RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 APRTP07741 180 aa2.98□□□□□ -1.93
ITGB1-216ENST00000493758 TNNT3P45378 269 aaPredicted RBP2.98□□□□□ -1.93
ITGB1-216ENST00000493758 KRT6CP48668 564 aa2.98□□□□□ -1.93
ITGB1-216ENST00000493758 SLC7A2P52569 658 aa2.98□□□□□ -1.93
ITGB1-216ENST00000493758 VCPP55072 806 aaKnown RBP2.98□□□□□ -1.93
ITGB1-216ENST00000493758 SGCBQ16585 318 aa2.98□□□□□ -1.93
ITGB1-216ENST00000493758 ISXQ2M1V0 245 aa2.98□□□□□ -1.93
ITGB1-216ENST00000493758 QRICH1Q2TAL8 776 aa2.98□□□□□ -1.93
ITGB1-216ENST00000493758 PAN3Q58A45 887 aaKnown RBP2.98□□□□□ -1.93
ITGB1-216ENST00000493758 MS4A13Q5J8X5 152 aa2.98□□□□□ -1.93
ITGB1-216ENST00000493758 C9orf129Q5T035 196 aaKnown RBP2.98□□□□□ -1.93
ITGB1-216ENST00000493758 LCE3AQ5TA76 89 aa2.98□□□□□ -1.93
ITGB1-216ENST00000493758 APOOLQ6UXV4 268 aa2.98□□□□□ -1.93
ITGB1-216ENST00000493758 OR13F1Q8NGS4 319 aa2.98□□□□□ -1.93
ITGB1-216ENST00000493758 PHYHIPLQ96FC7 376 aa2.98□□□□□ -1.93
ITGB1-216ENST00000493758 IKZF5Q9H5V7 419 aa2.98□□□□□ -1.93
ITGB1-216ENST00000493758 TMEM9Q9P0T7 183 aa2.98□□□□□ -1.93
ITGB1-216ENST00000493758 CLEC4EQ9ULY5 219 aa2.98□□□□□ -1.93
ITGB1-216ENST00000493758 NTNG1Q9Y2I2 539 aa2.98□□□□□ -1.93
ITGB1-216ENST00000493758 RNF115Q9Y4L5 304 aa2.98□□□□□ -1.93
ITGB1-216ENST00000493758 COL16A1Q07092 1604 aaPredicted RBP2.97□□□□□ -1.93
ITGB1-216ENST00000493758 SYNJ2O15056 1496 aa2.97□□□□□ -1.93
ITGB1-216ENST00000493758 PTPRUQ92729 1446 aa2.97□□□□□ -1.93
ITGB1-216ENST00000493758 H0Y9J4 135 aa2.97□□□□□ -1.93
ITGB1-216ENST00000493758 SLC17A2O00624 439 aa2.97□□□□□ -1.93
ITGB1-216ENST00000493758 FMO6PO60774 539 aa2.97□□□□□ -1.93
ITGB1-216ENST00000493758 WNT2P09544 360 aa2.97□□□□□ -1.93
ITGB1-216ENST00000493758 CTNNA1P35221 906 aaKnown RBP2.97□□□□□ -1.93
ITGB1-216ENST00000493758 CTNNB1P35222 781 aa2.97□□□□□ -1.93
ITGB1-216ENST00000493758 HMGCLP35914 325 aa2.97□□□□□ -1.93
ITGB1-216ENST00000493758 ZNF131P52739 623 aa2.97□□□□□ -1.93
ITGB1-216ENST00000493758 HERV-K104P63124 156 aa2.97□□□□□ -1.93
ITGB1-216ENST00000493758 ZNF33BQ06732 778 aa2.97□□□□□ -1.93
ITGB1-216ENST00000493758 TEFQ10587 303 aa2.97□□□□□ -1.93
ITGB1-216ENST00000493758 TSTA3Q13630 321 aaPredicted RBP2.97□□□□□ -1.93
ITGB1-216ENST00000493758 RCN2Q14257 317 aa2.97□□□□□ -1.93
ITGB1-216ENST00000493758 CAPRIN1Q14444 709 aaKnown RBP2.97□□□□□ -1.93
ITGB1-216ENST00000493758 SMU1Q2TAY7 513 aa2.97□□□□□ -1.93
ITGB1-216ENST00000493758 SLC39A12Q504Y0 691 aa2.97□□□□□ -1.93
ITGB1-216ENST00000493758 ADAMTSL5Q6ZMM2 481 aa2.97□□□□□ -1.93
ITGB1-216ENST00000493758 OR4A16Q8NH70 328 aa2.97□□□□□ -1.93
ITGB1-216ENST00000493758 LINC01006Q8NI28 216 aa2.97□□□□□ -1.93
ITGB1-216ENST00000493758 ZNF671Q8TAW3 534 aa2.97□□□□□ -1.93
ITGB1-216ENST00000493758 TFB1MQ8WVM0 346 aaKnown RBP2.97□□□□□ -1.93
ITGB1-216ENST00000493758 C5orf30Q96GV9 206 aa2.97□□□□□ -1.93
ITGB1-216ENST00000493758 ACCSQ96QU6 501 aa2.97□□□□□ -1.93
ITGB1-216ENST00000493758 FAM213AQ9BRX8 229 aa2.97□□□□□ -1.93
ITGB1-216ENST00000493758 C19orf24Q9BVV8 132 aa2.97□□□□□ -1.93
ITGB1-216ENST00000493758 TRPV6Q9H1D0 765 aa2.97□□□□□ -1.93
ITGB1-216ENST00000493758 ARGLU1Q9NWB6 273 aaPredicted RBP2.97□□□□□ -1.93
ITGB1-216ENST00000493758 C5orf51A6NDU8 294 aa2.96□□□□□ -1.94
ITGB1-216ENST00000493758 TRABD2BA6NFA1 517 aa2.96□□□□□ -1.94
ITGB1-216ENST00000493758 EFCAB7A8K855 629 aa2.96□□□□□ -1.94
ITGB1-216ENST00000493758 PDLIM1O00151 329 aa2.96□□□□□ -1.94
ITGB1-216ENST00000493758 BUB1O43683 1085 aa2.96□□□□□ -1.94
ITGB1-216ENST00000493758 NUDT21O43809 227 aaKnown RBP2.96□□□□□ -1.94
ITGB1-216ENST00000493758 TYROBPO43914 113 aa2.96□□□□□ -1.94
ITGB1-216ENST00000493758 PDE5AO76074 875 aa2.96□□□□□ -1.94
ITGB1-216ENST00000493758 REC8O95072 547 aa2.96□□□□□ -1.94
ITGB1-216ENST00000493758 LYPD3O95274 346 aa2.96□□□□□ -1.94
ITGB1-216ENST00000493758 MGMTP16455 207 aa2.96□□□□□ -1.94
ITGB1-216ENST00000493758 FERP16591 822 aa2.96□□□□□ -1.94
ITGB1-216ENST00000493758 ZP3P21754 424 aa2.96□□□□□ -1.94
ITGB1-216ENST00000493758 PRKAR2BP31323 418 aa2.96□□□□□ -1.94
ITGB1-216ENST00000493758 SAA4P35542 130 aa2.96□□□□□ -1.94
ITGB1-216ENST00000493758 TRIM23P36406 574 aa2.96□□□□□ -1.94
ITGB1-216ENST00000493758 XCR1P46094 333 aa2.96□□□□□ -1.94
ITGB1-216ENST00000493758 OR1D4P47884 311 aa2.96□□□□□ -1.94
ITGB1-216ENST00000493758 ARHGDIBP52566 201 aa2.96□□□□□ -1.94
ITGB1-216ENST00000493758 RPS4XP62701 263 aaKnown RBP2.96□□□□□ -1.94
ITGB1-216ENST00000493758 PRKCEQ02156 737 aa2.96□□□□□ -1.94
ITGB1-216ENST00000493758 SMC1AQ14683 1233 aaKnown RBP2.96□□□□□ -1.94
ITGB1-216ENST00000493758 TRADDQ15628 312 aa2.96□□□□□ -1.94
ITGB1-216ENST00000493758 ZNF674Q2M3X9 581 aa2.96□□□□□ -1.94
ITGB1-216ENST00000493758 HIST2H2AA3Q6FI13 130 aa2.96□□□□□ -1.94
ITGB1-216ENST00000493758 TATDN1Q6P1N9 297 aa2.96□□□□□ -1.94
ITGB1-216ENST00000493758 TMEM270Q6UE05 265 aa2.96□□□□□ -1.94
ITGB1-216ENST00000493758 RANBP3LQ86VV4 465 aaPredicted RBP2.96□□□□□ -1.94
ITGB1-216ENST00000493758 APOBEC3FQ8IUX4 373 aaKnown RBP2.96□□□□□ -1.94
ITGB1-216ENST00000493758 RELL2Q8NC24 303 aaPredicted RBP2.96□□□□□ -1.94
ITGB1-216ENST00000493758 VSIG2Q96IQ7 327 aa2.96□□□□□ -1.94
ITGB1-216ENST00000493758 KIR2DL4Q99706 377 aa2.96□□□□□ -1.94
ITGB1-216ENST00000493758 OPN3Q9H1Y3 402 aaPredicted RBP2.96□□□□□ -1.94
ITGB1-216ENST00000493758 RNF41Q9H4P4 317 aaPredicted RBP2.96□□□□□ -1.94
ITGB1-216ENST00000493758 ADGRL4Q9HBW9 690 aa2.96□□□□□ -1.94
ITGB1-216ENST00000493758 NRN1Q9NPD7 142 aa2.96□□□□□ -1.94
ITGB1-216ENST00000493758 PRMT8Q9NR22 394 aaPredicted RBP2.96□□□□□ -1.94
ITGB1-216ENST00000493758 PIGVQ9NUD9 493 aa2.96□□□□□ -1.94
ITGB1-216ENST00000493758 A8MX80 341 aa2.95□□□□□ -1.94
ITGB1-216ENST00000493758 EEF2KO00418 725 aaKnown RBP2.95□□□□□ -1.94
ITGB1-216ENST00000493758 HOXB7P09629 217 aa2.95□□□□□ -1.94
ITGB1-216ENST00000493758 H2AFZP0C0S5 128 aa2.95□□□□□ -1.94
ITGB1-216ENST00000493758 HIST1H2AGP0C0S8 130 aaPredicted RBP2.95□□□□□ -1.94
ITGB1-216ENST00000493758 ACADSBP45954 432 aa2.95□□□□□ -1.94
ITGB1-216ENST00000493758 ALDH3B2P48448 385 aa2.95□□□□□ -1.94
ITGB1-216ENST00000493758 UCP2P55851 309 aa2.95□□□□□ -1.94
ITGB1-216ENST00000493758 CCZ1BP86790 482 aa2.95□□□□□ -1.94
ITGB1-216ENST00000493758 CCZ1P86791 482 aaPredicted RBP2.95□□□□□ -1.94
ITGB1-216ENST00000493758 GPAT3Q53EU6 434 aa2.95□□□□□ -1.94
ITGB1-216ENST00000493758 LUZP1Q86V48 1076 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms