RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 SOD1P00441 154 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 TSPAN19P0C672 248 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 CISD3P0C7P0 127 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 NR2F1P10589 423 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 ACP2P11117 423 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 CD53P19397 219 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 FGF9P31371 208 aaPredicted RBP10.86□□□□□ -0.67
RFC4-214ENST00000494047 GABRA5P31644 462 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 GPC1P35052 558 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 DDOSTP39656 456 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 CASP3P42574 277 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 RAB25P57735 213 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 OR2B6P58173 313 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 PSPHP78330 225 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 SIGLEC14Q08ET2 396 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 TARDBPQ13148 414 aaKnown RBP eCLIP10.86□□□□□ -0.671e-6■■■■□ 22.1
RFC4-214ENST00000494047 SELENBP1Q13228 472 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 GPR50Q13585 617 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 TPBGQ13641 420 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 DSG2Q14126 1118 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 GANABQ14697 944 aaKnown RBP10.86□□□□□ -0.67
RFC4-214ENST00000494047 SLC9A5Q14940 896 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 TRAM1Q15629 374 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 TAB1Q15750 504 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 KCNJ8Q15842 424 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 PLK5Q496M5 336 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 LRRC73Q5JTD7 316 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 PDZK1Q5T2W1 519 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 RSBN1Q5VWQ0 802 aaPredicted RBP10.86□□□□□ -0.67
RFC4-214ENST00000494047 DESI1Q6ICB0 168 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 RPL13AP3Q6NVV1 102 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 SLC27A4Q6P1M0 643 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 TMEM53Q6P2H8 277 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 ZNF852Q6ZMS4 543 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 PRICKLE2Q7Z3G6 844 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 BMP8AQ7Z5Y6 402 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 HORMAD2Q8N7B1 307 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 OR5AK3PQ8NH89 298 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 TMEM163Q8TC26 289 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 ACOT12Q8WYK0 555 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 HTRA1Q92743 480 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 OSTF1Q92882 214 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 UBE2FQ969M7 185 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 TREX2Q9BQ50 279 aaPredicted RBP10.86□□□□□ -0.67
RFC4-214ENST00000494047 TIMM29Q9BSF4 260 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 BTBD1Q9H0C5 482 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 HHATLQ9HCP6 504 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 TMEM184CQ9NVA4 438 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 RABL2AQ9UBK7 228 aaPredicted RBP10.86□□□□□ -0.67
RFC4-214ENST00000494047 RABL2BQ9UNT1 228 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 CCL26Q9Y258 94 aa10.86□□□□□ -0.67
RFC4-214ENST00000494047 MUC22E2RYF6 1773 aaPredicted RBP10.86□□□□□ -0.67
RFC4-214ENST00000494047 TECTAO75443 2155 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 TRBV4-1A0A0J9YWV2 114 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 RGS5O15539 181 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 HLA-DPB1P04440 258 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 CYP17A1P05093 508 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 POU1F1P28069 291 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 SSR2P43308 183 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 CDK5Q00535 292 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 ST3GAL3Q11203 375 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 SLC13A2Q13183 592 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 RIN1Q13671 783 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 PUM1Q14671 1186 aaKnown RBP eCLIP10.85□□□□□ -0.67
RFC4-214ENST00000494047 TRAM2Q15035 370 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 PDGFRLQ15198 375 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 SSX1Q16384 188 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 DUSP7Q16829 419 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 FNDC3BQ53EP0 1204 aaKnown RBP10.85□□□□□ -0.67
RFC4-214ENST00000494047 EIPR1Q53HC9 387 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 HACD4Q5VWC8 232 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 METRNLQ641Q3 311 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 TMEM215Q68D42 235 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 OR4C11Q6IEV9 310 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 MZT2BQ6NZ67 158 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 DEF8Q6ZN54 512 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 RASSF6Q6ZTQ3 369 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 RRM2BQ7LG56 351 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 CDH24Q86UP0 819 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 MMAAQ8IVH4 418 aaKnown RBP10.85□□□□□ -0.67
RFC4-214ENST00000494047 NAT16Q8N8M0 369 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 PSD4Q8NDX1 1056 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 CYB5D2Q8WUJ1 264 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 LRFN3Q9BTN0 628 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 C1QTNF7Q9BXJ2 289 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 ZNF717Q9BY31 904 aaPredicted RBP10.85□□□□□ -0.67
RFC4-214ENST00000494047 HOXD1Q9GZZ0 328 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 KCNN2Q9H2S1 579 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 MVB12BQ9H7P6 319 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 AMBNQ9NP70 447 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 C11orf16Q9NQ32 467 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 SLC35C2Q9NQQ7 365 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 DIABLOQ9NR28 239 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 DEC1Q9P2X7 70 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 ACSL6Q9UKU0 697 aa10.85□□□□□ -0.67
RFC4-214ENST00000494047 A0A0A6YYD5 115 aa10.84□□□□□ -0.67
RFC4-214ENST00000494047 CCDC182A6NF36 153 aa10.84□□□□□ -0.67
RFC4-214ENST00000494047 PRAMEF25A6NGN4 478 aa10.84□□□□□ -0.67
RFC4-214ENST00000494047 ANHXE9PGG2 379 aa10.84□□□□□ -0.67
RFC4-214ENST00000494047 J3KTA2 159 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms