8□□□□□ -1
MSH5-218ENST00000494646 ENDOUP21128 410 aaKnown RBP8.8□□□□□ -1
MSH5-218ENST00000494646 GPX3P22352 226 aa8.8□□□□□ -1
MSH5-218ENST00000494646 GDF1P27539 372 aa8.8□□□□□ -1
MSH5-218ENST00000494646 SOX18P35713 384 aa8.8□□□□□ -1
MSH5-218ENST00000494646 ADH7P40394 386 aa8.8□□□□□ -1
MSH5-218ENST00000494646 KRT6CP48668 564 aa8.8□□□□□ -1
MSH5-218ENST00000494646 HTR6P50406 440 aa8.8□□□□□ -1
MSH5-218ENST00000494646 PRKAA2P54646 552 aa8.8□□□□□ -1
MSH5-218ENST00000494646 NRG3P56975 720 aa8.8□□□□□ -1
MSH5-218ENST00000494646 RAE1P78406 368 aaKnown RBP8.8□□□□□ -1
MSH5-218ENST00000494646 MRPS35P82673 323 aaKnown RBP8.8□□□□□ -1
MSH5-218ENST00000494646 HMGCS1Q01581 520 aa8.8□□□□□ -1
MSH5-218ENST00000494646 TLE4Q04727 773 aa8.8□□□□□ -1
MSH5-218ENST00000494646 MAP4K2Q12851 820 aa8.8□□□□□ -1
MSH5-218ENST00000494646 DUSP8Q13202 625 aa8.8□□□□□ -1
MSH5-218ENST00000494646 RASA2Q15283 850 aa8.8□□□□□ -1
MSH5-218ENST00000494646 C10orf62Q5T681 223 aaPredicted RBP8.8□□□□□ -1
MSH5-218ENST00000494646 DND1Q8IYX4 353 aaKnown RBP8.8□□□□□ -1
MSH5-218ENST00000494646 CCNYL1Q8N7R7 359 aa8.8□□□□□ -1
MSH5-218ENST00000494646 OR7G1Q8NGA0 311 aa8.8□□□□□ -1
MSH5-218ENST00000494646 OR52R1Q8NGF1 315 aa8.8□□□□□ -1
MSH5-218ENST00000494646 SPPL2AQ8TCT8 520 aa8.8□□□□□ -1
MSH5-218ENST00000494646 CNRIP1Q96F85 164 aaPredicted RBP8.8□□□□□ -1
MSH5-218ENST00000494646 APIPQ96GX9 242 aa8.8□□□□□ -1
MSH5-218ENST00000494646 RILPQ96NA2 401 aa8.8□□□□□ -1
MSH5-218ENST00000494646 ITPAQ9BY32 194 aa8.8□□□□□ -1
MSH5-218ENST00000494646 TXLNGYQ9BZA5 131 aa8.8□□□□□ -1
MSH5-218ENST00000494646 EPB41L4BQ9H329 900 aa8.8□□□□□ -1
MSH5-218ENST00000494646 ZNF703Q9H7S9 590 aaPredicted RBP8.8□□□□□ -1
MSH5-218ENST00000494646 ANKRA2Q9H9E1 313 aa8.8□□□□□ -1
MSH5-218ENST00000494646 MID1IP1Q9NPA3 183 aa8.8□□□□□ -1
MSH5-218ENST00000494646 PFDN4Q9NQP4 134 aa8.8□□□□□ -1
MSH5-218ENST00000494646 MAT2BQ9NZL9 334 aa8.8□□□□□ -1
MSH5-218ENST00000494646 EHD3Q9NZN3 535 aa8.8□□□□□ -1
MSH5-218ENST00000494646 Q9UFV3 132 aa8.8□□□□□ -1
MSH5-218ENST00000494646 DCDC2Q9UHG0 476 aa8.8□□□□□ -1
MSH5-218ENST00000494646 UTS2RQ9UKP6 389 aa8.8□□□□□ -1
MSH5-218ENST00000494646 DLGAP4Q9Y2H0 992 aa8.8□□□□□ -1
MSH5-218ENST00000494646 ZNF780BQ9Y6R6 833 aa8.8□□□□□ -1
MSH5-218ENST00000494646 CELSR1Q9NYQ6 3014 aa8.8□□□□□ -1
MSH5-218ENST00000494646 ANKRD17O75179 2603 aaKnown RBP8.79□□□□□ -1
MSH5-218ENST00000494646 C15orf38-AP3S2A0A0A6YYH1 394 aa8.79□□□□□ -1
MSH5-218ENST00000494646 GNG14A0A1W2PPG7 69 aa8.79□□□□□ -1
MSH5-218ENST00000494646 GOLGA6L10A6NI86 522 aa8.79□□□□□ -1
MSH5-218ENST00000494646 SMIM23A6NLE4 172 aa8.79□□□□□ -1
MSH5-218ENST00000494646 FIGNL2A6NMB9 653 aa8.79□□□□□ -1
MSH5-218ENST00000494646 KDM4EB2RXH2 506 aaPredicted RBP8.79□□□□□ -1
MSH5-218ENST00000494646 PCDH7O60245 1069 aa8.79□□□□□ -1
MSH5-218ENST00000494646 TRIM3O75382 744 aaPredicted RBP8.79□□□□□ -1
MSH5-218ENST00000494646 CBX7O95931 251 aa8.79□□□□□ -1
MSH5-218ENST00000494646 SHBGP04278 402 aa8.79□□□□□ -1
MSH5-218ENST00000494646 ABCB1P08183 1280 aaPredicted RBP8.79□□□□□ -1
MSH5-218ENST00000494646 ABCD3P28288 659 aa8.79□□□□□ -1
MSH5-218ENST00000494646 SSTR2P30874 369 aa8.79□□□□□ -1
MSH5-218ENST00000494646 CASP3P42574 277 aa8.79□□□□□ -1
MSH5-218ENST00000494646 SLCO1A2P46721 670 aa8.79□□□□□ -1
MSH5-218ENST00000494646 ZFP36L2P47974 494 aaKnown RBP8.79□□□□□ -1
MSH5-218ENST00000494646 MASP1P48740 699 aa8.79□□□□□ -1
MSH5-218ENST00000494646 FOXA1P55317 472 aa8.79□□□□□ -1
MSH5-218ENST00000494646 WNT3P56703 355 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms